Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC-0.6□□□□□ -2.5
IFT140Q96RY7 AC114811.1-201ENST00000507207 168 ntBASIC-0.6□□□□□ -2.5
IFT140Q96RY7 RNU6-58P-201ENST00000517143 103 ntBASIC-0.6□□□□□ -2.5
IFT140Q96RY7 AC107934.1-201ENST00000522215 217 ntBASIC-0.6□□□□□ -2.5
IFT140Q96RY7 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC-0.6□□□□□ -2.5
IFT140Q96RY7 MIR4723-201ENST00000585070 81 ntBASIC-0.6□□□□□ -2.5
IFT140Q96RY7 AC008521.1-201ENST00000587471 187 ntBASIC-0.6□□□□□ -2.5
IFT140Q96RY7 AC104260.1-201ENST00000616660 539 ntBASIC-0.6□□□□□ -2.5
IFT140Q96RY7 MIR6755-201ENST00000619993 66 ntBASIC-0.6□□□□□ -2.5
IFT140Q96RY7 AC098679.4-201ENST00000624241 654 ntBASIC-0.6□□□□□ -2.5
IFT140Q96RY7 Y_RNA.168-201ENST00000363740 102 ntBASIC-0.61□□□□□ -2.51
IFT140Q96RY7 RNU6-560P-201ENST00000364007 108 ntBASIC-0.61□□□□□ -2.51
IFT140Q96RY7 RNU6-609P-201ENST00000365459 107 ntBASIC-0.61□□□□□ -2.51
IFT140Q96RY7 Y_RNA.567-201ENST00000384736 106 ntBASIC-0.61□□□□□ -2.51
IFT140Q96RY7 RNA5SP482-201ENST00000391269 118 ntBASIC-0.61□□□□□ -2.51
IFT140Q96RY7 HMGN2P26-201ENST00000463169 339 ntBASIC-0.61□□□□□ -2.51
IFT140Q96RY7 RNU6-334P-201ENST00000517072 102 ntBASIC-0.61□□□□□ -2.51
IFT140Q96RY7 RNU6-1116P-201ENST00000517269 99 ntBASIC-0.61□□□□□ -2.51
IFT140Q96RY7 AC104383.1-201ENST00000530297 370 ntBASIC-0.61□□□□□ -2.51
IFT140Q96RY7 AC103996.1-201ENST00000555468 102 ntBASIC-0.61□□□□□ -2.51
IFT140Q96RY7 AC012433.1-201ENST00000588916 398 ntBASIC-0.61□□□□□ -2.51
IFT140Q96RY7 AC010999.1-201ENST00000611856 324 ntBASIC-0.61□□□□□ -2.51
IFT140Q96RY7 AC099786.3-201ENST00000565735 1410 ntBASIC-0.61□□□□□ -2.51
IFT140Q96RY7 SNORD56.2-201ENST00000363242 71 ntBASIC-0.61□□□□□ -2.51
IFT140Q96RY7 SNORA1.1-201ENST00000364671 133 ntBASIC-0.61□□□□□ -2.51
IFT140Q96RY7 RNU6-934P-201ENST00000365154 107 ntBASIC-0.61□□□□□ -2.51
IFT140Q96RY7 SNORA24.1-201ENST00000384401 135 ntBASIC-0.61□□□□□ -2.51
IFT140Q96RY7 RNU6-613P-201ENST00000410412 108 ntBASIC-0.61□□□□□ -2.51
IFT140Q96RY7 AC004866.1-201ENST00000411748 78 ntBASIC-0.61□□□□□ -2.51
IFT140Q96RY7 MTND4P3-201ENST00000417829 541 ntBASIC-0.61□□□□□ -2.51
IFT140Q96RY7 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC-0.61□□□□□ -2.51
IFT140Q96RY7 SNORA74.3-201ENST00000517108 154 ntBASIC-0.61□□□□□ -2.51
IFT140Q96RY7 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC-0.61□□□□□ -2.51
IFT140Q96RY7 MIR4804-201ENST00000581683 73 ntBASIC-0.61□□□□□ -2.51
IFT140Q96RY7 AP001836.1-201ENST00000604675 523 ntBASIC-0.61□□□□□ -2.51
IFT140Q96RY7 AC121334.2-201ENST00000605387 271 ntBASIC-0.61□□□□□ -2.51
IFT140Q96RY7 RNY4P24-201ENST00000362735 96 ntBASIC-0.62□□□□□ -2.51
IFT140Q96RY7 SNORD100-201ENST00000408573 76 ntBASIC-0.62□□□□□ -2.51
IFT140Q96RY7 MIR1185-2-201ENST00000408687 86 ntBASIC-0.62□□□□□ -2.51
IFT140Q96RY7 RNU4-46P-201ENST00000410818 138 ntBASIC-0.62□□□□□ -2.51
IFT140Q96RY7 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC-0.62□□□□□ -2.51
IFT140Q96RY7 AC068587.4-201ENST00000533893 186 ntBASIC-0.62□□□□□ -2.51
IFT140Q96RY7 AC009712.1-201ENST00000564938 316 ntBASIC-0.62□□□□□ -2.51
IFT140Q96RY7 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC-0.62□□□□□ -2.51
IFT140Q96RY7 ZNF204P-201ENST00000416749 2397 ntBASIC-0.63□□□□□ -2.51
IFT140Q96RY7 RNU6-723P-201ENST00000383973 107 ntBASIC-0.63□□□□□ -2.51
IFT140Q96RY7 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.63□□□□□ -2.51
IFT140Q96RY7 MTND3P20-201ENST00000407663 186 ntBASIC-0.63□□□□□ -2.51
IFT140Q96RY7 MIR1302-7-201ENST00000408841 72 ntBASIC-0.63□□□□□ -2.51
IFT140Q96RY7 MIR548H2-201ENST00000408874 88 ntBASIC-0.63□□□□□ -2.51
IFT140Q96RY7 ZNF885P-201ENST00000420174 1098 ntBASIC-0.63□□□□□ -2.51
IFT140Q96RY7 AC069271.1-201ENST00000445577 156 ntBASIC-0.63□□□□□ -2.51
IFT140Q96RY7 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC-0.63□□□□□ -2.51
IFT140Q96RY7 RNU6-1028P-201ENST00000517164 93 ntBASIC-0.63□□□□□ -2.51
IFT140Q96RY7 AC007751.1-201ENST00000529260 376 ntBASIC-0.63□□□□□ -2.51
IFT140Q96RY7 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC-0.63□□□□□ -2.51
IFT140Q96RY7 Y_RNA.267-201ENST00000364679 109 ntBASIC-0.64□□□□□ -2.51
IFT140Q96RY7 SNORD14.1-201ENST00000365609 90 ntBASIC-0.64□□□□□ -2.51
IFT140Q96RY7 SNORA67.2-201ENST00000384300 149 ntBASIC-0.64□□□□□ -2.51
IFT140Q96RY7 MIR454-201ENST00000390180 115 ntBASIC-0.64□□□□□ -2.51
IFT140Q96RY7 ZNF736P12Y-201ENST00000443152 1243 ntBASIC-0.64□□□□□ -2.51
IFT140Q96RY7 ZNF736P4Y-201ENST00000454995 1243 ntBASIC-0.64□□□□□ -2.51
IFT140Q96RY7 RPS29P27-201ENST00000463711 170 ntBASIC-0.64□□□□□ -2.51
IFT140Q96RY7 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC-0.64□□□□□ -2.51
IFT140Q96RY7 MRPS36P4-201ENST00000534436 298 ntBASIC-0.64□□□□□ -2.51
IFT140Q96RY7 AC092447.9-201ENST00000603395 144 ntBASIC-0.64□□□□□ -2.51
IFT140Q96RY7 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.64□□□□□ -2.51
