Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 AC091178.1-203ENST00000584586 279 ntBASIC3.84□□□□□ -1.79
CNTNAP3BQ96NU0 AC006023.1-201ENST00000603944 259 ntBASIC3.84□□□□□ -1.79
CNTNAP3BQ96NU0 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.84□□□□□ -1.79
CNTNAP3BQ96NU0 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CNTNAP3BQ96NU0 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CNTNAP3BQ96NU0 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
CNTNAP3BQ96NU0 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CNTNAP3BQ96NU0 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CNTNAP3BQ96NU0 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
CNTNAP3BQ96NU0 MIR449A-201ENST00000362113 91 ntBASIC3.83□□□□□ -1.8
CNTNAP3BQ96NU0 RNU4-13P-201ENST00000364019 141 ntBASIC3.83□□□□□ -1.8
CNTNAP3BQ96NU0 RNU6-219P-201ENST00000364728 107 ntBASIC3.83□□□□□ -1.8
CNTNAP3BQ96NU0 SNORD61-201ENST00000384252 73 ntBASIC3.83□□□□□ -1.8
CNTNAP3BQ96NU0 SNORD77.3-201ENST00000391113 65 ntBASIC3.83□□□□□ -1.8
CNTNAP3BQ96NU0 RNA5SP354-201ENST00000391247 136 ntBASIC3.83□□□□□ -1.8
CNTNAP3BQ96NU0 MIR1912-201ENST00000410389 80 ntBASIC3.83□□□□□ -1.8
CNTNAP3BQ96NU0 RN7SKP167-201ENST00000411047 285 ntBASIC3.83□□□□□ -1.8
CNTNAP3BQ96NU0 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.83□□□□□ -1.8
CNTNAP3BQ96NU0 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC3.83□□□□□ -1.8
CNTNAP3BQ96NU0 RNU6-162P-201ENST00000516228 103 ntBASIC3.83□□□□□ -1.8
CNTNAP3BQ96NU0 RNU6-267P-201ENST00000516714 103 ntBASIC3.83□□□□□ -1.8
CNTNAP3BQ96NU0 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC3.83□□□□□ -1.8
CNTNAP3BQ96NU0 YPEL5P2-201ENST00000605553 359 ntBASIC3.83□□□□□ -1.8
CNTNAP3BQ96NU0 RNU1-30P-201ENST00000606575 163 ntBASIC3.83□□□□□ -1.8
CNTNAP3BQ96NU0 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
CNTNAP3BQ96NU0 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
CNTNAP3BQ96NU0 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.83□□□□□ -1.8
CNTNAP3BQ96NU0 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
CNTNAP3BQ96NU0 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.83□□□□□ -1.8
CNTNAP3BQ96NU0 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CNTNAP3BQ96NU0 Z82217.1-201ENST00000625157 8149 ntBASIC3.82□□□□□ -1.8
CNTNAP3BQ96NU0 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.82□□□□□ -1.8
CNTNAP3BQ96NU0 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
CNTNAP3BQ96NU0 RNU6-888P-201ENST00000363010 101 ntBASIC3.82□□□□□ -1.8
CNTNAP3BQ96NU0 SNORA80A-201ENST00000363922 136 ntBASIC3.82□□□□□ -1.8
CNTNAP3BQ96NU0 SNORA3C-201ENST00000408792 125 ntBASIC3.82□□□□□ -1.8
CNTNAP3BQ96NU0 AL139247.1-201ENST00000422768 325 ntBASIC3.82□□□□□ -1.8
CNTNAP3BQ96NU0 RPS26P15-201ENST00000488067 348 ntBASIC3.82□□□□□ -1.8
CNTNAP3BQ96NU0 RNU6ATAC12P-201ENST00000516542 115 ntBASIC3.82□□□□□ -1.8
CNTNAP3BQ96NU0 MIR6868-201ENST00000611215 58 ntBASIC3.82□□□□□ -1.8
CNTNAP3BQ96NU0 uc_338.14-201ENST00000613162 166 ntBASIC3.82□□□□□ -1.8
CNTNAP3BQ96NU0 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CNTNAP3BQ96NU0 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CNTNAP3BQ96NU0 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CNTNAP3BQ96NU0 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
CNTNAP3BQ96NU0 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
CNTNAP3BQ96NU0 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.81□□□□□ -1.8
CNTNAP3BQ96NU0 Y_RNA.298-201ENST00000364960 107 ntBASIC3.81□□□□□ -1.8
CNTNAP3BQ96NU0 RNA5SP151-201ENST00000365632 117 ntBASIC3.81□□□□□ -1.8
CNTNAP3BQ96NU0 SNORD116-22-201ENST00000384430 92 ntBASIC3.81□□□□□ -1.8
CNTNAP3BQ96NU0 RNU6-1104P-201ENST00000384723 104 ntBASIC3.81□□□□□ -1.8
CNTNAP3BQ96NU0 MIR181A2-201ENST00000384863 110 ntBASIC3.81□□□□□ -1.8
CNTNAP3BQ96NU0 AC004941.2-201ENST00000427009 228 ntBASIC3.81□□□□□ -1.8
CNTNAP3BQ96NU0 RPL12P50-201ENST00000603116 116 ntBASIC3.81□□□□□ -1.8
CNTNAP3BQ96NU0 AC012531.4-201ENST00000616509 177 ntBASIC3.81□□□□□ -1.8
CNTNAP3BQ96NU0 FAS-AS1.2-201ENST00000620386 170 ntBASIC3.81□□□□□ -1.8
CNTNAP3BQ96NU0 MIR376A2-201ENST00000636782 80 ntBASIC3.81□□□□□ -1.8
CNTNAP3BQ96NU0 AL049781.1-201ENST00000623195 3585 ntBASIC3.81□□□□□ -1.8
CNTNAP3BQ96NU0 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CNTNAP3BQ96NU0 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.8□□□□□ -1.8
CNTNAP3BQ96NU0 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CNTNAP3BQ96NU0 RNU1-15P-201ENST00000353977 144 ntBASIC3.8□□□□□ -1.8
CNTNAP3BQ96NU0 RNU6-349P-201ENST00000362402 107 ntBASIC3.8□□□□□ -1.8
CNTNAP3BQ96NU0 SNORA33-201ENST00000363664 130 ntBASIC3.8□□□□□ -1.8
CNTNAP3BQ96NU0 SNORD24-201ENST00000383884 75 ntBASIC3.8□□□□□ -1.8
CNTNAP3BQ96NU0 RNU1-44P-201ENST00000384453 163 ntBASIC3.8□□□□□ -1.8
CNTNAP3BQ96NU0 RNU6-816P-201ENST00000390914 107 ntBASIC3.8□□□□□ -1.8
CNTNAP3BQ96NU0 RNU6-1268P-201ENST00000391214 107 ntBASIC3.8□□□□□ -1.8
CNTNAP3BQ96NU0 RNU6-1239P-201ENST00000391310 107 ntBASIC3.8□□□□□ -1.8
CNTNAP3BQ96NU0 AC005326.1-201ENST00000429197 123 ntBASIC3.8□□□□□ -1.8
CNTNAP3BQ96NU0 RPS29P19-201ENST00000479709 171 ntBASIC3.8□□□□□ -1.8
CNTNAP3BQ96NU0 AC107934.2-201ENST00000518653 310 ntBASIC3.8□□□□□ -1.8
CNTNAP3BQ96NU0 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC3.8□□□□□ -1.8
CNTNAP3BQ96NU0 MIR4325-201ENST00000583049 90 ntBASIC3.8□□□□□ -1.8
CNTNAP3BQ96NU0 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CNTNAP3BQ96NU0 AC020914.4-201ENST00000597690 277 ntBASIC3.8□□□□□ -1.8
CNTNAP3BQ96NU0 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.8□□□□□ -1.8
CNTNAP3BQ96NU0 AC091905.2-201ENST00000623143 306 ntBASIC3.8□□□□□ -1.8
CNTNAP3BQ96NU0 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
CNTNAP3BQ96NU0 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.8□□□□□ -1.8
CNTNAP3BQ96NU0 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CNTNAP3BQ96NU0 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.8□□□□□ -1.8
CNTNAP3BQ96NU0 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.8□□□□□ -1.8
CNTNAP3BQ96NU0 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.79□□□□□ -1.8
CNTNAP3BQ96NU0 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CNTNAP3BQ96NU0 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CNTNAP3BQ96NU0 Y_RNA.10-201ENST00000362371 110 ntBASIC3.79□□□□□ -1.8
CNTNAP3BQ96NU0 RNU1-72P-201ENST00000362976 153 ntBASIC3.79□□□□□ -1.8
CNTNAP3BQ96NU0 SNORD115-35-201ENST00000365122 82 ntBASIC3.79□□□□□ -1.8
CNTNAP3BQ96NU0 MIR548A2-201ENST00000384956 97 ntBASIC3.79□□□□□ -1.8
CNTNAP3BQ96NU0 RNU6-938P-201ENST00000411285 103 ntBASIC3.79□□□□□ -1.8
CNTNAP3BQ96NU0 RPS4XP11-201ENST00000446897 772 ntBASIC3.79□□□□□ -1.8
CNTNAP3BQ96NU0 AC080013.2-201ENST00000460866 323 ntBASIC3.79□□□□□ -1.8
CNTNAP3BQ96NU0 AL133162.1-201ENST00000463228 453 ntBASIC3.79□□□□□ -1.8
CNTNAP3BQ96NU0 RNU6-795P-201ENST00000516323 103 ntBASIC3.79□□□□□ -1.8
CNTNAP3BQ96NU0 RNU6-1270P-201ENST00000517128 108 ntBASIC3.79□□□□□ -1.8
CNTNAP3BQ96NU0 HSPE1P18-201ENST00000517602 280 ntBASIC3.79□□□□□ -1.8
CNTNAP3BQ96NU0 SUMO2P16-201ENST00000519475 264 ntBASIC3.79□□□□□ -1.8
CNTNAP3BQ96NU0 AC006111.3-201ENST00000622137 383 ntBASIC3.79□□□□□ -1.8
CNTNAP3BQ96NU0 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms