Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 Y_RNA.712-201ENST00000517011 92 ntBASIC3.02□□□□□ -1.93
VPS11Q9H270 AC136628.3-201ENST00000521868 290 ntBASIC3.02□□□□□ -1.93
VPS11Q9H270 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.02□□□□□ -1.93
VPS11Q9H270 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.02□□□□□ -1.93
VPS11Q9H270 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC3.02□□□□□ -1.93
VPS11Q9H270 AP001340.1-201ENST00000624405 217 ntBASIC3.02□□□□□ -1.93
VPS11Q9H270 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.02□□□□□ -1.93
VPS11Q9H270 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.02□□□□□ -1.93
VPS11Q9H270 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
VPS11Q9H270 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.01□□□□□ -1.93
VPS11Q9H270 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
VPS11Q9H270 Y_RNA.24-201ENST00000362508 103 ntBASIC3.01□□□□□ -1.93
VPS11Q9H270 RNU6-768P-201ENST00000384683 107 ntBASIC3.01□□□□□ -1.93
VPS11Q9H270 RNU6-220P-201ENST00000390919 107 ntBASIC3.01□□□□□ -1.93
VPS11Q9H270 AL590004.2-201ENST00000404787 371 ntBASIC3.01□□□□□ -1.93
VPS11Q9H270 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC3.01□□□□□ -1.93
VPS11Q9H270 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC3.01□□□□□ -1.93
VPS11Q9H270 Z75741.1-201ENST00000446793 314 ntBASIC3.01□□□□□ -1.93
VPS11Q9H270 PRSS3P4-201ENST00000453323 162 ntBASIC3.01□□□□□ -1.93
VPS11Q9H270 AC007215.1-201ENST00000464893 276 ntBASIC3.01□□□□□ -1.93
VPS11Q9H270 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.01□□□□□ -1.93
VPS11Q9H270 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.01□□□□□ -1.93
VPS11Q9H270 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.01□□□□□ -1.93
VPS11Q9H270 RNU6-1007P-201ENST00000516586 107 ntBASIC3.01□□□□□ -1.93
VPS11Q9H270 CYCSP23-201ENST00000519781 313 ntBASIC3.01□□□□□ -1.93
VPS11Q9H270 MIR3944-201ENST00000581277 108 ntBASIC3.01□□□□□ -1.93
VPS11Q9H270 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.01□□□□□ -1.93
VPS11Q9H270 AL359198.2-201ENST00000611836 194 ntBASIC3.01□□□□□ -1.93
VPS11Q9H270 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC3.01□□□□□ -1.93
VPS11Q9H270 AC007318.2-201ENST00000620999 243 ntBASIC3.01□□□□□ -1.93
VPS11Q9H270 AC018692.3-201ENST00000623929 123 ntBASIC3.01□□□□□ -1.93
VPS11Q9H270 MIR622-201ENST00000638396 96 ntBASIC3.01□□□□□ -1.93
VPS11Q9H270 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.01□□□□□ -1.93
VPS11Q9H270 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
VPS11Q9H270 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3□□□□□ -1.93
VPS11Q9H270 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
VPS11Q9H270 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
VPS11Q9H270 Y_RNA.40-201ENST00000362645 93 ntBASIC3□□□□□ -1.93
VPS11Q9H270 RNU6-1210P-201ENST00000363775 107 ntBASIC3□□□□□ -1.93
VPS11Q9H270 Y_RNA.294-201ENST00000364916 102 ntBASIC3□□□□□ -1.93
VPS11Q9H270 SNORA72.4-201ENST00000384174 132 ntBASIC3□□□□□ -1.93
VPS11Q9H270 SNORA7.4-201ENST00000384249 137 ntBASIC3□□□□□ -1.93
VPS11Q9H270 SNORA8.3-201ENST00000384679 139 ntBASIC3□□□□□ -1.93
VPS11Q9H270 MT-TT-201ENST00000387460 66 ntBASIC3□□□□□ -1.93
VPS11Q9H270 RNA5SP89-201ENST00000410300 108 ntBASIC3□□□□□ -1.93
VPS11Q9H270 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3□□□□□ -1.93
VPS11Q9H270 AC012306.1-201ENST00000423267 114 ntBASIC3□□□□□ -1.93
VPS11Q9H270 AIMP1P2-201ENST00000425294 312 ntBASIC3□□□□□ -1.93
VPS11Q9H270 AC078809.1-201ENST00000427601 140 ntBASIC3□□□□□ -1.93
VPS11Q9H270 AC245047.8-201ENST00000456455 284 ntBASIC3□□□□□ -1.93
VPS11Q9H270 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3□□□□□ -1.93
VPS11Q9H270 AC021231.3-201ENST00000558497 370 ntBASIC3□□□□□ -1.93
VPS11Q9H270 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3□□□□□ -1.93
VPS11Q9H270 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3□□□□□ -1.93
VPS11Q9H270 AL449363.1-201ENST00000617815 186 ntBASIC3□□□□□ -1.93
VPS11Q9H270 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
VPS11Q9H270 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.99□□□□□ -1.93
VPS11Q9H270 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
VPS11Q9H270 AC073325.2-201ENST00000339545 159 ntBASIC2.99□□□□□ -1.93
VPS11Q9H270 SNORA63.1-201ENST00000362493 131 ntBASIC2.99□□□□□ -1.93
VPS11Q9H270 RNU6-969P-201ENST00000383900 105 ntBASIC2.99□□□□□ -1.93
VPS11Q9H270 SNORA22-201ENST00000383907 134 ntBASIC2.99□□□□□ -1.93
VPS11Q9H270 RNU6-643P-201ENST00000384018 107 ntBASIC2.99□□□□□ -1.93
VPS11Q9H270 RNU6-1310P-201ENST00000384153 107 ntBASIC2.99□□□□□ -1.93
VPS11Q9H270 MIR616-201ENST00000385293 97 ntBASIC2.99□□□□□ -1.93
VPS11Q9H270 SNORA40.5-201ENST00000391061 128 ntBASIC2.99□□□□□ -1.93
VPS11Q9H270 SNORD37.2-201ENST00000391075 66 ntBASIC2.99□□□□□ -1.93
VPS11Q9H270 CBX3P9-201ENST00000402326 552 ntBASIC2.99□□□□□ -1.93
VPS11Q9H270 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.99□□□□□ -1.93
VPS11Q9H270 AC244670.1-201ENST00000436879 112 ntBASIC2.99□□□□□ -1.93
VPS11Q9H270 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.99□□□□□ -1.93
VPS11Q9H270 AC091826.1-201ENST00000514065 313 ntBASIC2.99□□□□□ -1.93
VPS11Q9H270 RNU2-56P-201ENST00000516826 190 ntBASIC2.99□□□□□ -1.93
VPS11Q9H270 AP001328.1-201ENST00000528550 176 ntBASIC2.99□□□□□ -1.93
VPS11Q9H270 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.99□□□□□ -1.93
VPS11Q9H270 U7.2-201ENST00000607576 63 ntBASIC2.99□□□□□ -1.93
VPS11Q9H270 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
VPS11Q9H270 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
VPS11Q9H270 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
VPS11Q9H270 AC092268.1-201ENST00000342691 405 ntBASIC2.98□□□□□ -1.93
VPS11Q9H270 RNU1-72P-201ENST00000362976 153 ntBASIC2.98□□□□□ -1.93
VPS11Q9H270 RNU6-324P-201ENST00000363957 106 ntBASIC2.98□□□□□ -1.93
VPS11Q9H270 SNORD115-30-201ENST00000364117 82 ntBASIC2.98□□□□□ -1.93
VPS11Q9H270 Y_RNA.293-201ENST00000364908 93 ntBASIC2.98□□□□□ -1.93
VPS11Q9H270 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.98□□□□□ -1.93
VPS11Q9H270 RNU1-109P-201ENST00000383960 147 ntBASIC2.98□□□□□ -1.93
VPS11Q9H270 RNU6-588P-201ENST00000410281 105 ntBASIC2.98□□□□□ -1.93
VPS11Q9H270 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.98□□□□□ -1.93
VPS11Q9H270 AIG1P1-201ENST00000503376 148 ntBASIC2.98□□□□□ -1.93
VPS11Q9H270 RPL30P11-203ENST00000598995 310 ntBASIC2.98□□□□□ -1.93
VPS11Q9H270 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.98□□□□□ -1.93
VPS11Q9H270 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
VPS11Q9H270 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.98□□□□□ -1.93
VPS11Q9H270 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
VPS11Q9H270 MIR22-201ENST00000362190 85 ntBASIC2.97□□□□□ -1.93
VPS11Q9H270 SNORD46.1-201ENST00000364139 104 ntBASIC2.97□□□□□ -1.93
VPS11Q9H270 Y_RNA.287-201ENST00000364853 94 ntBASIC2.97□□□□□ -1.93
VPS11Q9H270 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
VPS11Q9H270 Y_RNA.415-201ENST00000384012 112 ntBASIC2.97□□□□□ -1.93
VPS11Q9H270 RNU6-245P-201ENST00000384020 107 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 163.8 ms