Protein–RNA interactions for Protein: Q9H4L4

SENP3, Sentrin-specific protease 3, humanhuman

Predicted RBP Predictions only

Length 574 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3Q9H4L4 Y_RNA.375-201ENST00000365625 101 ntBASIC7.01□□□□□ -1.29
SENP3Q9H4L4 SNORA70F-201ENST00000384142 135 ntBASIC7.01□□□□□ -1.29
SENP3Q9H4L4 IGKV1-32-201ENST00000519290 311 ntBASIC7.01□□□□□ -1.29
SENP3Q9H4L4 MIR5089-201ENST00000580047 84 ntBASIC7.01□□□□□ -1.29
SENP3Q9H4L4 MIR3138-201ENST00000585238 82 ntBASIC7.01□□□□□ -1.29
SENP3Q9H4L4 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC7.01□□□□□ -1.29
SENP3Q9H4L4 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
SENP3Q9H4L4 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
SENP3Q9H4L4 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
SENP3Q9H4L4 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
SENP3Q9H4L4 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
SENP3Q9H4L4 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
SENP3Q9H4L4 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
SENP3Q9H4L4 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
SENP3Q9H4L4 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC7□□□□□ -1.29
SENP3Q9H4L4 RPL23AP83-201ENST00000434984 473 ntBASIC7□□□□□ -1.29
SENP3Q9H4L4 RN7SL690P-201ENST00000582087 240 ntBASIC7□□□□□ -1.29
SENP3Q9H4L4 RNA5SP196-201ENST00000625967 102 ntBASIC7□□□□□ -1.29
SENP3Q9H4L4 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
SENP3Q9H4L4 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC7□□□□□ -1.29
SENP3Q9H4L4 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
SENP3Q9H4L4 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
SENP3Q9H4L4 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
SENP3Q9H4L4 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC7□□□□□ -1.29
SENP3Q9H4L4 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
SENP3Q9H4L4 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.99□□□□□ -1.29
SENP3Q9H4L4 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.99□□□□□ -1.29
SENP3Q9H4L4 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SENP3Q9H4L4 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
SENP3Q9H4L4 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
SENP3Q9H4L4 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC6.99□□□□□ -1.29
SENP3Q9H4L4 RNU1-23P-201ENST00000363361 144 ntBASIC6.99□□□□□ -1.29
SENP3Q9H4L4 RNU6-824P-201ENST00000363724 104 ntBASIC6.99□□□□□ -1.29
SENP3Q9H4L4 RNU6-1083P-201ENST00000384022 107 ntBASIC6.99□□□□□ -1.29
SENP3Q9H4L4 MIR129-1-201ENST00000384972 72 ntBASIC6.99□□□□□ -1.29
SENP3Q9H4L4 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
SENP3Q9H4L4 RNU2-19P-201ENST00000517288 84 ntBASIC6.99□□□□□ -1.29
SENP3Q9H4L4 EIF4BP1-201ENST00000554881 351 ntBASIC6.99□□□□□ -1.29
SENP3Q9H4L4 TVP23BP1-201ENST00000557500 617 ntBASIC6.99□□□□□ -1.29
SENP3Q9H4L4 AC002076.2-201ENST00000617362 122 ntBASIC6.99□□□□□ -1.29
SENP3Q9H4L4 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
SENP3Q9H4L4 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
SENP3Q9H4L4 AC092376.2-201ENST00000622621 4116 ntBASIC6.99□□□□□ -1.29
SENP3Q9H4L4 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
SENP3Q9H4L4 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
SENP3Q9H4L4 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC6.98□□□□□ -1.29
SENP3Q9H4L4 RNU1-94P-201ENST00000362627 173 ntBASIC6.98□□□□□ -1.29
SENP3Q9H4L4 RNA5SP509-201ENST00000364577 119 ntBASIC6.98□□□□□ -1.29
SENP3Q9H4L4 RNU1-82P-201ENST00000390851 165 ntBASIC6.98□□□□□ -1.29
SENP3Q9H4L4 AL691482.1-201ENST00000453255 87 ntBASIC6.98□□□□□ -1.29
SENP3Q9H4L4 SCARNA21.1-201ENST00000515996 128 ntBASIC6.98□□□□□ -1.29
SENP3Q9H4L4 AC007179.3-201ENST00000604976 235 ntBASIC6.98□□□□□ -1.29
SENP3Q9H4L4 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
SENP3Q9H4L4 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
SENP3Q9H4L4 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC6.98□□□□□ -1.29
SENP3Q9H4L4 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
SENP3Q9H4L4 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC6.98□□□□□ -1.29
SENP3Q9H4L4 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SENP3Q9H4L4 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC6.97□□□□□ -1.29
SENP3Q9H4L4 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
SENP3Q9H4L4 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SENP3Q9H4L4 SNORD114-6-201ENST00000364393 72 ntBASIC6.97□□□□□ -1.29
SENP3Q9H4L4 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
SENP3Q9H4L4 MTND4LP1-201ENST00000446263 157 ntBASIC6.97□□□□□ -1.29
SENP3Q9H4L4 RPL12P50-201ENST00000603116 116 ntBASIC6.97□□□□□ -1.29
SENP3Q9H4L4 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SENP3Q9H4L4 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
SENP3Q9H4L4 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SENP3Q9H4L4 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC6.97□□□□□ -1.29
SENP3Q9H4L4 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
SENP3Q9H4L4 AP000542.2-201ENST00000623199 6179 ntBASIC6.97□□□□□ -1.29
SENP3Q9H4L4 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
SENP3Q9H4L4 RN7SKP185-201ENST00000362813 326 ntBASIC6.96□□□□□ -1.3
SENP3Q9H4L4 Y_RNA.239-201ENST00000364444 113 ntBASIC6.96□□□□□ -1.3
SENP3Q9H4L4 AL161756.2-201ENST00000604597 246 ntBASIC6.96□□□□□ -1.3
SENP3Q9H4L4 U4.3-201ENST00000621047 82 ntBASIC6.96□□□□□ -1.3
SENP3Q9H4L4 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC6.96□□□□□ -1.3
SENP3Q9H4L4 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
SENP3Q9H4L4 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SENP3Q9H4L4 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC6.95□□□□□ -1.3
SENP3Q9H4L4 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
SENP3Q9H4L4 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
SENP3Q9H4L4 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC6.95□□□□□ -1.3
SENP3Q9H4L4 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC6.95□□□□□ -1.3
SENP3Q9H4L4 Y_RNA.119-201ENST00000363301 96 ntBASIC6.95□□□□□ -1.3
SENP3Q9H4L4 SNORD46.1-201ENST00000364139 104 ntBASIC6.95□□□□□ -1.3
SENP3Q9H4L4 SNORA70C-201ENST00000384538 135 ntBASIC6.95□□□□□ -1.3
SENP3Q9H4L4 MIR767-201ENST00000390228 109 ntBASIC6.95□□□□□ -1.3
SENP3Q9H4L4 RPS29P9-201ENST00000440360 171 ntBASIC6.95□□□□□ -1.3
SENP3Q9H4L4 SNORA31.21-201ENST00000517180 77 ntBASIC6.95□□□□□ -1.3
SENP3Q9H4L4 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC6.95□□□□□ -1.3
SENP3Q9H4L4 MIR4444-1-201ENST00000581696 74 ntBASIC6.95□□□□□ -1.3
SENP3Q9H4L4 MIR4444-2-201ENST00000584390 74 ntBASIC6.95□□□□□ -1.3
SENP3Q9H4L4 AC022726.1-201ENST00000587475 207 ntBASIC6.95□□□□□ -1.3
SENP3Q9H4L4 SNORA62.6-201ENST00000606322 83 ntBASIC6.95□□□□□ -1.3
SENP3Q9H4L4 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
SENP3Q9H4L4 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
SENP3Q9H4L4 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC6.95□□□□□ -1.3
SENP3Q9H4L4 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
SENP3Q9H4L4 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC6.94□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 127.4 ms