Protein–RNA interactions for Protein: Q99250

SCN2A, Sodium channel protein type 2 subunit alpha, humanhuman

Predictions only

Length 2,005 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2AQ99250 AC025253.1-201ENST00000613623 543 ntBASIC1.25□□□□□ -2.21
SCN2AQ99250 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.25□□□□□ -2.21
SCN2AQ99250 RNA5SP276-201ENST00000362580 94 ntBASIC1.24□□□□□ -2.21
SCN2AQ99250 Y_RNA.122-201ENST00000363331 96 ntBASIC1.24□□□□□ -2.21
SCN2AQ99250 RNU6-281P-201ENST00000384212 103 ntBASIC1.24□□□□□ -2.21
SCN2AQ99250 RNY3P14-201ENST00000384309 102 ntBASIC1.24□□□□□ -2.21
SCN2AQ99250 RNU6-700P-201ENST00000391043 107 ntBASIC1.24□□□□□ -2.21
SCN2AQ99250 RNU1-139P-201ENST00000391307 165 ntBASIC1.24□□□□□ -2.21
SCN2AQ99250 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.24□□□□□ -2.21
SCN2AQ99250 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.24□□□□□ -2.21
SCN2AQ99250 RNU6-221P-201ENST00000459541 99 ntBASIC1.24□□□□□ -2.21
SCN2AQ99250 Y_RNA.708-201ENST00000516950 96 ntBASIC1.24□□□□□ -2.21
SCN2AQ99250 Y_RNA.718-201ENST00000517110 102 ntBASIC1.24□□□□□ -2.21
SCN2AQ99250 SNORA31.24-201ENST00000517232 57 ntBASIC1.24□□□□□ -2.21
SCN2AQ99250 AC093023.1-201ENST00000547375 507 ntBASIC1.24□□□□□ -2.21
SCN2AQ99250 RRN3P3-201ENST00000549207 578 ntBASIC1.24□□□□□ -2.21
SCN2AQ99250 AL121579.1-201ENST00000555129 305 ntBASIC1.24□□□□□ -2.21
SCN2AQ99250 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.24□□□□□ -2.21
SCN2AQ99250 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.24□□□□□ -2.21
SCN2AQ99250 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.24□□□□□ -2.21
SCN2AQ99250 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
SCN2AQ99250 Y_RNA.184-201ENST00000363884 108 ntBASIC1.23□□□□□ -2.21
SCN2AQ99250 RNY1P14-201ENST00000384426 108 ntBASIC1.23□□□□□ -2.21
SCN2AQ99250 MIR487A-201ENST00000385009 80 ntBASIC1.23□□□□□ -2.21
SCN2AQ99250 MIR548K-201ENST00000408406 116 ntBASIC1.23□□□□□ -2.21
SCN2AQ99250 RNA5SP501-201ENST00000410990 112 ntBASIC1.23□□□□□ -2.21
SCN2AQ99250 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.23□□□□□ -2.21
SCN2AQ99250 RPL23AP50-201ENST00000434149 455 ntBASIC1.23□□□□□ -2.21
SCN2AQ99250 RNU7-57P-201ENST00000459540 60 ntBASIC1.23□□□□□ -2.21
SCN2AQ99250 AC018710.1-201ENST00000506509 158 ntBASIC1.23□□□□□ -2.21
SCN2AQ99250 Y_RNA.683-201ENST00000516508 93 ntBASIC1.23□□□□□ -2.21
SCN2AQ99250 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.23□□□□□ -2.21
SCN2AQ99250 MIR4299-201ENST00000577899 72 ntBASIC1.23□□□□□ -2.21
SCN2AQ99250 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.23□□□□□ -2.21
SCN2AQ99250 MIR8074-201ENST00000615081 81 ntBASIC1.23□□□□□ -2.21
SCN2AQ99250 AC063943.3-201ENST00000615562 356 ntBASIC1.23□□□□□ -2.21
SCN2AQ99250 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.23□□□□□ -2.21
SCN2AQ99250 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.23□□□□□ -2.21
SCN2AQ99250 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.23□□□□□ -2.21
SCN2AQ99250 Y_RNA.142-201ENST00000363491 102 ntBASIC1.23□□□□□ -2.21
SCN2AQ99250 RNU6-414P-201ENST00000363705 104 ntBASIC1.23□□□□□ -2.21
SCN2AQ99250 RNU6-1305P-201ENST00000364353 104 ntBASIC1.23□□□□□ -2.21
SCN2AQ99250 RNU6-1164P-201ENST00000364428 107 ntBASIC1.23□□□□□ -2.21
SCN2AQ99250 RNU6-767P-201ENST00000384132 107 ntBASIC1.23□□□□□ -2.21
SCN2AQ99250 Y_RNA.474-201ENST00000384341 102 ntBASIC1.23□□□□□ -2.21
SCN2AQ99250 RNU6-417P-201ENST00000384712 107 ntBASIC1.23□□□□□ -2.21
SCN2AQ99250 MIR32-201ENST00000384965 70 ntBASIC1.23□□□□□ -2.21
SCN2AQ99250 AC087343.1-201ENST00000477341 475 ntBASIC1.23□□□□□ -2.21
SCN2AQ99250 RNU6-1278P-201ENST00000516130 107 ntBASIC1.23□□□□□ -2.21
SCN2AQ99250 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.23□□□□□ -2.21
SCN2AQ99250 AC084364.2-201ENST00000546924 395 ntBASIC1.23□□□□□ -2.21
SCN2AQ99250 MIR3660-201ENST00000584845 100 ntBASIC1.23□□□□□ -2.21
SCN2AQ99250 AC112487.2-201ENST00000637950 304 ntBASIC1.23□□□□□ -2.21
SCN2AQ99250 AC099654.14-201ENST00000638599 341 ntBASIC1.23□□□□□ -2.21
SCN2AQ99250 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.22□□□□□ -2.21
SCN2AQ99250 MIR340-201ENST00000362125 95 ntBASIC1.22□□□□□ -2.21
SCN2AQ99250 RNU6-1059P-201ENST00000363752 98 ntBASIC1.22□□□□□ -2.21
SCN2AQ99250 RNU6-1240P-201ENST00000365155 104 ntBASIC1.22□□□□□ -2.21
SCN2AQ99250 RNU6-418P-201ENST00000384035 107 ntBASIC1.22□□□□□ -2.21
SCN2AQ99250 RNA5SP100-201ENST00000410903 110 ntBASIC1.22□□□□□ -2.21
SCN2AQ99250 RNA5SP59-201ENST00000410922 110 ntBASIC1.22□□□□□ -2.21
SCN2AQ99250 RNU6-57P-201ENST00000411348 103 ntBASIC1.22□□□□□ -2.21
SCN2AQ99250 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.22□□□□□ -2.21
SCN2AQ99250 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.22□□□□□ -2.21
SCN2AQ99250 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.22□□□□□ -2.21
SCN2AQ99250 AC134698.4-201ENST00000523451 826 ntBASIC1.22□□□□□ -2.21
SCN2AQ99250 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.22□□□□□ -2.21
SCN2AQ99250 AK6P2-201ENST00000549020 471 ntBASIC1.22□□□□□ -2.21
SCN2AQ99250 AL355073.2-201ENST00000612106 557 ntBASIC1.22□□□□□ -2.21
SCN2AQ99250 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.22□□□□□ -2.21
SCN2AQ99250 AC083806.3-201ENST00000614016 455 ntBASIC1.22□□□□□ -2.21
SCN2AQ99250 U1.36-201ENST00000620684 176 ntBASIC1.22□□□□□ -2.21
SCN2AQ99250 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.22□□□□□ -2.21
SCN2AQ99250 AC006435.5-201ENST00000624486 112 ntBASIC1.22□□□□□ -2.21
SCN2AQ99250 MTND4P12-201ENST00000498999 1377 ntBASIC1.22□□□□□ -2.21
SCN2AQ99250 MIR410-201ENST00000362222 80 ntBASIC1.22□□□□□ -2.21
SCN2AQ99250 RNU4-9P-201ENST00000364951 139 ntBASIC1.22□□□□□ -2.21
SCN2AQ99250 Y_RNA.415-201ENST00000384012 112 ntBASIC1.22□□□□□ -2.21
SCN2AQ99250 RNU6-1145P-201ENST00000384246 107 ntBASIC1.22□□□□□ -2.21
SCN2AQ99250 RNY3P4-201ENST00000384428 101 ntBASIC1.22□□□□□ -2.21
SCN2AQ99250 MIR597-201ENST00000384968 97 ntBASIC1.22□□□□□ -2.21
SCN2AQ99250 MIR320A-201ENST00000385302 82 ntBASIC1.22□□□□□ -2.21
SCN2AQ99250 PDCL2P1-201ENST00000419302 352 ntBASIC1.22□□□□□ -2.21
SCN2AQ99250 AC244636.1-201ENST00000421152 228 ntBASIC1.22□□□□□ -2.21
SCN2AQ99250 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.22□□□□□ -2.21
SCN2AQ99250 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.22□□□□□ -2.21
SCN2AQ99250 RNU6-470P-201ENST00000515954 104 ntBASIC1.22□□□□□ -2.21
SCN2AQ99250 RNU6-559P-201ENST00000516151 98 ntBASIC1.22□□□□□ -2.21
SCN2AQ99250 RNA5SP220-201ENST00000516298 104 ntBASIC1.22□□□□□ -2.21
SCN2AQ99250 RNA5SP437-201ENST00000517249 129 ntBASIC1.22□□□□□ -2.21
SCN2AQ99250 AL355375.2-201ENST00000574825 175 ntBASIC1.22□□□□□ -2.21
SCN2AQ99250 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.22□□□□□ -2.21
SCN2AQ99250 Y_RNA.27-201ENST00000362540 103 ntBASIC1.21□□□□□ -2.22
SCN2AQ99250 MIR513A1-201ENST00000385138 129 ntBASIC1.21□□□□□ -2.22
SCN2AQ99250 RNY4P36-201ENST00000391116 96 ntBASIC1.21□□□□□ -2.22
SCN2AQ99250 RPS27P16-201ENST00000425758 201 ntBASIC1.21□□□□□ -2.22
SCN2AQ99250 RPL23AP6-201ENST00000446637 472 ntBASIC1.21□□□□□ -2.22
SCN2AQ99250 AC016717.1-201ENST00000448918 286 ntBASIC1.21□□□□□ -2.22
SCN2AQ99250 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.21□□□□□ -2.22
SCN2AQ99250 SNORA44.1-201ENST00000517031 108 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms