Protein–RNA interactions for Protein: Q9NQ35

NRIP3, Nuclear receptor-interacting protein 3, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NRIP3Q9NQ35 AC134026.1-201ENST00000623249 2239 ntBASIC2.48□□□□□ -2.01
NRIP3Q9NQ35 AC009487.2-201ENST00000420969 6821 ntBASIC2.48□□□□□ -2.01
NRIP3Q9NQ35 SNORD114-19-201ENST00000363072 75 ntBASIC2.48□□□□□ -2.01
NRIP3Q9NQ35 Y_RNA.172-201ENST00000363765 102 ntBASIC2.48□□□□□ -2.01
NRIP3Q9NQ35 Y_RNA.262-201ENST00000364641 102 ntBASIC2.48□□□□□ -2.01
NRIP3Q9NQ35 RNA5SP125-201ENST00000364843 120 ntBASIC2.48□□□□□ -2.01
NRIP3Q9NQ35 RNY1P5-201ENST00000383890 115 ntBASIC2.48□□□□□ -2.01
NRIP3Q9NQ35 Y_RNA.412-201ENST00000384001 104 ntBASIC2.48□□□□□ -2.01
NRIP3Q9NQ35 Y_RNA.571-201ENST00000384753 98 ntBASIC2.48□□□□□ -2.01
NRIP3Q9NQ35 RNA5SP171-201ENST00000391071 115 ntBASIC2.48□□□□□ -2.01
NRIP3Q9NQ35 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.48□□□□□ -2.01
NRIP3Q9NQ35 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.48□□□□□ -2.01
NRIP3Q9NQ35 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.48□□□□□ -2.01
NRIP3Q9NQ35 AC100767.1-201ENST00000528178 123 ntBASIC2.48□□□□□ -2.01
NRIP3Q9NQ35 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.48□□□□□ -2.01
NRIP3Q9NQ35 MIR5006-201ENST00000583027 110 ntBASIC2.48□□□□□ -2.01
NRIP3Q9NQ35 SNRPGP20-201ENST00000604477 205 ntBASIC2.48□□□□□ -2.01
NRIP3Q9NQ35 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.48□□□□□ -2.01
NRIP3Q9NQ35 MIR203B-201ENST00000636080 86 ntBASIC2.48□□□□□ -2.01
NRIP3Q9NQ35 AC132825.6-201ENST00000638861 357 ntBASIC2.48□□□□□ -2.01
NRIP3Q9NQ35 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
NRIP3Q9NQ35 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
NRIP3Q9NQ35 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
NRIP3Q9NQ35 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.48□□□□□ -2.01
NRIP3Q9NQ35 RNU6-1210P-201ENST00000363775 107 ntBASIC2.47□□□□□ -2.01
NRIP3Q9NQ35 RNU6-324P-201ENST00000363957 106 ntBASIC2.47□□□□□ -2.01
NRIP3Q9NQ35 snoU2_19.4-201ENST00000364329 80 ntBASIC2.47□□□□□ -2.01
NRIP3Q9NQ35 RNU6-1264P-201ENST00000383891 107 ntBASIC2.47□□□□□ -2.01
NRIP3Q9NQ35 Y_RNA.441-201ENST00000384123 112 ntBASIC2.47□□□□□ -2.01
NRIP3Q9NQ35 MIR548B-201ENST00000385247 97 ntBASIC2.47□□□□□ -2.01
NRIP3Q9NQ35 AL031003.1-201ENST00000404229 172 ntBASIC2.47□□□□□ -2.01
NRIP3Q9NQ35 MIR548I2-201ENST00000408348 149 ntBASIC2.47□□□□□ -2.01
NRIP3Q9NQ35 AL139132.1-201ENST00000431587 344 ntBASIC2.47□□□□□ -2.01
NRIP3Q9NQ35 RPS3P1-201ENST00000456781 192 ntBASIC2.47□□□□□ -2.01
NRIP3Q9NQ35 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.47□□□□□ -2.01
NRIP3Q9NQ35 RNU2-44P-201ENST00000516795 194 ntBASIC2.47□□□□□ -2.01
NRIP3Q9NQ35 RN7SKP57-201ENST00000517248 293 ntBASIC2.47□□□□□ -2.01
NRIP3Q9NQ35 CYCSP23-201ENST00000519781 313 ntBASIC2.47□□□□□ -2.01
NRIP3Q9NQ35 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.47□□□□□ -2.01
NRIP3Q9NQ35 MIR5692C2-201ENST00000577959 77 ntBASIC2.47□□□□□ -2.01
NRIP3Q9NQ35 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.47□□□□□ -2.01
NRIP3Q9NQ35 MIR6798-201ENST00000612887 67 ntBASIC2.47□□□□□ -2.01
NRIP3Q9NQ35 AC068205.3-201ENST00000636385 468 ntBASIC2.47□□□□□ -2.01
NRIP3Q9NQ35 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
NRIP3Q9NQ35 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.47□□□□□ -2.01
NRIP3Q9NQ35 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
NRIP3Q9NQ35 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
NRIP3Q9NQ35 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.46□□□□□ -2.01
NRIP3Q9NQ35 RNU6-655P-201ENST00000362858 107 ntBASIC2.46□□□□□ -2.02
NRIP3Q9NQ35 RNU1-72P-201ENST00000362976 153 ntBASIC2.46□□□□□ -2.02
NRIP3Q9NQ35 U3.9-201ENST00000363823 204 ntBASIC2.46□□□□□ -2.02
NRIP3Q9NQ35 RNU6-704P-201ENST00000364162 103 ntBASIC2.46□□□□□ -2.02
NRIP3Q9NQ35 RNU1-57P-201ENST00000384491 166 ntBASIC2.46□□□□□ -2.02
NRIP3Q9NQ35 AL139095.1-201ENST00000404326 391 ntBASIC2.46□□□□□ -2.02
NRIP3Q9NQ35 RNA5SP475-201ENST00000410568 110 ntBASIC2.46□□□□□ -2.02
NRIP3Q9NQ35 EEF1A1P41-201ENST00000414667 207 ntBASIC2.46□□□□□ -2.02
NRIP3Q9NQ35 AC011753.1-201ENST00000451001 220 ntBASIC2.46□□□□□ -2.02
NRIP3Q9NQ35 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.46□□□□□ -2.02
NRIP3Q9NQ35 MIR449C-201ENST00000516047 92 ntBASIC2.46□□□□□ -2.02
NRIP3Q9NQ35 RNA5SP272-201ENST00000516095 111 ntBASIC2.46□□□□□ -2.02
NRIP3Q9NQ35 RNA5SP341-201ENST00000516261 117 ntBASIC2.46□□□□□ -2.02
NRIP3Q9NQ35 RNU6-344P-201ENST00000516635 111 ntBASIC2.46□□□□□ -2.02
NRIP3Q9NQ35 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.46□□□□□ -2.02
NRIP3Q9NQ35 SNORD11B-201ENST00000607707 90 ntBASIC2.46□□□□□ -2.02
NRIP3Q9NQ35 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.46□□□□□ -2.02
NRIP3Q9NQ35 AC004832.4-201ENST00000608952 331 ntBASIC2.46□□□□□ -2.02
NRIP3Q9NQ35 TCL6_2.1-201ENST00000615162 119 ntBASIC2.46□□□□□ -2.02
NRIP3Q9NQ35 ZNF271P-202ENST00000465539 1970 ntBASIC2.46□□□□□ -2.02
NRIP3Q9NQ35 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.46□□□□□ -2.02
NRIP3Q9NQ35 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.46□□□□□ -2.02
NRIP3Q9NQ35 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
NRIP3Q9NQ35 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
NRIP3Q9NQ35 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
NRIP3Q9NQ35 SNORD116-18-201ENST00000383961 92 ntBASIC2.45□□□□□ -2.02
NRIP3Q9NQ35 RNU1-138P-201ENST00000384093 164 ntBASIC2.45□□□□□ -2.02
NRIP3Q9NQ35 RN7SKP27-201ENST00000410684 333 ntBASIC2.45□□□□□ -2.02
NRIP3Q9NQ35 SEPT7P4-201ENST00000437076 306 ntBASIC2.45□□□□□ -2.02
NRIP3Q9NQ35 TMSB4XP3-201ENST00000445144 114 ntBASIC2.45□□□□□ -2.02
NRIP3Q9NQ35 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
NRIP3Q9NQ35 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.45□□□□□ -2.02
NRIP3Q9NQ35 SNORA74D-201ENST00000516404 141 ntBASIC2.45□□□□□ -2.02
NRIP3Q9NQ35 HSPE1P18-201ENST00000517602 280 ntBASIC2.45□□□□□ -2.02
NRIP3Q9NQ35 AC004486.1-201ENST00000546846 233 ntBASIC2.45□□□□□ -2.02
NRIP3Q9NQ35 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.45□□□□□ -2.02
NRIP3Q9NQ35 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.45□□□□□ -2.02
NRIP3Q9NQ35 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
NRIP3Q9NQ35 U6.115-201ENST00000636045 103 ntBASIC2.45□□□□□ -2.02
NRIP3Q9NQ35 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.45□□□□□ -2.02
NRIP3Q9NQ35 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
NRIP3Q9NQ35 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.44□□□□□ -2.02
NRIP3Q9NQ35 AC069528.2-201ENST00000624849 1991 ntBASIC2.44□□□□□ -2.02
NRIP3Q9NQ35 Y_RNA.124-201ENST00000363339 93 ntBASIC2.44□□□□□ -2.02
NRIP3Q9NQ35 RNU5F-3P-201ENST00000363767 117 ntBASIC2.44□□□□□ -2.02
NRIP3Q9NQ35 Y_RNA.238-201ENST00000364441 102 ntBASIC2.44□□□□□ -2.02
NRIP3Q9NQ35 Y_RNA.243-201ENST00000364481 109 ntBASIC2.44□□□□□ -2.02
NRIP3Q9NQ35 Y_RNA.272-201ENST00000364696 102 ntBASIC2.44□□□□□ -2.02
NRIP3Q9NQ35 Y_RNA.361-201ENST00000365515 120 ntBASIC2.44□□□□□ -2.02
NRIP3Q9NQ35 RNU6-131P-201ENST00000391144 107 ntBASIC2.44□□□□□ -2.02
NRIP3Q9NQ35 RNU6-381P-201ENST00000391259 108 ntBASIC2.44□□□□□ -2.02
NRIP3Q9NQ35 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms