Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.38□□□□□ -1.87
AP4E1Q9UPM8 AC010531.2-201ENST00000465012 153 ntBASIC3.38□□□□□ -1.87
AP4E1Q9UPM8 RNA5SP20-201ENST00000515976 84 ntBASIC3.38□□□□□ -1.87
AP4E1Q9UPM8 SCARNA20.6-201ENST00000517251 106 ntBASIC3.38□□□□□ -1.87
AP4E1Q9UPM8 AC103810.1-201ENST00000579873 453 ntBASIC3.38□□□□□ -1.87
AP4E1Q9UPM8 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.38□□□□□ -1.87
AP4E1Q9UPM8 MIR4444-1-201ENST00000581696 74 ntBASIC3.38□□□□□ -1.87
AP4E1Q9UPM8 MIR4444-2-201ENST00000584390 74 ntBASIC3.38□□□□□ -1.87
AP4E1Q9UPM8 AC019176.2-201ENST00000611579 315 ntBASIC3.38□□□□□ -1.87
AP4E1Q9UPM8 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.38□□□□□ -1.87
AP4E1Q9UPM8 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
AP4E1Q9UPM8 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.38□□□□□ -1.87
AP4E1Q9UPM8 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.37□□□□□ -1.87
AP4E1Q9UPM8 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
AP4E1Q9UPM8 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
AP4E1Q9UPM8 U8.1-201ENST00000362843 134 ntBASIC3.37□□□□□ -1.87
AP4E1Q9UPM8 RNU1-72P-201ENST00000362976 153 ntBASIC3.37□□□□□ -1.87
AP4E1Q9UPM8 RNU4-41P-201ENST00000364426 143 ntBASIC3.37□□□□□ -1.87
AP4E1Q9UPM8 RNU6-234P-201ENST00000365229 104 ntBASIC3.37□□□□□ -1.87
AP4E1Q9UPM8 Y_RNA.432-201ENST00000384087 111 ntBASIC3.37□□□□□ -1.87
AP4E1Q9UPM8 MIR767-201ENST00000390228 109 ntBASIC3.37□□□□□ -1.87
AP4E1Q9UPM8 RNU2-55P-201ENST00000411146 174 ntBASIC3.37□□□□□ -1.87
AP4E1Q9UPM8 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.37□□□□□ -1.87
AP4E1Q9UPM8 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.37□□□□□ -1.87
AP4E1Q9UPM8 AC016717.1-201ENST00000448918 286 ntBASIC3.37□□□□□ -1.87
AP4E1Q9UPM8 AC115115.1-201ENST00000449927 248 ntBASIC3.37□□□□□ -1.87
AP4E1Q9UPM8 RN7SL442P-201ENST00000473804 320 ntBASIC3.37□□□□□ -1.87
AP4E1Q9UPM8 AC109329.2-201ENST00000519658 482 ntBASIC3.37□□□□□ -1.87
AP4E1Q9UPM8 AC104027.1-201ENST00000521887 300 ntBASIC3.37□□□□□ -1.87
AP4E1Q9UPM8 MIR7975-201ENST00000619350 68 ntBASIC3.37□□□□□ -1.87
AP4E1Q9UPM8 AC073476.4-201ENST00000628409 72 ntBASIC3.37□□□□□ -1.87
AP4E1Q9UPM8 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.37□□□□□ -1.87
AP4E1Q9UPM8 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.37□□□□□ -1.87
AP4E1Q9UPM8 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
AP4E1Q9UPM8 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.37□□□□□ -1.87
AP4E1Q9UPM8 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
AP4E1Q9UPM8 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.37□□□□□ -1.87
AP4E1Q9UPM8 AC007256.1-201ENST00000392253 2765 ntBASIC3.36□□□□□ -1.87
AP4E1Q9UPM8 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
AP4E1Q9UPM8 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
AP4E1Q9UPM8 MIR1294-201ENST00000408503 142 ntBASIC3.36□□□□□ -1.87
AP4E1Q9UPM8 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.36□□□□□ -1.87
AP4E1Q9UPM8 AL031183.1-201ENST00000457667 207 ntBASIC3.36□□□□□ -1.87
AP4E1Q9UPM8 AC090515.1-201ENST00000465295 476 ntBASIC3.36□□□□□ -1.87
AP4E1Q9UPM8 AC083906.5-201ENST00000503722 328 ntBASIC3.36□□□□□ -1.87
AP4E1Q9UPM8 PHBP14-201ENST00000512887 367 ntBASIC3.36□□□□□ -1.87
AP4E1Q9UPM8 AC027419.1-201ENST00000522976 328 ntBASIC3.36□□□□□ -1.87
AP4E1Q9UPM8 AC015720.1-201ENST00000565251 277 ntBASIC3.36□□□□□ -1.87
AP4E1Q9UPM8 Y_RNA.757-201ENST00000578934 114 ntBASIC3.36□□□□□ -1.87
AP4E1Q9UPM8 AL049861.1-201ENST00000603130 150 ntBASIC3.36□□□□□ -1.87
AP4E1Q9UPM8 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.36□□□□□ -1.87
AP4E1Q9UPM8 AC012314.7-201ENST00000619693 93 ntBASIC3.36□□□□□ -1.87
AP4E1Q9UPM8 MAPK10-362ENST00000641864 4484 ntBASIC3.36□□□□□ -1.87
AP4E1Q9UPM8 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
AP4E1Q9UPM8 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
AP4E1Q9UPM8 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
AP4E1Q9UPM8 MAPK10-322ENST00000641485 4530 ntBASIC3.36□□□□□ -1.87
AP4E1Q9UPM8 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
AP4E1Q9UPM8 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
AP4E1Q9UPM8 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.35□□□□□ -1.87
AP4E1Q9UPM8 MIR7-3-201ENST00000384898 110 ntBASIC3.35□□□□□ -1.87
AP4E1Q9UPM8 RNA5SP511-201ENST00000410487 115 ntBASIC3.35□□□□□ -1.87
AP4E1Q9UPM8 AC016909.1-201ENST00000415916 166 ntBASIC3.35□□□□□ -1.87
AP4E1Q9UPM8 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC3.35□□□□□ -1.87
AP4E1Q9UPM8 AC025647.1-201ENST00000517879 253 ntBASIC3.35□□□□□ -1.87
AP4E1Q9UPM8 MTND5P34-201ENST00000568888 325 ntBASIC3.35□□□□□ -1.87
AP4E1Q9UPM8 AC097639.2-201ENST00000603159 172 ntBASIC3.35□□□□□ -1.87
AP4E1Q9UPM8 AC006435.5-201ENST00000624486 112 ntBASIC3.35□□□□□ -1.87
AP4E1Q9UPM8 SNORA50A-202ENST00000629536 136 ntBASIC3.35□□□□□ -1.87
AP4E1Q9UPM8 U6.95-201ENST00000636931 70 ntBASIC3.35□□□□□ -1.87
AP4E1Q9UPM8 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.35□□□□□ -1.87
AP4E1Q9UPM8 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
AP4E1Q9UPM8 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC3.34□□□□□ -1.87
AP4E1Q9UPM8 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
AP4E1Q9UPM8 Y_RNA.120-201ENST00000363304 110 ntBASIC3.34□□□□□ -1.87
AP4E1Q9UPM8 SNORD31B-201ENST00000364977 69 ntBASIC3.34□□□□□ -1.87
AP4E1Q9UPM8 AL353705.1-201ENST00000433468 480 ntBASIC3.34□□□□□ -1.87
AP4E1Q9UPM8 AC016925.1-201ENST00000458303 298 ntBASIC3.34□□□□□ -1.87
AP4E1Q9UPM8 RNA5SP112-201ENST00000515937 99 ntBASIC3.34□□□□□ -1.87
AP4E1Q9UPM8 SNORD33.1-201ENST00000516213 88 ntBASIC3.34□□□□□ -1.87
AP4E1Q9UPM8 RNU1-143P-201ENST00000516296 146 ntBASIC3.34□□□□□ -1.87
AP4E1Q9UPM8 SNORA64.4-201ENST00000516632 81 ntBASIC3.34□□□□□ -1.87
AP4E1Q9UPM8 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.34□□□□□ -1.87
AP4E1Q9UPM8 MIR3613-201ENST00000579844 87 ntBASIC3.34□□□□□ -1.87
AP4E1Q9UPM8 MIR2682-201ENST00000580305 110 ntBASIC3.34□□□□□ -1.87
AP4E1Q9UPM8 MIR4765-201ENST00000585007 77 ntBASIC3.34□□□□□ -1.87
AP4E1Q9UPM8 U1.23-201ENST00000610293 146 ntBASIC3.34□□□□□ -1.87
AP4E1Q9UPM8 AC096577.2-201ENST00000611455 153 ntBASIC3.34□□□□□ -1.87
AP4E1Q9UPM8 RNU1-68P-201ENST00000615382 146 ntBASIC3.34□□□□□ -1.87
AP4E1Q9UPM8 MIR6075-201ENST00000620782 95 ntBASIC3.34□□□□□ -1.87
AP4E1Q9UPM8 U1.39-201ENST00000621562 146 ntBASIC3.34□□□□□ -1.87
AP4E1Q9UPM8 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.34□□□□□ -1.87
AP4E1Q9UPM8 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.34□□□□□ -1.88
AP4E1Q9UPM8 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.34□□□□□ -1.88
AP4E1Q9UPM8 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.88
AP4E1Q9UPM8 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
AP4E1Q9UPM8 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.33□□□□□ -1.88
AP4E1Q9UPM8 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
AP4E1Q9UPM8 AC009487.4-201ENST00000624969 3585 ntBASIC3.33□□□□□ -1.88
AP4E1Q9UPM8 Y_RNA.43-201ENST00000362670 111 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 150.7 ms