Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RTCBQ9Y3I0 AC009487.2-201ENST00000420969 6821 ntBASIC3.82□□□□□ -1.8
RTCBQ9Y3I0 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.82□□□□□ -1.8
RTCBQ9Y3I0 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.82□□□□□ -1.8
RTCBQ9Y3I0 RNA5SP432-201ENST00000362480 116 ntBASIC3.82□□□□□ -1.8
RTCBQ9Y3I0 Y_RNA.124-201ENST00000363339 93 ntBASIC3.82□□□□□ -1.8
RTCBQ9Y3I0 RNY3P5-201ENST00000384127 102 ntBASIC3.82□□□□□ -1.8
RTCBQ9Y3I0 RNU6-768P-201ENST00000384683 107 ntBASIC3.82□□□□□ -1.8
RTCBQ9Y3I0 SNORA36B-201ENST00000410438 131 ntBASIC3.82□□□□□ -1.8
RTCBQ9Y3I0 AC097463.2-201ENST00000421074 142 ntBASIC3.82□□□□□ -1.8
RTCBQ9Y3I0 AC063976.3-201ENST00000426849 329 ntBASIC3.82□□□□□ -1.8
RTCBQ9Y3I0 RPL23AP7-203ENST00000449021 469 ntBASIC3.82□□□□□ -1.8
RTCBQ9Y3I0 HSPE1P13-201ENST00000451143 297 ntBASIC3.82□□□□□ -1.8
RTCBQ9Y3I0 AP001340.1-201ENST00000624405 217 ntBASIC3.82□□□□□ -1.8
RTCBQ9Y3I0 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.82□□□□□ -1.8
RTCBQ9Y3I0 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RTCBQ9Y3I0 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
RTCBQ9Y3I0 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.82□□□□□ -1.8
RTCBQ9Y3I0 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.82□□□□□ -1.8
RTCBQ9Y3I0 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.82□□□□□ -1.8
RTCBQ9Y3I0 ZNF702P-202ENST00000434269 1966 ntBASIC3.82□□□□□ -1.8
RTCBQ9Y3I0 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
RTCBQ9Y3I0 AL353746.1-201ENST00000566293 6881 ntBASIC3.81□□□□□ -1.8
RTCBQ9Y3I0 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
RTCBQ9Y3I0 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RTCBQ9Y3I0 RNU6-1325P-201ENST00000364905 105 ntBASIC3.81□□□□□ -1.8
RTCBQ9Y3I0 Y_RNA.393-201ENST00000383936 102 ntBASIC3.81□□□□□ -1.8
RTCBQ9Y3I0 MIR518C-201ENST00000384822 101 ntBASIC3.81□□□□□ -1.8
RTCBQ9Y3I0 EIF4EP4-201ENST00000424916 578 ntBASIC3.81□□□□□ -1.8
RTCBQ9Y3I0 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.81□□□□□ -1.8
RTCBQ9Y3I0 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.81□□□□□ -1.8
RTCBQ9Y3I0 MIR3186-201ENST00000577404 85 ntBASIC3.81□□□□□ -1.8
RTCBQ9Y3I0 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
RTCBQ9Y3I0 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
RTCBQ9Y3I0 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
RTCBQ9Y3I0 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RTCBQ9Y3I0 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RTCBQ9Y3I0 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RTCBQ9Y3I0 RNU6-834P-201ENST00000362367 110 ntBASIC3.8□□□□□ -1.8
RTCBQ9Y3I0 MIR29B2-201ENST00000385055 81 ntBASIC3.8□□□□□ -1.8
RTCBQ9Y3I0 RNU6-460P-201ENST00000391158 108 ntBASIC3.8□□□□□ -1.8
RTCBQ9Y3I0 MIR300-201ENST00000401138 83 ntBASIC3.8□□□□□ -1.8
RTCBQ9Y3I0 AL355796.1-201ENST00000406706 323 ntBASIC3.8□□□□□ -1.8
RTCBQ9Y3I0 RNU4-43P-201ENST00000410628 137 ntBASIC3.8□□□□□ -1.8
RTCBQ9Y3I0 AL121890.1-201ENST00000435457 205 ntBASIC3.8□□□□□ -1.8
RTCBQ9Y3I0 RNU6-1337P-201ENST00000516525 95 ntBASIC3.8□□□□□ -1.8
RTCBQ9Y3I0 AP001328.1-201ENST00000528550 176 ntBASIC3.8□□□□□ -1.8
RTCBQ9Y3I0 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.8□□□□□ -1.8
RTCBQ9Y3I0 AP003357.1-201ENST00000604497 148 ntBASIC3.8□□□□□ -1.8
RTCBQ9Y3I0 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.8□□□□□ -1.8
RTCBQ9Y3I0 AC007256.1-201ENST00000392253 2765 ntBASIC3.8□□□□□ -1.8
RTCBQ9Y3I0 AC093010.3-201ENST00000570269 15214 ntBASIC3.8□□□□□ -1.8
RTCBQ9Y3I0 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RTCBQ9Y3I0 AC073325.2-201ENST00000339545 159 ntBASIC3.79□□□□□ -1.8
RTCBQ9Y3I0 RNU6-1180P-201ENST00000364935 107 ntBASIC3.79□□□□□ -1.8
RTCBQ9Y3I0 SNORA20B-201ENST00000384220 132 ntBASIC3.79□□□□□ -1.8
RTCBQ9Y3I0 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC3.79□□□□□ -1.8
RTCBQ9Y3I0 Z98742.2-201ENST00000431564 187 ntBASIC3.79□□□□□ -1.8
RTCBQ9Y3I0 AC087499.2-201ENST00000432861 149 ntBASIC3.79□□□□□ -1.8
RTCBQ9Y3I0 AC107016.2-201ENST00000547968 190 ntBASIC3.79□□□□□ -1.8
RTCBQ9Y3I0 RPL30P11-203ENST00000598995 310 ntBASIC3.79□□□□□ -1.8
RTCBQ9Y3I0 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
RTCBQ9Y3I0 AC091152.2-201ENST00000591628 2569 ntBASIC3.79□□□□□ -1.8
RTCBQ9Y3I0 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.78□□□□□ -1.8
RTCBQ9Y3I0 RNU6-1323P-201ENST00000384025 107 ntBASIC3.78□□□□□ -1.8
RTCBQ9Y3I0 MIR184-201ENST00000384962 84 ntBASIC3.78□□□□□ -1.8
RTCBQ9Y3I0 MIR1283-1-201ENST00000408494 87 ntBASIC3.78□□□□□ -1.8
RTCBQ9Y3I0 MIR1261-201ENST00000408659 82 ntBASIC3.78□□□□□ -1.8
RTCBQ9Y3I0 RNU6-588P-201ENST00000410281 105 ntBASIC3.78□□□□□ -1.8
RTCBQ9Y3I0 RNU7-57P-201ENST00000459540 60 ntBASIC3.78□□□□□ -1.8
RTCBQ9Y3I0 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.78□□□□□ -1.8
RTCBQ9Y3I0 MIR4425-201ENST00000580572 84 ntBASIC3.78□□□□□ -1.8
RTCBQ9Y3I0 XIST_intron.1-201ENST00000619444 68 ntBASIC3.78□□□□□ -1.8
RTCBQ9Y3I0 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
RTCBQ9Y3I0 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
RTCBQ9Y3I0 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.78□□□□□ -1.8
RTCBQ9Y3I0 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
RTCBQ9Y3I0 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.77□□□□□ -1.81
RTCBQ9Y3I0 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
RTCBQ9Y3I0 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
RTCBQ9Y3I0 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.77□□□□□ -1.81
RTCBQ9Y3I0 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
RTCBQ9Y3I0 MIR30E-201ENST00000362104 92 ntBASIC3.77□□□□□ -1.81
RTCBQ9Y3I0 SNORA27.1-201ENST00000362604 124 ntBASIC3.77□□□□□ -1.81
RTCBQ9Y3I0 RNU6-271P-201ENST00000363858 105 ntBASIC3.77□□□□□ -1.81
RTCBQ9Y3I0 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
RTCBQ9Y3I0 SNORA75.5-201ENST00000391291 81 ntBASIC3.77□□□□□ -1.81
RTCBQ9Y3I0 RNU7-14P-201ENST00000459331 62 ntBASIC3.77□□□□□ -1.81
RTCBQ9Y3I0 RPL36AP21-201ENST00000490372 323 ntBASIC3.77□□□□□ -1.81
RTCBQ9Y3I0 SNORA31.1-201ENST00000515993 133 ntBASIC3.77□□□□□ -1.81
RTCBQ9Y3I0 SNORA31.5-201ENST00000516190 133 ntBASIC3.77□□□□□ -1.81
RTCBQ9Y3I0 RNU6-659P-201ENST00000516454 104 ntBASIC3.77□□□□□ -1.81
RTCBQ9Y3I0 RNU2-56P-201ENST00000516826 190 ntBASIC3.77□□□□□ -1.81
RTCBQ9Y3I0 RNU7-116P-201ENST00000516940 62 ntBASIC3.77□□□□□ -1.81
RTCBQ9Y3I0 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.77□□□□□ -1.81
RTCBQ9Y3I0 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.77□□□□□ -1.81
RTCBQ9Y3I0 MIR4753-201ENST00000585119 83 ntBASIC3.77□□□□□ -1.81
RTCBQ9Y3I0 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.77□□□□□ -1.81
RTCBQ9Y3I0 POLR3GP1-201ENST00000594073 261 ntBASIC3.77□□□□□ -1.81
RTCBQ9Y3I0 U7.2-201ENST00000607576 63 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms