Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
RNF38Q9H0F5 AC093908.1-201ENST00000623125 8092 ntBASIC3.15□□□□□ -1.9
RNF38Q9H0F5 AC080128.1-201ENST00000474389 1917 ntBASIC3.15□□□□□ -1.9
RNF38Q9H0F5 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
RNF38Q9H0F5 RNU6-199P-201ENST00000362954 107 ntBASIC3.15□□□□□ -1.91
RNF38Q9H0F5 RNU6-1210P-201ENST00000363775 107 ntBASIC3.15□□□□□ -1.91
RNF38Q9H0F5 RNU6-899P-201ENST00000363947 107 ntBASIC3.15□□□□□ -1.91
RNF38Q9H0F5 Y_RNA.243-201ENST00000364481 109 ntBASIC3.15□□□□□ -1.91
RNF38Q9H0F5 SNORD20-201ENST00000384550 80 ntBASIC3.15□□□□□ -1.91
RNF38Q9H0F5 RNU6-710P-201ENST00000410424 105 ntBASIC3.15□□□□□ -1.91
RNF38Q9H0F5 EEF1A1P41-201ENST00000414667 207 ntBASIC3.15□□□□□ -1.91
RNF38Q9H0F5 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.15□□□□□ -1.91
RNF38Q9H0F5 RPL30P13-201ENST00000418873 348 ntBASIC3.15□□□□□ -1.91
RNF38Q9H0F5 MTND4LP9-201ENST00000427694 174 ntBASIC3.15□□□□□ -1.91
RNF38Q9H0F5 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.15□□□□□ -1.91
RNF38Q9H0F5 AC008267.6-201ENST00000441664 139 ntBASIC3.15□□□□□ -1.91
RNF38Q9H0F5 AC025750.2-201ENST00000442609 450 ntBASIC3.15□□□□□ -1.91
RNF38Q9H0F5 RNU7-141P-201ENST00000459304 62 ntBASIC3.15□□□□□ -1.91
RNF38Q9H0F5 SNORA59A-201ENST00000459326 152 ntBASIC3.15□□□□□ -1.91
RNF38Q9H0F5 AC245166.1-201ENST00000521012 253 ntBASIC3.15□□□□□ -1.91
RNF38Q9H0F5 DNAJC19P2-201ENST00000593340 302 ntBASIC3.15□□□□□ -1.91
RNF38Q9H0F5 U6.115-201ENST00000636045 103 ntBASIC3.15□□□□□ -1.91
RNF38Q9H0F5 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
RNF38Q9H0F5 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
RNF38Q9H0F5 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
RNF38Q9H0F5 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.14□□□□□ -1.91
RNF38Q9H0F5 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RNF38Q9H0F5 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.14□□□□□ -1.91
RNF38Q9H0F5 AC073325.2-201ENST00000339545 159 ntBASIC3.14□□□□□ -1.91
RNF38Q9H0F5 RNU6-1205P-201ENST00000363625 106 ntBASIC3.14□□□□□ -1.91
RNF38Q9H0F5 Y_RNA.218-201ENST00000364218 104 ntBASIC3.14□□□□□ -1.91
RNF38Q9H0F5 RNU6-1305P-201ENST00000364353 104 ntBASIC3.14□□□□□ -1.91
RNF38Q9H0F5 MIR548B-201ENST00000385247 97 ntBASIC3.14□□□□□ -1.91
RNF38Q9H0F5 MT-TT-201ENST00000387460 66 ntBASIC3.14□□□□□ -1.91
RNF38Q9H0F5 RPL30P4-201ENST00000429309 333 ntBASIC3.14□□□□□ -1.91
RNF38Q9H0F5 AC107083.1-201ENST00000439643 279 ntBASIC3.14□□□□□ -1.91
RNF38Q9H0F5 AL121914.1-201ENST00000450188 156 ntBASIC3.14□□□□□ -1.91
RNF38Q9H0F5 AL137159.1-201ENST00000452808 512 ntBASIC3.14□□□□□ -1.91
RNF38Q9H0F5 RPS3P1-201ENST00000456781 192 ntBASIC3.14□□□□□ -1.91
RNF38Q9H0F5 RNU6-1211P-201ENST00000459179 105 ntBASIC3.14□□□□□ -1.91
RNF38Q9H0F5 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.14□□□□□ -1.91
RNF38Q9H0F5 AC007318.2-201ENST00000620999 243 ntBASIC3.14□□□□□ -1.91
RNF38Q9H0F5 SCARNA15.3-201ENST00000626315 122 ntBASIC3.14□□□□□ -1.91
RNF38Q9H0F5 SCARNA4.1-201ENST00000628597 123 ntBASIC3.14□□□□□ -1.91
RNF38Q9H0F5 AC069528.2-201ENST00000624849 1991 ntBASIC3.14□□□□□ -1.91
RNF38Q9H0F5 AC000403.1-201ENST00000613696 3585 ntBASIC3.13□□□□□ -1.91
RNF38Q9H0F5 AC026241.1-201ENST00000517873 2142 ntBASIC3.13□□□□□ -1.91
RNF38Q9H0F5 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
RNF38Q9H0F5 Y_RNA.368-201ENST00000365547 113 ntBASIC3.13□□□□□ -1.91
RNF38Q9H0F5 SNORD37.2-201ENST00000391075 66 ntBASIC3.13□□□□□ -1.91
RNF38Q9H0F5 AL355497.1-201ENST00000406262 551 ntBASIC3.13□□□□□ -1.91
RNF38Q9H0F5 U6atac.2-201ENST00000408644 118 ntBASIC3.13□□□□□ -1.91
RNF38Q9H0F5 Y_RNA.629-201ENST00000411368 105 ntBASIC3.13□□□□□ -1.91
RNF38Q9H0F5 AC022018.1-201ENST00000430685 241 ntBASIC3.13□□□□□ -1.91
RNF38Q9H0F5 AL139132.1-201ENST00000431587 344 ntBASIC3.13□□□□□ -1.91
RNF38Q9H0F5 AC244505.4-201ENST00000434905 287 ntBASIC3.13□□□□□ -1.91
RNF38Q9H0F5 SSXP5-201ENST00000443473 287 ntBASIC3.13□□□□□ -1.91
RNF38Q9H0F5 Z96811.1-201ENST00000445880 108 ntBASIC3.13□□□□□ -1.91
RNF38Q9H0F5 RN7SL20P-201ENST00000488827 297 ntBASIC3.13□□□□□ -1.91
RNF38Q9H0F5 AC023141.11-201ENST00000508864 202 ntBASIC3.13□□□□□ -1.91
RNF38Q9H0F5 RNU6-1333P-201ENST00000516162 93 ntBASIC3.13□□□□□ -1.91
RNF38Q9H0F5 RNU6-1234P-201ENST00000516877 103 ntBASIC3.13□□□□□ -1.91
RNF38Q9H0F5 RPL30P11-203ENST00000598995 310 ntBASIC3.13□□□□□ -1.91
RNF38Q9H0F5 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.13□□□□□ -1.91
RNF38Q9H0F5 AC004832.5-201ENST00000608677 401 ntBASIC3.13□□□□□ -1.91
RNF38Q9H0F5 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RNF38Q9H0F5 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
RNF38Q9H0F5 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC3.12□□□□□ -1.91
RNF38Q9H0F5 U3.8-201ENST00000363675 217 ntBASIC3.12□□□□□ -1.91
RNF38Q9H0F5 RNU6-461P-201ENST00000364195 107 ntBASIC3.12□□□□□ -1.91
RNF38Q9H0F5 Y_RNA.310-201ENST00000365063 113 ntBASIC3.12□□□□□ -1.91
RNF38Q9H0F5 Y_RNA.420-201ENST00000384043 110 ntBASIC3.12□□□□□ -1.91
RNF38Q9H0F5 SNORA67.2-201ENST00000384300 149 ntBASIC3.12□□□□□ -1.91
RNF38Q9H0F5 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.12□□□□□ -1.91
RNF38Q9H0F5 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.12□□□□□ -1.91
RNF38Q9H0F5 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.12□□□□□ -1.91
RNF38Q9H0F5 RNA5SP217-201ENST00000515959 91 ntBASIC3.12□□□□□ -1.91
RNF38Q9H0F5 AC105245.1-201ENST00000581934 244 ntBASIC3.12□□□□□ -1.91
RNF38Q9H0F5 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.12□□□□□ -1.91
RNF38Q9H0F5 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
RNF38Q9H0F5 AL365361.1-201ENST00000566942 3481 ntBASIC3.12□□□□□ -1.91
RNF38Q9H0F5 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.12□□□□□ -1.91
RNF38Q9H0F5 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RNF38Q9H0F5 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RNF38Q9H0F5 Y_RNA.71-201ENST00000362892 104 ntBASIC3.11□□□□□ -1.91
RNF38Q9H0F5 Y_RNA.124-201ENST00000363339 93 ntBASIC3.11□□□□□ -1.91
RNF38Q9H0F5 Y_RNA.172-201ENST00000363765 102 ntBASIC3.11□□□□□ -1.91
RNF38Q9H0F5 RNU6-407P-201ENST00000365280 104 ntBASIC3.11□□□□□ -1.91
RNF38Q9H0F5 Y_RNA.456-201ENST00000384232 111 ntBASIC3.11□□□□□ -1.91
RNF38Q9H0F5 Y_RNA.510-201ENST00000384511 114 ntBASIC3.11□□□□□ -1.91
RNF38Q9H0F5 MIR616-201ENST00000385293 97 ntBASIC3.11□□□□□ -1.91
RNF38Q9H0F5 AL139281.1-201ENST00000422120 335 ntBASIC3.11□□□□□ -1.91
RNF38Q9H0F5 HSPE1P21-201ENST00000438283 308 ntBASIC3.11□□□□□ -1.91
RNF38Q9H0F5 AC114982.1-201ENST00000469402 321 ntBASIC3.11□□□□□ -1.91
RNF38Q9H0F5 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC3.11□□□□□ -1.91
RNF38Q9H0F5 RNU6-561P-201ENST00000516222 102 ntBASIC3.11□□□□□ -1.91
RNF38Q9H0F5 AL359881.1-201ENST00000602916 267 ntBASIC3.11□□□□□ -1.91
RNF38Q9H0F5 AC025754.2-201ENST00000606491 432 ntBASIC3.11□□□□□ -1.91
RNF38Q9H0F5 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.1□□□□□ -1.91
RNF38Q9H0F5 MIR367-201ENST00000362299 68 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms