Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
CHAMP1Q96JM3 AC068700.1-201ENST00000565862 3754 ntBASIC3.14□□□□□ -1.91
CHAMP1Q96JM3 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
CHAMP1Q96JM3 RNU6-324P-201ENST00000363957 106 ntBASIC3.14□□□□□ -1.91
CHAMP1Q96JM3 SNORA25.6-201ENST00000364121 118 ntBASIC3.14□□□□□ -1.91
CHAMP1Q96JM3 RNU6-746P-201ENST00000384112 109 ntBASIC3.14□□□□□ -1.91
CHAMP1Q96JM3 MIR196B-201ENST00000384852 84 ntBASIC3.14□□□□□ -1.91
CHAMP1Q96JM3 BTF3P11-201ENST00000426582 477 ntBASIC3.14□□□□□ -1.91
CHAMP1Q96JM3 RPL30P4-201ENST00000429309 333 ntBASIC3.14□□□□□ -1.91
CHAMP1Q96JM3 AC140059.1-201ENST00000489238 361 ntBASIC3.14□□□□□ -1.91
CHAMP1Q96JM3 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CHAMP1Q96JM3 MIR449C-201ENST00000516047 92 ntBASIC3.14□□□□□ -1.91
CHAMP1Q96JM3 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC3.14□□□□□ -1.91
CHAMP1Q96JM3 AP005660.1-201ENST00000522972 293 ntBASIC3.14□□□□□ -1.91
CHAMP1Q96JM3 MIR5692C2-201ENST00000577959 77 ntBASIC3.14□□□□□ -1.91
CHAMP1Q96JM3 MIR3605-201ENST00000583214 100 ntBASIC3.14□□□□□ -1.91
CHAMP1Q96JM3 AL670379.2-201ENST00000604983 252 ntBASIC3.14□□□□□ -1.91
CHAMP1Q96JM3 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.14□□□□□ -1.91
CHAMP1Q96JM3 U6.106-201ENST00000636360 105 ntBASIC3.14□□□□□ -1.91
CHAMP1Q96JM3 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CHAMP1Q96JM3 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.14□□□□□ -1.91
CHAMP1Q96JM3 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.13□□□□□ -1.91
CHAMP1Q96JM3 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
CHAMP1Q96JM3 Y_RNA.240-201ENST00000364469 95 ntBASIC3.13□□□□□ -1.91
CHAMP1Q96JM3 Y_RNA.262-201ENST00000364641 102 ntBASIC3.13□□□□□ -1.91
CHAMP1Q96JM3 RNU6-763P-201ENST00000390865 106 ntBASIC3.13□□□□□ -1.91
CHAMP1Q96JM3 RNU1-101P-201ENST00000391171 127 ntBASIC3.13□□□□□ -1.91
CHAMP1Q96JM3 MIR1185-2-201ENST00000408687 86 ntBASIC3.13□□□□□ -1.91
CHAMP1Q96JM3 AC024067.1-201ENST00000426199 223 ntBASIC3.13□□□□□ -1.91
CHAMP1Q96JM3 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.13□□□□□ -1.91
CHAMP1Q96JM3 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.13□□□□□ -1.91
CHAMP1Q96JM3 U8.19-201ENST00000459095 133 ntBASIC3.13□□□□□ -1.91
CHAMP1Q96JM3 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.13□□□□□ -1.91
CHAMP1Q96JM3 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC3.13□□□□□ -1.91
CHAMP1Q96JM3 AL078604.3-201ENST00000615580 211 ntBASIC3.13□□□□□ -1.91
CHAMP1Q96JM3 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.13□□□□□ -1.91
CHAMP1Q96JM3 AP006437.1-201ENST00000641440 3685 ntBASIC3.13□□□□□ -1.91
CHAMP1Q96JM3 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.12□□□□□ -1.91
CHAMP1Q96JM3 RNU6-774P-201ENST00000363238 107 ntBASIC3.12□□□□□ -1.91
CHAMP1Q96JM3 Y_RNA.164-201ENST00000363709 102 ntBASIC3.12□□□□□ -1.91
CHAMP1Q96JM3 RNA5SP139-201ENST00000364340 117 ntBASIC3.12□□□□□ -1.91
CHAMP1Q96JM3 RNU6-1305P-201ENST00000364353 104 ntBASIC3.12□□□□□ -1.91
CHAMP1Q96JM3 SNORA68.1-201ENST00000364537 132 ntBASIC3.12□□□□□ -1.91
CHAMP1Q96JM3 RNU6ATAC3P-201ENST00000387974 126 ntBASIC3.12□□□□□ -1.91
CHAMP1Q96JM3 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.12□□□□□ -1.91
CHAMP1Q96JM3 AL392103.1-201ENST00000447000 198 ntBASIC3.12□□□□□ -1.91
CHAMP1Q96JM3 TRAPPC2P7-201ENST00000509650 231 ntBASIC3.12□□□□□ -1.91
CHAMP1Q96JM3 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.12□□□□□ -1.91
CHAMP1Q96JM3 HMGB3P3-201ENST00000510526 400 ntBASIC3.12□□□□□ -1.91
CHAMP1Q96JM3 RNU1-41P-201ENST00000516161 162 ntBASIC3.12□□□□□ -1.91
CHAMP1Q96JM3 SNORA9.3-201ENST00000516383 129 ntBASIC3.12□□□□□ -1.91
CHAMP1Q96JM3 RNU1-48P-201ENST00000516400 162 ntBASIC3.12□□□□□ -1.91
CHAMP1Q96JM3 RNU6-406P-201ENST00000516470 107 ntBASIC3.12□□□□□ -1.91
CHAMP1Q96JM3 RNU5F-4P-201ENST00000516581 114 ntBASIC3.12□□□□□ -1.91
CHAMP1Q96JM3 SUMO2P18-201ENST00000518873 252 ntBASIC3.12□□□□□ -1.91
CHAMP1Q96JM3 AC136628.3-201ENST00000521868 290 ntBASIC3.12□□□□□ -1.91
CHAMP1Q96JM3 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.12□□□□□ -1.91
CHAMP1Q96JM3 AC018630.3-201ENST00000542637 96 ntBASIC3.12□□□□□ -1.91
CHAMP1Q96JM3 AC090517.3-201ENST00000625170 141 ntBASIC3.12□□□□□ -1.91
CHAMP1Q96JM3 MIR7515-201ENST00000637837 67 ntBASIC3.12□□□□□ -1.91
CHAMP1Q96JM3 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.12□□□□□ -1.91
CHAMP1Q96JM3 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.11□□□□□ -1.91
CHAMP1Q96JM3 MIR26A1-201ENST00000362205 77 ntBASIC3.11□□□□□ -1.91
CHAMP1Q96JM3 SNORA26.5-201ENST00000391215 123 ntBASIC3.11□□□□□ -1.91
CHAMP1Q96JM3 U6atac.2-201ENST00000408644 118 ntBASIC3.11□□□□□ -1.91
CHAMP1Q96JM3 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.11□□□□□ -1.91
CHAMP1Q96JM3 AC108210.2-201ENST00000503681 201 ntBASIC3.11□□□□□ -1.91
CHAMP1Q96JM3 AC083906.5-201ENST00000503722 328 ntBASIC3.11□□□□□ -1.91
CHAMP1Q96JM3 ATP5EP1-201ENST00000510257 156 ntBASIC3.11□□□□□ -1.91
CHAMP1Q96JM3 RNU6-548P-201ENST00000517083 115 ntBASIC3.11□□□□□ -1.91
CHAMP1Q96JM3 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC3.11□□□□□ -1.91
CHAMP1Q96JM3 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC3.11□□□□□ -1.91
CHAMP1Q96JM3 MRPS18CP4-201ENST00000535821 231 ntBASIC3.11□□□□□ -1.91
CHAMP1Q96JM3 AC009127.3-201ENST00000570531 403 ntBASIC3.11□□□□□ -1.91
CHAMP1Q96JM3 AL590808.1-201ENST00000618696 141 ntBASIC3.11□□□□□ -1.91
CHAMP1Q96JM3 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CHAMP1Q96JM3 AC010329.5-201ENST00000623497 2174 ntBASIC3.11□□□□□ -1.91
CHAMP1Q96JM3 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CHAMP1Q96JM3 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
CHAMP1Q96JM3 MIR1283-1-201ENST00000408494 87 ntBASIC3.1□□□□□ -1.91
CHAMP1Q96JM3 MIR1294-201ENST00000408503 142 ntBASIC3.1□□□□□ -1.91
CHAMP1Q96JM3 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC3.1□□□□□ -1.91
CHAMP1Q96JM3 RNU6-1219P-201ENST00000516143 112 ntBASIC3.1□□□□□ -1.91
CHAMP1Q96JM3 AC015712.3-201ENST00000559380 164 ntBASIC3.1□□□□□ -1.91
CHAMP1Q96JM3 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC3.1□□□□□ -1.91
CHAMP1Q96JM3 AC025754.2-201ENST00000606491 432 ntBASIC3.1□□□□□ -1.91
CHAMP1Q96JM3 AC004832.5-201ENST00000608677 401 ntBASIC3.1□□□□□ -1.91
CHAMP1Q96JM3 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
CHAMP1Q96JM3 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.1□□□□□ -1.91
CHAMP1Q96JM3 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.1□□□□□ -1.91
CHAMP1Q96JM3 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3.09□□□□□ -1.91
CHAMP1Q96JM3 RNU6-234P-201ENST00000365229 104 ntBASIC3.09□□□□□ -1.91
CHAMP1Q96JM3 Y_RNA.368-201ENST00000365547 113 ntBASIC3.09□□□□□ -1.91
CHAMP1Q96JM3 RNU6-125P-201ENST00000384505 107 ntBASIC3.09□□□□□ -1.91
CHAMP1Q96JM3 RNU6-482P-201ENST00000391068 107 ntBASIC3.09□□□□□ -1.91
CHAMP1Q96JM3 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.09□□□□□ -1.91
CHAMP1Q96JM3 AC105272.1-201ENST00000438604 198 ntBASIC3.09□□□□□ -1.91
CHAMP1Q96JM3 AL109933.2-201ENST00000452651 260 ntBASIC3.09□□□□□ -1.91
CHAMP1Q96JM3 snoU13.23-201ENST00000458863 104 ntBASIC3.09□□□□□ -1.91
CHAMP1Q96JM3 RNU7-14P-201ENST00000459331 62 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 678.9 ms