IFT140Q96RY7 FER-210ENST00000628534 558 ntTSL 5 BASIC-0.64□□□□□ -2.51
IFT140Q96RY7 Y_RNA.48-201ENST00000362710 103 ntBASIC-0.65□□□□□ -2.51
IFT140Q96RY7 MIR562-201ENST00000384894 95 ntBASIC-0.65□□□□□ -2.51
IFT140Q96RY7 MIR452-201ENST00000385020 85 ntBASIC-0.65□□□□□ -2.51
IFT140Q96RY7 RNU6-269P-201ENST00000391077 97 ntBASIC-0.65□□□□□ -2.51
IFT140Q96RY7 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC-0.65□□□□□ -2.51
IFT140Q96RY7 PCNPP5-201ENST00000452246 481 ntBASIC-0.65□□□□□ -2.51
IFT140Q96RY7 RNU7-165P-201ENST00000458864 60 ntBASIC-0.65□□□□□ -2.51
IFT140Q96RY7 RPL17P19-201ENST00000489069 552 ntBASIC-0.65□□□□□ -2.51
IFT140Q96RY7 RNA5SP454-201ENST00000517231 127 ntBASIC-0.65□□□□□ -2.51
IFT140Q96RY7 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC-0.65□□□□□ -2.51
IFT140Q96RY7 FRG2DP-202ENST00000566967 323 ntBASIC-0.65□□□□□ -2.51
IFT140Q96RY7 MTND3P13-201ENST00000574391 343 ntBASIC-0.65□□□□□ -2.51
IFT140Q96RY7 MIR4438-201ENST00000585271 93 ntBASIC-0.65□□□□□ -2.51
IFT140Q96RY7 AC025449.1-201ENST00000603896 529 ntBASIC-0.65□□□□□ -2.51
IFT140Q96RY7 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC-0.65□□□□□ -2.51
IFT140Q96RY7 RNU6-1266P-201ENST00000362794 105 ntBASIC-0.66□□□□□ -2.51
IFT140Q96RY7 RNU6-137P-201ENST00000363680 108 ntBASIC-0.66□□□□□ -2.51
IFT140Q96RY7 RNU2-8P-201ENST00000410727 190 ntBASIC-0.66□□□□□ -2.51
IFT140Q96RY7 AC098592.1-201ENST00000419352 333 ntBASIC-0.66□□□□□ -2.51
IFT140Q96RY7 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC-0.66□□□□□ -2.51
IFT140Q96RY7 RPL17P35-201ENST00000432217 549 ntBASIC-0.66□□□□□ -2.51
IFT140Q96RY7 AL031274.1-201ENST00000450334 232 ntBASIC-0.66□□□□□ -2.51
IFT140Q96RY7 MTND1P12-201ENST00000455231 147 ntBASIC-0.66□□□□□ -2.51
IFT140Q96RY7 MIR2115-201ENST00000516657 100 ntBASIC-0.66□□□□□ -2.51
IFT140Q96RY7 RNU6-201P-201ENST00000517100 61 ntBASIC-0.66□□□□□ -2.51
IFT140Q96RY7 MIR4771-2-201ENST00000577758 74 ntBASIC-0.66□□□□□ -2.51
IFT140Q96RY7 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC-0.66□□□□□ -2.51
IFT140Q96RY7 MIR4771-1-201ENST00000582617 74 ntBASIC-0.66□□□□□ -2.51
IFT140Q96RY7 uc_338.36-201ENST00000622331 158 ntBASIC-0.66□□□□□ -2.51
IFT140Q96RY7 SNORA1B-201ENST00000362535 133 ntBASIC-0.67□□□□□ -2.52
IFT140Q96RY7 Y_RNA.376-201ENST00000365638 108 ntBASIC-0.67□□□□□ -2.52
IFT140Q96RY7 MIR760-201ENST00000390220 80 ntBASIC-0.67□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms