Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 Y_RNA.383-201ENST00000383855 97 ntBASIC2.62□□□□□ -1.99
PCDHGA6Q9Y5G7 MIR196B-201ENST00000384852 84 ntBASIC2.62□□□□□ -1.99
PCDHGA6Q9Y5G7 RNU6-1199P-201ENST00000411249 104 ntBASIC2.62□□□□□ -1.99
PCDHGA6Q9Y5G7 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.62□□□□□ -1.99
PCDHGA6Q9Y5G7 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.62□□□□□ -1.99
PCDHGA6Q9Y5G7 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.62□□□□□ -1.99
PCDHGA6Q9Y5G7 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.62□□□□□ -1.99
PCDHGA6Q9Y5G7 MIR4435-1-201ENST00000582552 80 ntBASIC2.62□□□□□ -1.99
PCDHGA6Q9Y5G7 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.62□□□□□ -1.99
PCDHGA6Q9Y5G7 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
PCDHGA6Q9Y5G7 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
PCDHGA6Q9Y5G7 AL391987.6-201ENST00000305671 199 ntBASIC2.61□□□□□ -1.99
PCDHGA6Q9Y5G7 Y_RNA.136-201ENST00000363444 102 ntBASIC2.61□□□□□ -1.99
PCDHGA6Q9Y5G7 SNORD115-30-201ENST00000364117 82 ntBASIC2.61□□□□□ -1.99
PCDHGA6Q9Y5G7 RNU6-514P-201ENST00000384208 107 ntBASIC2.61□□□□□ -1.99
PCDHGA6Q9Y5G7 RNU11-5P-201ENST00000391216 129 ntBASIC2.61□□□□□ -1.99
PCDHGA6Q9Y5G7 RNU2-52P-201ENST00000410680 190 ntBASIC2.61□□□□□ -1.99
PCDHGA6Q9Y5G7 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.61□□□□□ -1.99
PCDHGA6Q9Y5G7 AL139109.1-201ENST00000455491 297 ntBASIC2.61□□□□□ -1.99
PCDHGA6Q9Y5G7 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.61□□□□□ -1.99
PCDHGA6Q9Y5G7 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.61□□□□□ -1.99
PCDHGA6Q9Y5G7 Y_RNA.668-201ENST00000516233 93 ntBASIC2.61□□□□□ -1.99
PCDHGA6Q9Y5G7 RNU6-1338P-201ENST00000516328 91 ntBASIC2.61□□□□□ -1.99
PCDHGA6Q9Y5G7 SNORA9.3-201ENST00000516383 129 ntBASIC2.61□□□□□ -1.99
PCDHGA6Q9Y5G7 AC062037.2-201ENST00000610137 73 ntBASIC2.61□□□□□ -1.99
PCDHGA6Q9Y5G7 AC010615.1-201ENST00000594254 1764 ntBASIC2.61□□□□□ -1.99
PCDHGA6Q9Y5G7 AC080100.1-201ENST00000624239 5356 ntBASIC2.6□□□□□ -1.99
PCDHGA6Q9Y5G7 MIR340-201ENST00000362125 95 ntBASIC2.6□□□□□ -1.99
PCDHGA6Q9Y5G7 RNU1-112P-201ENST00000364401 164 ntBASIC2.6□□□□□ -1.99
PCDHGA6Q9Y5G7 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.6□□□□□ -1.99
PCDHGA6Q9Y5G7 RNU6-472P-201ENST00000384299 107 ntBASIC2.6□□□□□ -1.99
PCDHGA6Q9Y5G7 MIR215-201ENST00000384858 110 ntBASIC2.6□□□□□ -1.99
PCDHGA6Q9Y5G7 MIR873-201ENST00000401120 77 ntBASIC2.6□□□□□ -1.99
PCDHGA6Q9Y5G7 RNA5SP270-201ENST00000411361 118 ntBASIC2.6□□□□□ -1.99
PCDHGA6Q9Y5G7 AC007064.1-201ENST00000412238 351 ntBASIC2.6□□□□□ -1.99
PCDHGA6Q9Y5G7 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.6□□□□□ -1.99
PCDHGA6Q9Y5G7 SUMO1P4-201ENST00000429430 302 ntBASIC2.6□□□□□ -1.99
PCDHGA6Q9Y5G7 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.6□□□□□ -1.99
PCDHGA6Q9Y5G7 SNORD65B-201ENST00000459126 73 ntBASIC2.6□□□□□ -1.99
PCDHGA6Q9Y5G7 AC003982.1-202ENST00000469928 248 ntBASIC2.6□□□□□ -1.99
PCDHGA6Q9Y5G7 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.6□□□□□ -1.99
PCDHGA6Q9Y5G7 RNU6-436P-201ENST00000516171 114 ntBASIC2.6□□□□□ -1.99
PCDHGA6Q9Y5G7 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.6□□□□□ -1.99
PCDHGA6Q9Y5G7 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.6□□□□□ -1.99
PCDHGA6Q9Y5G7 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.6□□□□□ -1.99
PCDHGA6Q9Y5G7 AL137100.2-201ENST00000555786 315 ntBASIC2.6□□□□□ -1.99
PCDHGA6Q9Y5G7 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.6□□□□□ -1.99
PCDHGA6Q9Y5G7 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.6□□□□□ -1.99
PCDHGA6Q9Y5G7 AL353149.1-201ENST00000610667 244 ntBASIC2.6□□□□□ -1.99
PCDHGA6Q9Y5G7 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
PCDHGA6Q9Y5G7 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
PCDHGA6Q9Y5G7 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.59□□□□□ -1.99
PCDHGA6Q9Y5G7 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
PCDHGA6Q9Y5G7 RNU1-58P-201ENST00000362413 163 ntBASIC2.59□□□□□ -1.99
PCDHGA6Q9Y5G7 RNU6-23P-201ENST00000363283 107 ntBASIC2.59□□□□□ -1.99
PCDHGA6Q9Y5G7 Y_RNA.361-201ENST00000365515 120 ntBASIC2.59□□□□□ -1.99
PCDHGA6Q9Y5G7 Y_RNA.396-201ENST00000383949 103 ntBASIC2.59□□□□□ -1.99
PCDHGA6Q9Y5G7 RNU1-52P-201ENST00000384190 164 ntBASIC2.59□□□□□ -1.99
PCDHGA6Q9Y5G7 Y_RNA.541-201ENST00000384640 113 ntBASIC2.59□□□□□ -1.99
PCDHGA6Q9Y5G7 MIR515-2-201ENST00000384883 83 ntBASIC2.59□□□□□ -1.99
PCDHGA6Q9Y5G7 MIR515-1-201ENST00000384884 83 ntBASIC2.59□□□□□ -1.99
PCDHGA6Q9Y5G7 MT-TW-201ENST00000387382 68 ntBASIC2.59□□□□□ -1.99
PCDHGA6Q9Y5G7 AL031003.1-201ENST00000404229 172 ntBASIC2.59□□□□□ -1.99
PCDHGA6Q9Y5G7 AC011406.1-201ENST00000512440 370 ntBASIC2.59□□□□□ -1.99
PCDHGA6Q9Y5G7 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.59□□□□□ -1.99
PCDHGA6Q9Y5G7 MIR3605-201ENST00000583214 100 ntBASIC2.59□□□□□ -1.99
PCDHGA6Q9Y5G7 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.59□□□□□ -1.99
PCDHGA6Q9Y5G7 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.59□□□□□ -1.99
PCDHGA6Q9Y5G7 CENPCP1-201ENST00000533085 2578 ntBASIC2.59□□□□□ -1.99
PCDHGA6Q9Y5G7 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
PCDHGA6Q9Y5G7 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -2
PCDHGA6Q9Y5G7 SNORA25.1-201ENST00000362326 128 ntBASIC2.58□□□□□ -2
PCDHGA6Q9Y5G7 RNA5SP493-201ENST00000364115 91 ntBASIC2.58□□□□□ -2
PCDHGA6Q9Y5G7 RNU6-1164P-201ENST00000364428 107 ntBASIC2.58□□□□□ -2
PCDHGA6Q9Y5G7 Y_RNA.286-201ENST00000364813 102 ntBASIC2.58□□□□□ -2
PCDHGA6Q9Y5G7 SNORA20B-201ENST00000384220 132 ntBASIC2.58□□□□□ -2
PCDHGA6Q9Y5G7 RNU6-102P-201ENST00000384485 104 ntBASIC2.58□□□□□ -2
PCDHGA6Q9Y5G7 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.58□□□□□ -2
PCDHGA6Q9Y5G7 MIR548H3-201ENST00000408771 118 ntBASIC2.58□□□□□ -2
PCDHGA6Q9Y5G7 AL513328.1-201ENST00000446460 224 ntBASIC2.58□□□□□ -2
PCDHGA6Q9Y5G7 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.58□□□□□ -2
PCDHGA6Q9Y5G7 ATP5J2P3-201ENST00000451550 258 ntBASIC2.58□□□□□ -2
PCDHGA6Q9Y5G7 SNORD127-201ENST00000458892 86 ntBASIC2.58□□□□□ -2
PCDHGA6Q9Y5G7 SERF1AP1-201ENST00000514575 187 ntBASIC2.58□□□□□ -2
PCDHGA6Q9Y5G7 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.58□□□□□ -2
PCDHGA6Q9Y5G7 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.58□□□□□ -2
PCDHGA6Q9Y5G7 AC023157.2-201ENST00000540596 141 ntBASIC2.58□□□□□ -2
PCDHGA6Q9Y5G7 AC078899.2-201ENST00000595282 212 ntBASIC2.58□□□□□ -2
PCDHGA6Q9Y5G7 U2.15-201ENST00000611544 191 ntBASIC2.58□□□□□ -2
PCDHGA6Q9Y5G7 U2.16-201ENST00000613119 191 ntBASIC2.58□□□□□ -2
PCDHGA6Q9Y5G7 U2.12-201ENST00000613778 191 ntBASIC2.58□□□□□ -2
PCDHGA6Q9Y5G7 U2.20-201ENST00000613956 192 ntBASIC2.58□□□□□ -2
PCDHGA6Q9Y5G7 U2.9-201ENST00000615427 191 ntBASIC2.58□□□□□ -2
PCDHGA6Q9Y5G7 U2.11-201ENST00000616345 191 ntBASIC2.58□□□□□ -2
PCDHGA6Q9Y5G7 U2.2-201ENST00000616535 191 ntBASIC2.58□□□□□ -2
PCDHGA6Q9Y5G7 U2.3-201ENST00000617785 191 ntBASIC2.58□□□□□ -2
PCDHGA6Q9Y5G7 U2.19-201ENST00000618602 191 ntBASIC2.58□□□□□ -2
PCDHGA6Q9Y5G7 RNU2-1-201ENST00000618664 191 ntBASIC2.58□□□□□ -2
PCDHGA6Q9Y5G7 U2.6-201ENST00000619225 191 ntBASIC2.58□□□□□ -2
PCDHGA6Q9Y5G7 U2.5-201ENST00000619465 191 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 182 ms