Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 SNORA27-201ENST00000384323 126 ntBASIC4.25□□□□□ -1.73
LHX6Q9UPM6 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
LHX6Q9UPM6 AC060773.1-201ENST00000421698 310 ntBASIC4.25□□□□□ -1.73
LHX6Q9UPM6 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
LHX6Q9UPM6 RNU7-96P-201ENST00000459535 64 ntBASIC4.25□□□□□ -1.73
LHX6Q9UPM6 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.25□□□□□ -1.73
LHX6Q9UPM6 RNU6-998P-201ENST00000515894 101 ntBASIC4.25□□□□□ -1.73
LHX6Q9UPM6 RNU1-61P-201ENST00000516107 151 ntBASIC4.25□□□□□ -1.73
LHX6Q9UPM6 RNA5SP360-201ENST00000516555 118 ntBASIC4.25□□□□□ -1.73
LHX6Q9UPM6 AP000867.2-201ENST00000532468 320 ntBASIC4.25□□□□□ -1.73
LHX6Q9UPM6 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.25□□□□□ -1.73
LHX6Q9UPM6 MIR1248-201ENST00000629190 106 ntBASIC4.25□□□□□ -1.73
LHX6Q9UPM6 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.25□□□□□ -1.73
LHX6Q9UPM6 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
LHX6Q9UPM6 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
LHX6Q9UPM6 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
LHX6Q9UPM6 AL161912.2-201ENST00000565707 3007 ntBASIC4.24□□□□□ -1.73
LHX6Q9UPM6 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.24□□□□□ -1.73
LHX6Q9UPM6 snoU2-30.2-201ENST00000362805 70 ntBASIC4.24□□□□□ -1.73
LHX6Q9UPM6 MIR659-201ENST00000384963 97 ntBASIC4.24□□□□□ -1.73
LHX6Q9UPM6 MIR218-2-201ENST00000385006 110 ntBASIC4.24□□□□□ -1.73
LHX6Q9UPM6 AC244505.4-201ENST00000434905 287 ntBASIC4.24□□□□□ -1.73
LHX6Q9UPM6 RPS12P2-201ENST00000439728 269 ntBASIC4.24□□□□□ -1.73
LHX6Q9UPM6 AC069257.2-201ENST00000441819 155 ntBASIC4.24□□□□□ -1.73
LHX6Q9UPM6 SSXP5-201ENST00000443473 287 ntBASIC4.24□□□□□ -1.73
LHX6Q9UPM6 AP000873.1-201ENST00000463987 400 ntBASIC4.24□□□□□ -1.73
LHX6Q9UPM6 RNU6-586P-201ENST00000517265 104 ntBASIC4.24□□□□□ -1.73
LHX6Q9UPM6 AC140658.3-201ENST00000567603 271 ntBASIC4.24□□□□□ -1.73
LHX6Q9UPM6 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.24□□□□□ -1.73
LHX6Q9UPM6 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.24□□□□□ -1.73
LHX6Q9UPM6 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
LHX6Q9UPM6 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.24□□□□□ -1.73
LHX6Q9UPM6 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.24□□□□□ -1.73
LHX6Q9UPM6 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.24□□□□□ -1.73
LHX6Q9UPM6 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
LHX6Q9UPM6 Y_RNA.171-201ENST00000363760 102 ntBASIC4.23□□□□□ -1.73
LHX6Q9UPM6 RNU6-1163P-201ENST00000364516 107 ntBASIC4.23□□□□□ -1.73
LHX6Q9UPM6 Z98742.3-201ENST00000418637 326 ntBASIC4.23□□□□□ -1.73
LHX6Q9UPM6 RNA5SP112-201ENST00000515937 99 ntBASIC4.23□□□□□ -1.73
LHX6Q9UPM6 RNA5SP249-201ENST00000516127 99 ntBASIC4.23□□□□□ -1.73
LHX6Q9UPM6 SNORD45.4-201ENST00000516629 73 ntBASIC4.23□□□□□ -1.73
LHX6Q9UPM6 MIR5685-201ENST00000579080 79 ntBASIC4.23□□□□□ -1.73
LHX6Q9UPM6 MIR4765-201ENST00000585007 77 ntBASIC4.23□□□□□ -1.73
LHX6Q9UPM6 AC092881.1-201ENST00000638218 2733 ntBASIC4.23□□□□□ -1.73
LHX6Q9UPM6 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
LHX6Q9UPM6 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
LHX6Q9UPM6 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
LHX6Q9UPM6 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
LHX6Q9UPM6 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC4.23□□□□□ -1.73
LHX6Q9UPM6 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
LHX6Q9UPM6 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.22□□□□□ -1.73
LHX6Q9UPM6 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
LHX6Q9UPM6 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
LHX6Q9UPM6 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
LHX6Q9UPM6 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.22□□□□□ -1.73
LHX6Q9UPM6 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.22□□□□□ -1.73
LHX6Q9UPM6 MAPK10-286ENST00000641208 8747 ntBASIC4.22□□□□□ -1.73
LHX6Q9UPM6 SNORD115-37-201ENST00000363768 82 ntBASIC4.22□□□□□ -1.73
LHX6Q9UPM6 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC4.22□□□□□ -1.73
LHX6Q9UPM6 RNU6ATAC13P-201ENST00000516152 131 ntBASIC4.22□□□□□ -1.73
LHX6Q9UPM6 ZNF861P-201ENST00000588126 639 ntBASIC4.22□□□□□ -1.73
LHX6Q9UPM6 AL353149.1-201ENST00000610667 244 ntBASIC4.22□□□□□ -1.73
LHX6Q9UPM6 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.22□□□□□ -1.73
LHX6Q9UPM6 AL133243.3-201ENST00000617415 3004 ntBASIC4.22□□□□□ -1.73
LHX6Q9UPM6 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.22□□□□□ -1.73
LHX6Q9UPM6 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
LHX6Q9UPM6 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
LHX6Q9UPM6 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC4.22□□□□□ -1.73
LHX6Q9UPM6 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.22□□□□□ -1.73
LHX6Q9UPM6 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC4.21□□□□□ -1.73
LHX6Q9UPM6 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
LHX6Q9UPM6 Y_RNA.140-201ENST00000363474 103 ntBASIC4.21□□□□□ -1.74
LHX6Q9UPM6 AC123900.1-201ENST00000420390 96 ntBASIC4.21□□□□□ -1.74
LHX6Q9UPM6 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC4.21□□□□□ -1.74
LHX6Q9UPM6 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC4.21□□□□□ -1.74
LHX6Q9UPM6 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.21□□□□□ -1.74
LHX6Q9UPM6 AL109933.2-201ENST00000452651 260 ntBASIC4.21□□□□□ -1.74
LHX6Q9UPM6 MIR1270-201ENST00000459320 83 ntBASIC4.21□□□□□ -1.74
LHX6Q9UPM6 RNU6-965P-201ENST00000516721 96 ntBASIC4.21□□□□□ -1.74
LHX6Q9UPM6 TVP23BP1-201ENST00000557500 617 ntBASIC4.21□□□□□ -1.74
LHX6Q9UPM6 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
LHX6Q9UPM6 MIR548AE2-201ENST00000583456 67 ntBASIC4.21□□□□□ -1.74
LHX6Q9UPM6 LINC00901.1-201ENST00000617252 152 ntBASIC4.21□□□□□ -1.74
LHX6Q9UPM6 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
LHX6Q9UPM6 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.21□□□□□ -1.74
LHX6Q9UPM6 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
LHX6Q9UPM6 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
LHX6Q9UPM6 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.21□□□□□ -1.74
LHX6Q9UPM6 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
LHX6Q9UPM6 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC4.2□□□□□ -1.74
LHX6Q9UPM6 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.2□□□□□ -1.74
LHX6Q9UPM6 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.2□□□□□ -1.74
LHX6Q9UPM6 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
LHX6Q9UPM6 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.2□□□□□ -1.74
LHX6Q9UPM6 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LHX6Q9UPM6 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
LHX6Q9UPM6 Y_RNA.247-201ENST00000364500 92 ntBASIC4.2□□□□□ -1.74
LHX6Q9UPM6 SNORA73.2-201ENST00000364946 201 ntBASIC4.2□□□□□ -1.74
LHX6Q9UPM6 SNORA80E-201ENST00000384744 137 ntBASIC4.2□□□□□ -1.74
LHX6Q9UPM6 SNORD96B-201ENST00000386148 79 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms