Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AL391987.6-201ENST00000305671 199 ntBASIC2.79□□□□□ -1.96
VTA1Q9NP79 Y_RNA.136-201ENST00000363444 102 ntBASIC2.79□□□□□ -1.96
VTA1Q9NP79 RNA5SP456-201ENST00000364002 114 ntBASIC2.79□□□□□ -1.96
VTA1Q9NP79 MT-TW-201ENST00000387382 68 ntBASIC2.79□□□□□ -1.96
VTA1Q9NP79 MIR548H3-201ENST00000408771 118 ntBASIC2.79□□□□□ -1.96
VTA1Q9NP79 RNA5SP425-201ENST00000410336 112 ntBASIC2.79□□□□□ -1.96
VTA1Q9NP79 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.79□□□□□ -1.96
VTA1Q9NP79 Z98742.3-201ENST00000418637 326 ntBASIC2.79□□□□□ -1.96
VTA1Q9NP79 POLR2KP2-201ENST00000438155 177 ntBASIC2.79□□□□□ -1.96
VTA1Q9NP79 MTCO1P44-201ENST00000441935 243 ntBASIC2.79□□□□□ -1.96
VTA1Q9NP79 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.79□□□□□ -1.96
VTA1Q9NP79 PRELID3BP1-201ENST00000457142 540 ntBASIC2.79□□□□□ -1.96
VTA1Q9NP79 RNU7-26P-201ENST00000458980 63 ntBASIC2.79□□□□□ -1.96
VTA1Q9NP79 RNU6-1132P-201ENST00000459214 107 ntBASIC2.79□□□□□ -1.96
VTA1Q9NP79 SNORA70.12-201ENST00000516084 153 ntBASIC2.79□□□□□ -1.96
VTA1Q9NP79 RNU2-31P-201ENST00000516954 155 ntBASIC2.79□□□□□ -1.96
VTA1Q9NP79 RNU6-570P-201ENST00000517051 105 ntBASIC2.79□□□□□ -1.96
VTA1Q9NP79 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.79□□□□□ -1.96
VTA1Q9NP79 MIR5092-201ENST00000583139 88 ntBASIC2.79□□□□□ -1.96
VTA1Q9NP79 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
VTA1Q9NP79 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
VTA1Q9NP79 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
VTA1Q9NP79 Y_RNA.101-201ENST00000363154 102 ntBASIC2.78□□□□□ -1.96
VTA1Q9NP79 RNU6-574P-201ENST00000384265 107 ntBASIC2.78□□□□□ -1.96
VTA1Q9NP79 Y_RNA.483-201ENST00000384380 101 ntBASIC2.78□□□□□ -1.96
VTA1Q9NP79 Y_RNA.569-201ENST00000384749 103 ntBASIC2.78□□□□□ -1.96
VTA1Q9NP79 SNORA40.19-201ENST00000390846 128 ntBASIC2.78□□□□□ -1.96
VTA1Q9NP79 AC010154.1-201ENST00000425857 269 ntBASIC2.78□□□□□ -1.96
VTA1Q9NP79 RNU1-131P-201ENST00000458943 161 ntBASIC2.78□□□□□ -1.96
VTA1Q9NP79 RNU6-1338P-201ENST00000516328 91 ntBASIC2.78□□□□□ -1.96
VTA1Q9NP79 RNU6-155P-201ENST00000516347 100 ntBASIC2.78□□□□□ -1.96
VTA1Q9NP79 AC023157.2-201ENST00000540596 141 ntBASIC2.78□□□□□ -1.96
VTA1Q9NP79 PRELID2P1-201ENST00000552837 301 ntBASIC2.78□□□□□ -1.96
VTA1Q9NP79 MIR3670-2-201ENST00000582974 65 ntBASIC2.78□□□□□ -1.96
VTA1Q9NP79 MIR3670-1-201ENST00000584160 65 ntBASIC2.78□□□□□ -1.96
VTA1Q9NP79 MIR3670-3-201ENST00000584855 65 ntBASIC2.78□□□□□ -1.96
VTA1Q9NP79 AC005828.6-201ENST00000606610 232 ntBASIC2.78□□□□□ -1.96
VTA1Q9NP79 MIR3670-4-201ENST00000612260 65 ntBASIC2.78□□□□□ -1.96
VTA1Q9NP79 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
VTA1Q9NP79 AC016717.2-201ENST00000609089 5141 ntBASIC2.77□□□□□ -1.97
VTA1Q9NP79 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
VTA1Q9NP79 RNU6-743P-201ENST00000364151 106 ntBASIC2.77□□□□□ -1.97
VTA1Q9NP79 RNU6-454P-201ENST00000364292 107 ntBASIC2.77□□□□□ -1.97
VTA1Q9NP79 Y_RNA.350-201ENST00000365409 98 ntBASIC2.77□□□□□ -1.97
VTA1Q9NP79 Y_RNA.541-201ENST00000384640 113 ntBASIC2.77□□□□□ -1.97
VTA1Q9NP79 Y_RNA.562-201ENST00000384695 113 ntBASIC2.77□□□□□ -1.97
VTA1Q9NP79 MIR215-201ENST00000384858 110 ntBASIC2.77□□□□□ -1.97
VTA1Q9NP79 MIR29C-201ENST00000385231 88 ntBASIC2.77□□□□□ -1.97
VTA1Q9NP79 RNA5SP210-201ENST00000391034 120 ntBASIC2.77□□□□□ -1.97
VTA1Q9NP79 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.77□□□□□ -1.97
VTA1Q9NP79 RNU6-710P-201ENST00000410424 105 ntBASIC2.77□□□□□ -1.97
VTA1Q9NP79 RPL39P38-201ENST00000467018 153 ntBASIC2.77□□□□□ -1.97
VTA1Q9NP79 HMGB3P17-201ENST00000504195 649 ntBASIC2.77□□□□□ -1.97
VTA1Q9NP79 RNU6-991P-201ENST00000516168 107 ntBASIC2.77□□□□□ -1.97
VTA1Q9NP79 AP002001.1-203ENST00000534002 267 ntBASIC2.77□□□□□ -1.97
VTA1Q9NP79 AC055872.1-201ENST00000570978 278 ntBASIC2.77□□□□□ -1.97
VTA1Q9NP79 AC103810.6-201ENST00000606708 136 ntBASIC2.77□□□□□ -1.97
VTA1Q9NP79 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.77□□□□□ -1.97
VTA1Q9NP79 AP001282.2-201ENST00000616149 309 ntBASIC2.77□□□□□ -1.97
VTA1Q9NP79 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
VTA1Q9NP79 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
VTA1Q9NP79 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
VTA1Q9NP79 RNU6-271P-201ENST00000363858 105 ntBASIC2.76□□□□□ -1.97
VTA1Q9NP79 Y_RNA.188-201ENST00000363952 111 ntBASIC2.76□□□□□ -1.97
VTA1Q9NP79 Y_RNA.361-201ENST00000365515 120 ntBASIC2.76□□□□□ -1.97
VTA1Q9NP79 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.76□□□□□ -1.97
VTA1Q9NP79 Y_RNA.383-201ENST00000383855 97 ntBASIC2.76□□□□□ -1.97
VTA1Q9NP79 Y_RNA.489-201ENST00000384410 101 ntBASIC2.76□□□□□ -1.97
VTA1Q9NP79 RNU4-30P-201ENST00000410245 143 ntBASIC2.76□□□□□ -1.97
VTA1Q9NP79 RNU6-1199P-201ENST00000411249 104 ntBASIC2.76□□□□□ -1.97
VTA1Q9NP79 AL356320.1-201ENST00000429616 163 ntBASIC2.76□□□□□ -1.97
VTA1Q9NP79 AC010598.1-201ENST00000510378 103 ntBASIC2.76□□□□□ -1.97
VTA1Q9NP79 AC107222.1-201ENST00000510899 637 ntBASIC2.76□□□□□ -1.97
VTA1Q9NP79 SERF1AP1-201ENST00000514575 187 ntBASIC2.76□□□□□ -1.97
VTA1Q9NP79 RNU6-1146P-201ENST00000516282 102 ntBASIC2.76□□□□□ -1.97
VTA1Q9NP79 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC2.76□□□□□ -1.97
VTA1Q9NP79 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.76□□□□□ -1.97
VTA1Q9NP79 SDR42E1P4-201ENST00000620894 481 ntBASIC2.76□□□□□ -1.97
VTA1Q9NP79 U6.115-201ENST00000636045 103 ntBASIC2.76□□□□□ -1.97
VTA1Q9NP79 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
VTA1Q9NP79 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
VTA1Q9NP79 AP006437.1-201ENST00000641440 3685 ntBASIC2.75□□□□□ -1.97
VTA1Q9NP79 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.75□□□□□ -1.97
VTA1Q9NP79 Y_RNA.14-201ENST00000362415 103 ntBASIC2.75□□□□□ -1.97
VTA1Q9NP79 RNU6-1240P-201ENST00000365155 104 ntBASIC2.75□□□□□ -1.97
VTA1Q9NP79 RNU6-514P-201ENST00000384208 107 ntBASIC2.75□□□□□ -1.97
VTA1Q9NP79 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.75□□□□□ -1.97
VTA1Q9NP79 U3.40-201ENST00000408706 208 ntBASIC2.75□□□□□ -1.97
VTA1Q9NP79 RN7SKP223-201ENST00000410582 62 ntBASIC2.75□□□□□ -1.97
VTA1Q9NP79 RNU6-57P-201ENST00000411348 103 ntBASIC2.75□□□□□ -1.97
VTA1Q9NP79 AC010531.2-201ENST00000465012 153 ntBASIC2.75□□□□□ -1.97
VTA1Q9NP79 RPS29P21-201ENST00000496272 170 ntBASIC2.75□□□□□ -1.97
VTA1Q9NP79 SNORA31.15-201ENST00000516771 132 ntBASIC2.75□□□□□ -1.97
VTA1Q9NP79 RNU6-856P-201ENST00000516959 98 ntBASIC2.75□□□□□ -1.97
VTA1Q9NP79 AC025647.1-201ENST00000517879 253 ntBASIC2.75□□□□□ -1.97
VTA1Q9NP79 AC021269.2-201ENST00000532318 330 ntBASIC2.75□□□□□ -1.97
VTA1Q9NP79 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.75□□□□□ -1.97
VTA1Q9NP79 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.75□□□□□ -1.97
VTA1Q9NP79 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.75□□□□□ -1.97
VTA1Q9NP79 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 583.1 ms