Protein–RNA interactions for Protein: Q9NZI6

TFCP2L1, Transcription factor CP2-like protein 1, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFCP2L1Q9NZI6 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.62□□□□□ -1.99
TFCP2L1Q9NZI6 AL356575.1-201ENST00000603008 283 ntBASIC2.62□□□□□ -1.99
TFCP2L1Q9NZI6 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
TFCP2L1Q9NZI6 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.61□□□□□ -1.99
TFCP2L1Q9NZI6 Y_RNA.101-201ENST00000363154 102 ntBASIC2.61□□□□□ -1.99
TFCP2L1Q9NZI6 RNU6-944P-201ENST00000364023 107 ntBASIC2.61□□□□□ -1.99
TFCP2L1Q9NZI6 DEFA7P-201ENST00000382676 285 ntBASIC2.61□□□□□ -1.99
TFCP2L1Q9NZI6 RNU6-793P-201ENST00000384233 104 ntBASIC2.61□□□□□ -1.99
TFCP2L1Q9NZI6 SNORD63-201ENST00000384262 68 ntBASIC2.61□□□□□ -1.99
TFCP2L1Q9NZI6 Y_RNA.466-201ENST00000384294 113 ntBASIC2.61□□□□□ -1.99
TFCP2L1Q9NZI6 Y_RNA.539-201ENST00000384635 107 ntBASIC2.61□□□□□ -1.99
TFCP2L1Q9NZI6 MT-TR-201ENST00000387439 65 ntBASIC2.61□□□□□ -1.99
TFCP2L1Q9NZI6 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
TFCP2L1Q9NZI6 AL033519.2-201ENST00000403958 392 ntBASIC2.61□□□□□ -1.99
TFCP2L1Q9NZI6 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.61□□□□□ -1.99
TFCP2L1Q9NZI6 RPL39P38-201ENST00000467018 153 ntBASIC2.61□□□□□ -1.99
TFCP2L1Q9NZI6 AC005840.1-201ENST00000498412 377 ntBASIC2.61□□□□□ -1.99
TFCP2L1Q9NZI6 HMGB3P17-201ENST00000504195 649 ntBASIC2.61□□□□□ -1.99
TFCP2L1Q9NZI6 RNA5SP385-201ENST00000515947 110 ntBASIC2.61□□□□□ -1.99
TFCP2L1Q9NZI6 RNU2-44P-201ENST00000516795 194 ntBASIC2.61□□□□□ -1.99
TFCP2L1Q9NZI6 RNU6-794P-201ENST00000517261 64 ntBASIC2.61□□□□□ -1.99
TFCP2L1Q9NZI6 SCARNA11.3-201ENST00000517276 130 ntBASIC2.61□□□□□ -1.99
TFCP2L1Q9NZI6 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.61□□□□□ -1.99
TFCP2L1Q9NZI6 AC018448.1-201ENST00000552843 316 ntBASIC2.61□□□□□ -1.99
TFCP2L1Q9NZI6 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.61□□□□□ -1.99
TFCP2L1Q9NZI6 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.61□□□□□ -1.99
TFCP2L1Q9NZI6 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.6□□□□□ -1.99
TFCP2L1Q9NZI6 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.6□□□□□ -1.99
TFCP2L1Q9NZI6 AL391987.6-201ENST00000305671 199 ntBASIC2.6□□□□□ -1.99
TFCP2L1Q9NZI6 SNORD81.1-201ENST00000363064 77 ntBASIC2.6□□□□□ -1.99
TFCP2L1Q9NZI6 SNORA25.9-201ENST00000365087 128 ntBASIC2.6□□□□□ -1.99
TFCP2L1Q9NZI6 Y_RNA.446-201ENST00000384178 104 ntBASIC2.6□□□□□ -1.99
TFCP2L1Q9NZI6 Y_RNA.570-201ENST00000384750 101 ntBASIC2.6□□□□□ -1.99
TFCP2L1Q9NZI6 MIR489-201ENST00000384923 84 ntBASIC2.6□□□□□ -1.99
TFCP2L1Q9NZI6 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
TFCP2L1Q9NZI6 Y_RNA.597-201ENST00000410463 100 ntBASIC2.6□□□□□ -1.99
TFCP2L1Q9NZI6 RNA5SP270-201ENST00000411361 118 ntBASIC2.6□□□□□ -1.99
TFCP2L1Q9NZI6 RPL19P1-201ENST00000411635 428 ntBASIC2.6□□□□□ -1.99
TFCP2L1Q9NZI6 AL139156.1-201ENST00000412785 841 ntBASIC2.6□□□□□ -1.99
TFCP2L1Q9NZI6 AC096920.1-201ENST00000423991 241 ntBASIC2.6□□□□□ -1.99
TFCP2L1Q9NZI6 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.6□□□□□ -1.99
TFCP2L1Q9NZI6 AC007395.1-201ENST00000451333 677 ntBASIC2.6□□□□□ -1.99
TFCP2L1Q9NZI6 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.6□□□□□ -1.99
TFCP2L1Q9NZI6 TRMT112P2-201ENST00000512910 132 ntBASIC2.6□□□□□ -1.99
TFCP2L1Q9NZI6 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.6□□□□□ -1.99
TFCP2L1Q9NZI6 RNU6-111P-201ENST00000517179 105 ntBASIC2.6□□□□□ -1.99
TFCP2L1Q9NZI6 AC233702.2-202ENST00000562547 291 ntBASIC2.6□□□□□ -1.99
TFCP2L1Q9NZI6 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.6□□□□□ -1.99
TFCP2L1Q9NZI6 MIR4643-201ENST00000577473 78 ntBASIC2.6□□□□□ -1.99
TFCP2L1Q9NZI6 AL713866.2-201ENST00000603579 219 ntBASIC2.6□□□□□ -1.99
TFCP2L1Q9NZI6 AL356280.1-201ENST00000603614 379 ntBASIC2.6□□□□□ -1.99
TFCP2L1Q9NZI6 AC090517.3-201ENST00000625170 141 ntBASIC2.6□□□□□ -1.99
TFCP2L1Q9NZI6 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.6□□□□□ -1.99
TFCP2L1Q9NZI6 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.6□□□□□ -1.99
TFCP2L1Q9NZI6 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
TFCP2L1Q9NZI6 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.59□□□□□ -1.99
TFCP2L1Q9NZI6 RNY1P10-201ENST00000363268 113 ntBASIC2.59□□□□□ -1.99
TFCP2L1Q9NZI6 SNORD27-201ENST00000363981 72 ntBASIC2.59□□□□□ -1.99
TFCP2L1Q9NZI6 SNORD56.5-201ENST00000364281 72 ntBASIC2.59□□□□□ -1.99
TFCP2L1Q9NZI6 SNORD32B-201ENST00000364460 84 ntBASIC2.59□□□□□ -1.99
TFCP2L1Q9NZI6 RNU6-1175P-201ENST00000365200 107 ntBASIC2.59□□□□□ -1.99
TFCP2L1Q9NZI6 RNA5SP190-201ENST00000365222 118 ntBASIC2.59□□□□□ -1.99
TFCP2L1Q9NZI6 RNU6-245P-201ENST00000384020 107 ntBASIC2.59□□□□□ -1.99
TFCP2L1Q9NZI6 RNU6-1083P-201ENST00000384022 107 ntBASIC2.59□□□□□ -1.99
TFCP2L1Q9NZI6 Y_RNA.462-201ENST00000384268 102 ntBASIC2.59□□□□□ -1.99
TFCP2L1Q9NZI6 RNU6-1274P-201ENST00000384557 107 ntBASIC2.59□□□□□ -1.99
TFCP2L1Q9NZI6 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.59□□□□□ -1.99
TFCP2L1Q9NZI6 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.59□□□□□ -1.99
TFCP2L1Q9NZI6 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.59□□□□□ -1.99
TFCP2L1Q9NZI6 UQCRBP2-201ENST00000447827 297 ntBASIC2.59□□□□□ -1.99
TFCP2L1Q9NZI6 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.59□□□□□ -1.99
TFCP2L1Q9NZI6 RNA5SP112-201ENST00000515937 99 ntBASIC2.59□□□□□ -1.99
TFCP2L1Q9NZI6 RNU7-110P-201ENST00000516891 62 ntBASIC2.59□□□□□ -1.99
TFCP2L1Q9NZI6 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.59□□□□□ -1.99
TFCP2L1Q9NZI6 MIR5006-201ENST00000583027 110 ntBASIC2.59□□□□□ -1.99
TFCP2L1Q9NZI6 AL359821.1-201ENST00000605519 182 ntBASIC2.59□□□□□ -1.99
TFCP2L1Q9NZI6 AC005562.2-201ENST00000618264 111 ntBASIC2.59□□□□□ -1.99
TFCP2L1Q9NZI6 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
TFCP2L1Q9NZI6 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.59□□□□□ -2
TFCP2L1Q9NZI6 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.59□□□□□ -2
TFCP2L1Q9NZI6 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.58□□□□□ -2
TFCP2L1Q9NZI6 RNU1-62P-201ENST00000362599 164 ntBASIC2.58□□□□□ -2
TFCP2L1Q9NZI6 Y_RNA.277-201ENST00000364754 102 ntBASIC2.58□□□□□ -2
TFCP2L1Q9NZI6 SNORA67.2-201ENST00000384300 149 ntBASIC2.58□□□□□ -2
TFCP2L1Q9NZI6 AL603910.2-201ENST00000407268 136 ntBASIC2.58□□□□□ -2
TFCP2L1Q9NZI6 RNU2-14P-201ENST00000411053 191 ntBASIC2.58□□□□□ -2
TFCP2L1Q9NZI6 RNU6-1199P-201ENST00000411249 104 ntBASIC2.58□□□□□ -2
TFCP2L1Q9NZI6 AC139712.2-201ENST00000424302 339 ntBASIC2.58□□□□□ -2
TFCP2L1Q9NZI6 RAB28P5-201ENST00000427490 651 ntBASIC2.58□□□□□ -2
TFCP2L1Q9NZI6 RNU6-625P-201ENST00000459412 107 ntBASIC2.58□□□□□ -2
TFCP2L1Q9NZI6 RNU1-117P-201ENST00000517041 158 ntBASIC2.58□□□□□ -2
TFCP2L1Q9NZI6 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.58□□□□□ -2
TFCP2L1Q9NZI6 MIR3199-1-201ENST00000582434 88 ntBASIC2.58□□□□□ -2
TFCP2L1Q9NZI6 SNRPGP20-201ENST00000604477 205 ntBASIC2.58□□□□□ -2
TFCP2L1Q9NZI6 AC011373.1-201ENST00000607270 237 ntBASIC2.58□□□□□ -2
TFCP2L1Q9NZI6 AC004467.1-201ENST00000615678 330 ntBASIC2.58□□□□□ -2
TFCP2L1Q9NZI6 AC091932.3-201ENST00000624223 323 ntBASIC2.58□□□□□ -2
TFCP2L1Q9NZI6 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.58□□□□□ -2
TFCP2L1Q9NZI6 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.57□□□□□ -2
TFCP2L1Q9NZI6 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms