Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 SNORA11.4-201ENST00000408823 129 ntBASIC2.15□□□□□ -2.07
NPIPB3Q92617 RNU2-61P-201ENST00000411069 191 ntBASIC2.15□□□□□ -2.07
NPIPB3Q92617 SNORD127-201ENST00000458892 86 ntBASIC2.15□□□□□ -2.07
NPIPB3Q92617 SNORA74D-201ENST00000516404 141 ntBASIC2.15□□□□□ -2.07
NPIPB3Q92617 SNORA31.25-201ENST00000517242 134 ntBASIC2.15□□□□□ -2.07
NPIPB3Q92617 AC023157.2-201ENST00000540596 141 ntBASIC2.15□□□□□ -2.07
NPIPB3Q92617 MIR4438-201ENST00000585271 93 ntBASIC2.15□□□□□ -2.07
NPIPB3Q92617 RPL12P50-201ENST00000603116 116 ntBASIC2.15□□□□□ -2.07
NPIPB3Q92617 ZNF271P-202ENST00000465539 1970 ntBASIC2.15□□□□□ -2.07
NPIPB3Q92617 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.15□□□□□ -2.07
NPIPB3Q92617 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.15□□□□□ -2.07
NPIPB3Q92617 AC245060.5-201ENST00000610778 3293 ntBASIC2.14□□□□□ -2.07
NPIPB3Q92617 RNU4-80P-201ENST00000363200 141 ntBASIC2.14□□□□□ -2.07
NPIPB3Q92617 Y_RNA.124-201ENST00000363339 93 ntBASIC2.14□□□□□ -2.07
NPIPB3Q92617 RNA5SP393-201ENST00000363423 117 ntBASIC2.14□□□□□ -2.07
NPIPB3Q92617 Y_RNA.287-201ENST00000364853 94 ntBASIC2.14□□□□□ -2.07
NPIPB3Q92617 MIR597-201ENST00000384968 97 ntBASIC2.14□□□□□ -2.07
NPIPB3Q92617 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.14□□□□□ -2.07
NPIPB3Q92617 CST2P1-201ENST00000425770 87 ntBASIC2.14□□□□□ -2.07
NPIPB3Q92617 MTCO1P5-201ENST00000433573 344 ntBASIC2.14□□□□□ -2.07
NPIPB3Q92617 HSPE1P13-201ENST00000451143 297 ntBASIC2.14□□□□□ -2.07
NPIPB3Q92617 RNU6-1132P-201ENST00000459214 107 ntBASIC2.14□□□□□ -2.07
NPIPB3Q92617 SCARNA24.2-201ENST00000516968 130 ntBASIC2.14□□□□□ -2.07
NPIPB3Q92617 AC009127.3-201ENST00000570531 403 ntBASIC2.14□□□□□ -2.07
NPIPB3Q92617 MIR3145-201ENST00000580727 82 ntBASIC2.14□□□□□ -2.07
NPIPB3Q92617 MIR4444-1-201ENST00000581696 74 ntBASIC2.14□□□□□ -2.07
NPIPB3Q92617 MIR4444-2-201ENST00000584390 74 ntBASIC2.14□□□□□ -2.07
NPIPB3Q92617 AL512605.2-201ENST00000592972 256 ntBASIC2.14□□□□□ -2.07
NPIPB3Q92617 AC078899.2-201ENST00000595282 212 ntBASIC2.14□□□□□ -2.07
NPIPB3Q92617 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.14□□□□□ -2.07
NPIPB3Q92617 MIR6075-201ENST00000620782 95 ntBASIC2.14□□□□□ -2.07
NPIPB3Q92617 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
NPIPB3Q92617 SNORA48.5-201ENST00000391143 135 ntBASIC2.13□□□□□ -2.07
NPIPB3Q92617 AL117342.1-201ENST00000404861 406 ntBASIC2.13□□□□□ -2.07
NPIPB3Q92617 RNU2-38P-201ENST00000410856 79 ntBASIC2.13□□□□□ -2.07
NPIPB3Q92617 Y_RNA.618-201ENST00000410949 107 ntBASIC2.13□□□□□ -2.07
NPIPB3Q92617 HMGN2P3-201ENST00000433603 273 ntBASIC2.13□□□□□ -2.07
NPIPB3Q92617 HMGN2P5-201ENST00000436882 273 ntBASIC2.13□□□□□ -2.07
NPIPB3Q92617 AC018634.1-201ENST00000437554 401 ntBASIC2.13□□□□□ -2.07
NPIPB3Q92617 RPL39P38-201ENST00000467018 153 ntBASIC2.13□□□□□ -2.07
NPIPB3Q92617 RPL7P49-201ENST00000471402 708 ntBASIC2.13□□□□□ -2.07
NPIPB3Q92617 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.13□□□□□ -2.07
NPIPB3Q92617 RN7SKP57-201ENST00000517248 293 ntBASIC2.13□□□□□ -2.07
NPIPB3Q92617 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.13□□□□□ -2.07
NPIPB3Q92617 MIR4429-201ENST00000580105 73 ntBASIC2.13□□□□□ -2.07
NPIPB3Q92617 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
NPIPB3Q92617 AC007229.1-201ENST00000590455 412 ntBASIC2.13□□□□□ -2.07
NPIPB3Q92617 AL359075.3-201ENST00000613288 217 ntBASIC2.13□□□□□ -2.07
NPIPB3Q92617 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.13□□□□□ -2.07
NPIPB3Q92617 U6.73-201ENST00000619194 103 ntBASIC2.13□□□□□ -2.07
NPIPB3Q92617 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.13□□□□□ -2.07
NPIPB3Q92617 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.12□□□□□ -2.07
NPIPB3Q92617 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
NPIPB3Q92617 Y_RNA.14-201ENST00000362415 103 ntBASIC2.12□□□□□ -2.07
NPIPB3Q92617 RNU6-862P-201ENST00000362804 105 ntBASIC2.12□□□□□ -2.07
NPIPB3Q92617 RNU1-96P-201ENST00000364163 162 ntBASIC2.12□□□□□ -2.07
NPIPB3Q92617 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
NPIPB3Q92617 MIR548H3-201ENST00000408771 118 ntBASIC2.12□□□□□ -2.07
NPIPB3Q92617 RNU6-855P-201ENST00000410395 104 ntBASIC2.12□□□□□ -2.07
NPIPB3Q92617 EEF1A1P41-201ENST00000414667 207 ntBASIC2.12□□□□□ -2.07
NPIPB3Q92617 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.12□□□□□ -2.07
NPIPB3Q92617 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.12□□□□□ -2.07
NPIPB3Q92617 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.12□□□□□ -2.07
NPIPB3Q92617 AC010409.1-201ENST00000487382 476 ntBASIC2.12□□□□□ -2.07
NPIPB3Q92617 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.12□□□□□ -2.07
NPIPB3Q92617 AC097462.1-201ENST00000514125 324 ntBASIC2.12□□□□□ -2.07
NPIPB3Q92617 RNU6-1278P-201ENST00000516130 107 ntBASIC2.12□□□□□ -2.07
NPIPB3Q92617 RNU6-191P-201ENST00000516295 94 ntBASIC2.12□□□□□ -2.07
NPIPB3Q92617 AC004486.1-201ENST00000546846 233 ntBASIC2.12□□□□□ -2.07
NPIPB3Q92617 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.12□□□□□ -2.07
NPIPB3Q92617 MIR4446-201ENST00000578505 67 ntBASIC2.12□□□□□ -2.07
NPIPB3Q92617 AC006023.1-201ENST00000603944 259 ntBASIC2.12□□□□□ -2.07
NPIPB3Q92617 U2.14-201ENST00000615943 113 ntBASIC2.12□□□□□ -2.07
NPIPB3Q92617 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.12□□□□□ -2.07
NPIPB3Q92617 AC007336.1-201ENST00000576365 3828 ntBASIC2.11□□□□□ -2.07
NPIPB3Q92617 RNU1-22P-201ENST00000363334 158 ntBASIC2.11□□□□□ -2.07
NPIPB3Q92617 Y_RNA.350-201ENST00000365409 98 ntBASIC2.11□□□□□ -2.07
NPIPB3Q92617 Y_RNA.562-201ENST00000384695 113 ntBASIC2.11□□□□□ -2.07
NPIPB3Q92617 RNA5SP323-201ENST00000391094 133 ntBASIC2.11□□□□□ -2.07
NPIPB3Q92617 RNU11-5P-201ENST00000391216 129 ntBASIC2.11□□□□□ -2.07
NPIPB3Q92617 SNORD23.1-201ENST00000408212 104 ntBASIC2.11□□□□□ -2.07
NPIPB3Q92617 RPS15AP28-201ENST00000435088 386 ntBASIC2.11□□□□□ -2.07
NPIPB3Q92617 AC091959.1-201ENST00000495857 238 ntBASIC2.11□□□□□ -2.07
NPIPB3Q92617 RNA5SP341-201ENST00000516261 117 ntBASIC2.11□□□□□ -2.07
NPIPB3Q92617 RNU6-1337P-201ENST00000516525 95 ntBASIC2.11□□□□□ -2.07
NPIPB3Q92617 RNU1-142P-201ENST00000516682 145 ntBASIC2.11□□□□□ -2.07
NPIPB3Q92617 AC024995.1-201ENST00000523014 93 ntBASIC2.11□□□□□ -2.07
NPIPB3Q92617 AC012433.1-201ENST00000588916 398 ntBASIC2.11□□□□□ -2.07
NPIPB3Q92617 AL162274.2-201ENST00000614406 332 ntBASIC2.11□□□□□ -2.07
NPIPB3Q92617 AC022513.1-201ENST00000624512 117 ntBASIC2.11□□□□□ -2.07
NPIPB3Q92617 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
NPIPB3Q92617 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
NPIPB3Q92617 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.1□□□□□ -2.07
NPIPB3Q92617 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
NPIPB3Q92617 Y_RNA.44-201ENST00000362676 108 ntBASIC2.1□□□□□ -2.07
NPIPB3Q92617 RNU6-525P-201ENST00000363685 104 ntBASIC2.1□□□□□ -2.07
NPIPB3Q92617 RNU1-51P-201ENST00000365345 176 ntBASIC2.1□□□□□ -2.07
NPIPB3Q92617 Y_RNA.352-201ENST00000365439 102 ntBASIC2.1□□□□□ -2.07
NPIPB3Q92617 RNA5SP210-201ENST00000391034 120 ntBASIC2.1□□□□□ -2.07
NPIPB3Q92617 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms