Protein–RNA interactions for Protein: Q96KN3

PKNOX2, Homeobox protein PKNOX2, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2Q96KN3 RNU6-165P-201ENST00000517170 99 ntBASIC0.94□□□□□ -2.26
PKNOX2Q96KN3 FRG2DP-202ENST00000566967 323 ntBASIC0.94□□□□□ -2.26
PKNOX2Q96KN3 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC0.94□□□□□ -2.26
PKNOX2Q96KN3 PIGPP4-201ENST00000584447 307 ntBASIC0.94□□□□□ -2.26
PKNOX2Q96KN3 AC016727.1-205ENST00000605437 569 ntBASIC0.94□□□□□ -2.26
PKNOX2Q96KN3 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.94□□□□□ -2.26
PKNOX2Q96KN3 AC092954.2-201ENST00000609103 430 ntBASIC0.94□□□□□ -2.26
PKNOX2Q96KN3 DLEU2_5.1-201ENST00000615567 84 ntBASIC0.94□□□□□ -2.26
PKNOX2Q96KN3 AC009248.2-201ENST00000619826 254 ntBASIC0.94□□□□□ -2.26
PKNOX2Q96KN3 SNORD114-2-201ENST00000363953 78 ntBASIC0.93□□□□□ -2.26
PKNOX2Q96KN3 RNU6-280P-201ENST00000364145 104 ntBASIC0.93□□□□□ -2.26
PKNOX2Q96KN3 RNU6-541P-201ENST00000384709 110 ntBASIC0.93□□□□□ -2.26
PKNOX2Q96KN3 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
PKNOX2Q96KN3 SNORA12.1-201ENST00000390873 148 ntBASIC0.93□□□□□ -2.26
PKNOX2Q96KN3 Y_RNA.595-201ENST00000410403 105 ntBASIC0.93□□□□□ -2.26
PKNOX2Q96KN3 MTND1P29-201ENST00000448112 647 ntBASIC0.93□□□□□ -2.26
PKNOX2Q96KN3 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.93□□□□□ -2.26
PKNOX2Q96KN3 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC0.93□□□□□ -2.26
PKNOX2Q96KN3 AC091179.3-201ENST00000474761 144 ntBASIC0.93□□□□□ -2.26
PKNOX2Q96KN3 RPL30P10-201ENST00000488148 337 ntBASIC0.93□□□□□ -2.26
PKNOX2Q96KN3 snoU13.31-201ENST00000607291 104 ntBASIC0.93□□□□□ -2.26
PKNOX2Q96KN3 AC019193.3-201ENST00000609144 554 ntBASIC0.93□□□□□ -2.26
PKNOX2Q96KN3 AL513423.1-201ENST00000621695 132 ntBASIC0.93□□□□□ -2.26
PKNOX2Q96KN3 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.93□□□□□ -2.26
PKNOX2Q96KN3 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC0.93□□□□□ -2.26
PKNOX2Q96KN3 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
PKNOX2Q96KN3 RNU6-451P-201ENST00000362921 107 ntBASIC0.92□□□□□ -2.26
PKNOX2Q96KN3 RNU6-727P-201ENST00000363592 107 ntBASIC0.92□□□□□ -2.26
PKNOX2Q96KN3 RNU5F-3P-201ENST00000363767 117 ntBASIC0.92□□□□□ -2.26
PKNOX2Q96KN3 RNY3P3-201ENST00000363816 102 ntBASIC0.92□□□□□ -2.26
PKNOX2Q96KN3 RNU6-793P-201ENST00000384233 104 ntBASIC0.92□□□□□ -2.26
PKNOX2Q96KN3 MIR200A-201ENST00000384875 90 ntBASIC0.92□□□□□ -2.26
PKNOX2Q96KN3 AL034345.1-201ENST00000407768 123 ntBASIC0.92□□□□□ -2.26
PKNOX2Q96KN3 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.92□□□□□ -2.26
PKNOX2Q96KN3 AL445305.1-201ENST00000432577 575 ntBASIC0.92□□□□□ -2.26
PKNOX2Q96KN3 MTND1P1-201ENST00000445453 368 ntBASIC0.92□□□□□ -2.26
PKNOX2Q96KN3 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.92□□□□□ -2.26
PKNOX2Q96KN3 RNU7-94P-201ENST00000459576 63 ntBASIC0.92□□□□□ -2.26
PKNOX2Q96KN3 AC092991.1-201ENST00000477176 376 ntBASIC0.92□□□□□ -2.26
PKNOX2Q96KN3 UBL5P4-201ENST00000562584 236 ntBASIC0.92□□□□□ -2.26
PKNOX2Q96KN3 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC0.92□□□□□ -2.26
PKNOX2Q96KN3 MIR5696-201ENST00000578474 85 ntBASIC0.92□□□□□ -2.26
PKNOX2Q96KN3 MIR5695-201ENST00000579717 85 ntBASIC0.92□□□□□ -2.26
PKNOX2Q96KN3 MIR3672-201ENST00000584290 82 ntBASIC0.92□□□□□ -2.26
PKNOX2Q96KN3 AL162424.1-201ENST00000602325 221 ntBASIC0.92□□□□□ -2.26
PKNOX2Q96KN3 BNIP3P10-201ENST00000605360 577 ntBASIC0.92□□□□□ -2.26
PKNOX2Q96KN3 AC124303.1-201ENST00000605703 360 ntBASIC0.92□□□□□ -2.26
PKNOX2Q96KN3 AC073349.3-201ENST00000617616 186 ntBASIC0.92□□□□□ -2.26
PKNOX2Q96KN3 Y_RNA.212-201ENST00000364177 102 ntBASIC0.91□□□□□ -2.26
PKNOX2Q96KN3 SNORD12-201ENST00000391002 90 ntBASIC0.91□□□□□ -2.26
PKNOX2Q96KN3 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.91□□□□□ -2.26
PKNOX2Q96KN3 RPL30P16-201ENST00000419341 429 ntBASIC0.91□□□□□ -2.26
PKNOX2Q96KN3 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC0.91□□□□□ -2.26
PKNOX2Q96KN3 AC093303.1-201ENST00000514549 295 ntBASIC0.91□□□□□ -2.26
PKNOX2Q96KN3 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.91□□□□□ -2.26
PKNOX2Q96KN3 RNU6-197P-201ENST00000516680 100 ntBASIC0.91□□□□□ -2.26
PKNOX2Q96KN3 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC0.91□□□□□ -2.26
PKNOX2Q96KN3 AL513534.2-201ENST00000603836 250 ntBASIC0.91□□□□□ -2.26
PKNOX2Q96KN3 SNORD3E-202ENST00000627253 216 ntBASIC0.91□□□□□ -2.26
PKNOX2Q96KN3 MIR1321-201ENST00000637766 79 ntBASIC0.91□□□□□ -2.26
PKNOX2Q96KN3 Y_RNA.38-201ENST00000362617 102 ntBASIC0.9□□□□□ -2.27
PKNOX2Q96KN3 Y_RNA.100-201ENST00000363141 102 ntBASIC0.9□□□□□ -2.27
PKNOX2Q96KN3 Y_RNA.179-201ENST00000363844 90 ntBASIC0.9□□□□□ -2.27
PKNOX2Q96KN3 Y_RNA.414-201ENST00000384011 101 ntBASIC0.9□□□□□ -2.27
PKNOX2Q96KN3 RNU6-505P-201ENST00000384427 107 ntBASIC0.9□□□□□ -2.27
PKNOX2Q96KN3 RNU6-332P-201ENST00000391193 108 ntBASIC0.9□□□□□ -2.27
PKNOX2Q96KN3 RAB28P5-201ENST00000427490 651 ntBASIC0.9□□□□□ -2.27
PKNOX2Q96KN3 MTND4P18-201ENST00000447010 465 ntBASIC0.9□□□□□ -2.27
PKNOX2Q96KN3 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC0.9□□□□□ -2.27
PKNOX2Q96KN3 PDCD5P2-201ENST00000507570 312 ntBASIC0.9□□□□□ -2.27
PKNOX2Q96KN3 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC0.9□□□□□ -2.27
PKNOX2Q96KN3 AC134698.4-201ENST00000523451 826 ntBASIC0.9□□□□□ -2.27
PKNOX2Q96KN3 APOOP3-201ENST00000536787 586 ntBASIC0.9□□□□□ -2.27
PKNOX2Q96KN3 7SK.7-201ENST00000603504 247 ntBASIC0.9□□□□□ -2.27
PKNOX2Q96KN3 AC080078.3-201ENST00000605407 463 ntBASIC0.9□□□□□ -2.27
PKNOX2Q96KN3 MIR6857-201ENST00000613267 93 ntBASIC0.9□□□□□ -2.27
PKNOX2Q96KN3 AC106800.4-201ENST00000614905 153 ntBASIC0.9□□□□□ -2.27
PKNOX2Q96KN3 AC006435.5-201ENST00000624486 112 ntBASIC0.9□□□□□ -2.27
PKNOX2Q96KN3 AC068137.4-201ENST00000638485 296 ntBASIC0.9□□□□□ -2.27
PKNOX2Q96KN3 Y_RNA.327-201ENST00000365201 102 ntBASIC0.89□□□□□ -2.27
PKNOX2Q96KN3 SNORD116-11-201ENST00000383882 92 ntBASIC0.89□□□□□ -2.27
PKNOX2Q96KN3 MIR532-201ENST00000385025 91 ntBASIC0.89□□□□□ -2.27
PKNOX2Q96KN3 MIR660-201ENST00000385235 97 ntBASIC0.89□□□□□ -2.27
PKNOX2Q96KN3 AC243428.1-201ENST00000421099 264 ntBASIC0.89□□□□□ -2.27
PKNOX2Q96KN3 MTATP6P13-201ENST00000438531 667 ntBASIC0.89□□□□□ -2.27
PKNOX2Q96KN3 SNORD65B-201ENST00000459126 73 ntBASIC0.89□□□□□ -2.27
PKNOX2Q96KN3 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.89□□□□□ -2.27
PKNOX2Q96KN3 RNU6-1053P-201ENST00000515930 101 ntBASIC0.89□□□□□ -2.27
PKNOX2Q96KN3 CBX3P8-201ENST00000532412 525 ntBASIC0.89□□□□□ -2.27
PKNOX2Q96KN3 MIR4438-201ENST00000585271 93 ntBASIC0.89□□□□□ -2.27
PKNOX2Q96KN3 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.89□□□□□ -2.27
PKNOX2Q96KN3 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC0.89□□□□□ -2.27
PKNOX2Q96KN3 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.89□□□□□ -2.27
PKNOX2Q96KN3 AC018630.2-201ENST00000534866 2403 ntBASIC0.89□□□□□ -2.27
PKNOX2Q96KN3 RNU4-76P-201ENST00000364509 141 ntBASIC0.88□□□□□ -2.27
PKNOX2Q96KN3 MIR10B-201ENST00000385011 110 ntBASIC0.88□□□□□ -2.27
PKNOX2Q96KN3 MRPS10P1-201ENST00000448483 130 ntBASIC0.88□□□□□ -2.27
PKNOX2Q96KN3 AP000870.1-201ENST00000472927 406 ntBASIC0.88□□□□□ -2.27
PKNOX2Q96KN3 RNU7-175P-201ENST00000515915 61 ntBASIC0.88□□□□□ -2.27
PKNOX2Q96KN3 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 135.3 ms