Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 AC060773.1-201ENST00000421698 310 ntBASIC2.17□□□□□ -2.06
SH3KBP1Q96B97 AL357134.1-201ENST00000445848 426 ntBASIC2.17□□□□□ -2.06
SH3KBP1Q96B97 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.17□□□□□ -2.06
SH3KBP1Q96B97 RNU6-911P-201ENST00000516523 104 ntBASIC2.17□□□□□ -2.06
SH3KBP1Q96B97 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
SH3KBP1Q96B97 AC040926.1-201ENST00000530195 238 ntBASIC2.17□□□□□ -2.06
SH3KBP1Q96B97 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.17□□□□□ -2.06
SH3KBP1Q96B97 AP003072.1-201ENST00000531740 145 ntBASIC2.17□□□□□ -2.06
SH3KBP1Q96B97 MIR3169-201ENST00000578032 83 ntBASIC2.17□□□□□ -2.06
SH3KBP1Q96B97 MTND5P6-201ENST00000422338 1798 ntBASIC2.17□□□□□ -2.06
SH3KBP1Q96B97 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.16□□□□□ -2.06
SH3KBP1Q96B97 RNA5SP37-201ENST00000365420 130 ntBASIC2.16□□□□□ -2.06
SH3KBP1Q96B97 Y_RNA.389-201ENST00000383924 113 ntBASIC2.16□□□□□ -2.06
SH3KBP1Q96B97 RNU6-1227P-201ENST00000383981 107 ntBASIC2.16□□□□□ -2.06
SH3KBP1Q96B97 RNU6-1235P-201ENST00000384559 107 ntBASIC2.16□□□□□ -2.06
SH3KBP1Q96B97 SNORA48.3-201ENST00000391081 134 ntBASIC2.16□□□□□ -2.06
SH3KBP1Q96B97 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
SH3KBP1Q96B97 MIR1185-2-201ENST00000408687 86 ntBASIC2.16□□□□□ -2.06
SH3KBP1Q96B97 SNORA11.4-201ENST00000408823 129 ntBASIC2.16□□□□□ -2.06
SH3KBP1Q96B97 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.16□□□□□ -2.06
SH3KBP1Q96B97 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.16□□□□□ -2.06
SH3KBP1Q96B97 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
SH3KBP1Q96B97 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.16□□□□□ -2.06
SH3KBP1Q96B97 FCF1P4-201ENST00000448326 183 ntBASIC2.16□□□□□ -2.06
SH3KBP1Q96B97 RNU6-498P-201ENST00000459468 107 ntBASIC2.16□□□□□ -2.06
SH3KBP1Q96B97 AC067942.3-201ENST00000512025 362 ntBASIC2.16□□□□□ -2.06
SH3KBP1Q96B97 SNORA40.14-201ENST00000516543 86 ntBASIC2.16□□□□□ -2.06
SH3KBP1Q96B97 AC023442.1-201ENST00000531247 422 ntBASIC2.16□□□□□ -2.06
SH3KBP1Q96B97 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.16□□□□□ -2.06
SH3KBP1Q96B97 AC104695.3-201ENST00000604052 296 ntBASIC2.16□□□□□ -2.06
SH3KBP1Q96B97 AC124312.5-201ENST00000604451 268 ntBASIC2.16□□□□□ -2.06
SH3KBP1Q96B97 AC240442.1-201ENST00000616055 283 ntBASIC2.16□□□□□ -2.06
SH3KBP1Q96B97 AL138825.1-201ENST00000618587 192 ntBASIC2.16□□□□□ -2.06
SH3KBP1Q96B97 AP000553.5-201ENST00000641933 54 ntBASIC2.16□□□□□ -2.06
SH3KBP1Q96B97 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
SH3KBP1Q96B97 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
SH3KBP1Q96B97 Y_RNA.202-201ENST00000364083 110 ntBASIC2.15□□□□□ -2.07
SH3KBP1Q96B97 Y_RNA.527-201ENST00000384573 102 ntBASIC2.15□□□□□ -2.07
SH3KBP1Q96B97 RNU2-20P-201ENST00000410425 191 ntBASIC2.15□□□□□ -2.07
SH3KBP1Q96B97 RNA5SP475-201ENST00000410568 110 ntBASIC2.15□□□□□ -2.07
SH3KBP1Q96B97 RAB28P5-201ENST00000427490 651 ntBASIC2.15□□□□□ -2.07
SH3KBP1Q96B97 AC018634.1-201ENST00000437554 401 ntBASIC2.15□□□□□ -2.07
SH3KBP1Q96B97 MTCYBP6-201ENST00000441810 138 ntBASIC2.15□□□□□ -2.07
SH3KBP1Q96B97 AC112492.4-201ENST00000456549 352 ntBASIC2.15□□□□□ -2.07
SH3KBP1Q96B97 AC108210.2-201ENST00000503681 201 ntBASIC2.15□□□□□ -2.07
SH3KBP1Q96B97 RNU6-397P-201ENST00000516226 104 ntBASIC2.15□□□□□ -2.07
SH3KBP1Q96B97 RNU6-1012P-201ENST00000516606 109 ntBASIC2.15□□□□□ -2.07
SH3KBP1Q96B97 CYCSP23-201ENST00000519781 313 ntBASIC2.15□□□□□ -2.07
SH3KBP1Q96B97 AP002001.1-203ENST00000534002 267 ntBASIC2.15□□□□□ -2.07
SH3KBP1Q96B97 GNAI2P1-201ENST00000541815 315 ntBASIC2.15□□□□□ -2.07
SH3KBP1Q96B97 MIR4448-201ENST00000584360 86 ntBASIC2.15□□□□□ -2.07
SH3KBP1Q96B97 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.15□□□□□ -2.07
SH3KBP1Q96B97 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.15□□□□□ -2.07
SH3KBP1Q96B97 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC2.15□□□□□ -2.07
SH3KBP1Q96B97 AC009831.4-201ENST00000620744 325 ntBASIC2.15□□□□□ -2.07
SH3KBP1Q96B97 MIR219B-201ENST00000637023 88 ntBASIC2.15□□□□□ -2.07
SH3KBP1Q96B97 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
SH3KBP1Q96B97 Y_RNA.471-201ENST00000384312 102 ntBASIC2.14□□□□□ -2.07
SH3KBP1Q96B97 SNORA8-201ENST00000384574 139 ntBASIC2.14□□□□□ -2.07
SH3KBP1Q96B97 RNU6-1011P-201ENST00000384668 107 ntBASIC2.14□□□□□ -2.07
SH3KBP1Q96B97 MIR1253-201ENST00000408273 105 ntBASIC2.14□□□□□ -2.07
SH3KBP1Q96B97 AL591806.2-201ENST00000433122 173 ntBASIC2.14□□□□□ -2.07
SH3KBP1Q96B97 HMGN2P34-201ENST00000437647 269 ntBASIC2.14□□□□□ -2.07
SH3KBP1Q96B97 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.14□□□□□ -2.07
SH3KBP1Q96B97 RPL23AP42-201ENST00000471152 471 ntBASIC2.14□□□□□ -2.07
SH3KBP1Q96B97 AC011406.1-201ENST00000512440 370 ntBASIC2.14□□□□□ -2.07
SH3KBP1Q96B97 AC074133.1-201ENST00000515696 183 ntBASIC2.14□□□□□ -2.07
SH3KBP1Q96B97 RNU6-856P-201ENST00000516959 98 ntBASIC2.14□□□□□ -2.07
SH3KBP1Q96B97 AC055872.1-201ENST00000570978 278 ntBASIC2.14□□□□□ -2.07
SH3KBP1Q96B97 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.14□□□□□ -2.07
SH3KBP1Q96B97 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.14□□□□□ -2.07
SH3KBP1Q96B97 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.14□□□□□ -2.07
SH3KBP1Q96B97 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.14□□□□□ -2.07
SH3KBP1Q96B97 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
SH3KBP1Q96B97 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
SH3KBP1Q96B97 RNU6-862P-201ENST00000362804 105 ntBASIC2.13□□□□□ -2.07
SH3KBP1Q96B97 RNU6-626P-201ENST00000363354 107 ntBASIC2.13□□□□□ -2.07
SH3KBP1Q96B97 RNA5SP99-201ENST00000364020 114 ntBASIC2.13□□□□□ -2.07
SH3KBP1Q96B97 RNU6-20P-201ENST00000384106 107 ntBASIC2.13□□□□□ -2.07
SH3KBP1Q96B97 Y_RNA.458-201ENST00000384240 102 ntBASIC2.13□□□□□ -2.07
SH3KBP1Q96B97 RNU6-417P-201ENST00000384712 107 ntBASIC2.13□□□□□ -2.07
SH3KBP1Q96B97 MIR764-201ENST00000390811 85 ntBASIC2.13□□□□□ -2.07
SH3KBP1Q96B97 RNU6-101P-201ENST00000410323 104 ntBASIC2.13□□□□□ -2.07
SH3KBP1Q96B97 RNU2-40P-201ENST00000410833 196 ntBASIC2.13□□□□□ -2.07
SH3KBP1Q96B97 RNA5SP489-201ENST00000410986 109 ntBASIC2.13□□□□□ -2.07
SH3KBP1Q96B97 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.13□□□□□ -2.07
SH3KBP1Q96B97 NDUFB4P10-201ENST00000452541 359 ntBASIC2.13□□□□□ -2.07
SH3KBP1Q96B97 snoU13.23-201ENST00000458863 104 ntBASIC2.13□□□□□ -2.07
SH3KBP1Q96B97 SCARNA16.3-201ENST00000516595 184 ntBASIC2.13□□□□□ -2.07
SH3KBP1Q96B97 RNU6-1137P-201ENST00000517073 99 ntBASIC2.13□□□□□ -2.07
SH3KBP1Q96B97 AC025647.1-201ENST00000517879 253 ntBASIC2.13□□□□□ -2.07
SH3KBP1Q96B97 SUMO2P18-201ENST00000518873 252 ntBASIC2.13□□□□□ -2.07
SH3KBP1Q96B97 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.13□□□□□ -2.07
SH3KBP1Q96B97 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.13□□□□□ -2.07
SH3KBP1Q96B97 AC002984.1-201ENST00000591692 448 ntBASIC2.13□□□□□ -2.07
SH3KBP1Q96B97 AL390123.1-201ENST00000603216 237 ntBASIC2.13□□□□□ -2.07
SH3KBP1Q96B97 AC004467.1-201ENST00000615678 330 ntBASIC2.13□□□□□ -2.07
SH3KBP1Q96B97 MIR3674-201ENST00000636576 68 ntBASIC2.13□□□□□ -2.07
SH3KBP1Q96B97 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.12□□□□□ -2.07
SH3KBP1Q96B97 SNORA72.2-201ENST00000365028 127 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 171.3 ms