Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
BEST4Q8NFU0 U3.8-201ENST00000363675 217 ntBASIC1.48□□□□□ -2.17
BEST4Q8NFU0 MIR628-201ENST00000385229 95 ntBASIC1.48□□□□□ -2.17
BEST4Q8NFU0 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
BEST4Q8NFU0 RNA5SP425-201ENST00000410336 112 ntBASIC1.48□□□□□ -2.17
BEST4Q8NFU0 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.48□□□□□ -2.17
BEST4Q8NFU0 DPH3P2-201ENST00000422618 250 ntBASIC1.48□□□□□ -2.17
BEST4Q8NFU0 RAB28P5-201ENST00000427490 651 ntBASIC1.48□□□□□ -2.17
BEST4Q8NFU0 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.48□□□□□ -2.17
BEST4Q8NFU0 HSBP1P1-201ENST00000555205 166 ntBASIC1.48□□□□□ -2.17
BEST4Q8NFU0 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.48□□□□□ -2.17
BEST4Q8NFU0 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.48□□□□□ -2.17
BEST4Q8NFU0 AL008636.1-201ENST00000625038 1018 ntBASIC1.48□□□□□ -2.17
BEST4Q8NFU0 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.48□□□□□ -2.17
BEST4Q8NFU0 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.48□□□□□ -2.17
BEST4Q8NFU0 AC091812.1-201ENST00000432235 1948 ntBASIC1.47□□□□□ -2.17
BEST4Q8NFU0 Y_RNA.124-201ENST00000363339 93 ntBASIC1.47□□□□□ -2.17
BEST4Q8NFU0 Y_RNA.138-201ENST00000363462 102 ntBASIC1.47□□□□□ -2.17
BEST4Q8NFU0 Y_RNA.216-201ENST00000364205 93 ntBASIC1.47□□□□□ -2.17
BEST4Q8NFU0 RNU6-1240P-201ENST00000365155 104 ntBASIC1.47□□□□□ -2.17
BEST4Q8NFU0 Y_RNA.428-201ENST00000384078 102 ntBASIC1.47□□□□□ -2.17
BEST4Q8NFU0 RNU6-296P-201ENST00000384608 107 ntBASIC1.47□□□□□ -2.17
BEST4Q8NFU0 RNU6-136P-201ENST00000384663 107 ntBASIC1.47□□□□□ -2.17
BEST4Q8NFU0 MT-TD-201ENST00000387419 68 ntBASIC1.47□□□□□ -2.17
BEST4Q8NFU0 RNA5SP323-201ENST00000391094 133 ntBASIC1.47□□□□□ -2.17
BEST4Q8NFU0 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
BEST4Q8NFU0 AC019129.1-201ENST00000403786 261 ntBASIC1.47□□□□□ -2.17
BEST4Q8NFU0 AL355796.1-201ENST00000406706 323 ntBASIC1.47□□□□□ -2.17
BEST4Q8NFU0 RNU2-7P-201ENST00000410794 178 ntBASIC1.47□□□□□ -2.17
BEST4Q8NFU0 Z98742.3-201ENST00000418637 326 ntBASIC1.47□□□□□ -2.17
BEST4Q8NFU0 AC010154.1-201ENST00000425857 269 ntBASIC1.47□□□□□ -2.17
BEST4Q8NFU0 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.47□□□□□ -2.17
BEST4Q8NFU0 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.47□□□□□ -2.17
BEST4Q8NFU0 AC074290.1-201ENST00000448883 135 ntBASIC1.47□□□□□ -2.17
BEST4Q8NFU0 SNORD65B-201ENST00000459126 73 ntBASIC1.47□□□□□ -2.17
BEST4Q8NFU0 AC005908.1-201ENST00000468701 347 ntBASIC1.47□□□□□ -2.17
BEST4Q8NFU0 AL163195.1-201ENST00000496941 348 ntBASIC1.47□□□□□ -2.17
BEST4Q8NFU0 RN7SKP49-201ENST00000516675 260 ntBASIC1.47□□□□□ -2.17
BEST4Q8NFU0 RNU4-77P-201ENST00000516692 156 ntBASIC1.47□□□□□ -2.17
BEST4Q8NFU0 SNORD116.3-201ENST00000517176 78 ntBASIC1.47□□□□□ -2.17
BEST4Q8NFU0 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.47□□□□□ -2.17
BEST4Q8NFU0 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.47□□□□□ -2.17
BEST4Q8NFU0 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.47□□□□□ -2.17
BEST4Q8NFU0 AL080274.1-201ENST00000605565 220 ntBASIC1.47□□□□□ -2.17
BEST4Q8NFU0 SNORD58B-201ENST00000607313 66 ntBASIC1.47□□□□□ -2.17
BEST4Q8NFU0 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.47□□□□□ -2.17
BEST4Q8NFU0 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.47□□□□□ -2.17
BEST4Q8NFU0 AC095038.3-201ENST00000634439 195 ntBASIC1.47□□□□□ -2.17
BEST4Q8NFU0 U6.92-201ENST00000636464 89 ntBASIC1.47□□□□□ -2.17
BEST4Q8NFU0 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.46□□□□□ -2.17
BEST4Q8NFU0 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
BEST4Q8NFU0 RNU6-407P-201ENST00000365280 104 ntBASIC1.46□□□□□ -2.18
BEST4Q8NFU0 RNY1P14-201ENST00000384426 108 ntBASIC1.46□□□□□ -2.18
BEST4Q8NFU0 RN7SKP223-201ENST00000410582 62 ntBASIC1.46□□□□□ -2.18
BEST4Q8NFU0 HSPE1P9-201ENST00000440046 311 ntBASIC1.46□□□□□ -2.18
BEST4Q8NFU0 RPS27P22-201ENST00000478056 241 ntBASIC1.46□□□□□ -2.18
BEST4Q8NFU0 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.46□□□□□ -2.18
BEST4Q8NFU0 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.46□□□□□ -2.18
BEST4Q8NFU0 RNU6-1153P-201ENST00000516760 105 ntBASIC1.46□□□□□ -2.18
BEST4Q8NFU0 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.46□□□□□ -2.18
BEST4Q8NFU0 CBX3P4-201ENST00000538909 354 ntBASIC1.46□□□□□ -2.18
BEST4Q8NFU0 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.46□□□□□ -2.18
BEST4Q8NFU0 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.46□□□□□ -2.18
BEST4Q8NFU0 AC069114.2-201ENST00000604699 304 ntBASIC1.46□□□□□ -2.18
BEST4Q8NFU0 U1.36-201ENST00000620684 176 ntBASIC1.46□□□□□ -2.18
BEST4Q8NFU0 MIR4272-201ENST00000635924 64 ntBASIC1.46□□□□□ -2.18
BEST4Q8NFU0 U6.108-201ENST00000637764 58 ntBASIC1.46□□□□□ -2.18
BEST4Q8NFU0 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
BEST4Q8NFU0 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
BEST4Q8NFU0 AC010615.1-201ENST00000594254 1764 ntBASIC1.45□□□□□ -2.18
BEST4Q8NFU0 Y_RNA.61-201ENST00000362835 102 ntBASIC1.45□□□□□ -2.18
BEST4Q8NFU0 Y_RNA.101-201ENST00000363154 102 ntBASIC1.45□□□□□ -2.18
BEST4Q8NFU0 SNORA20B-201ENST00000384220 132 ntBASIC1.45□□□□□ -2.18
BEST4Q8NFU0 AC003989.2-201ENST00000440224 169 ntBASIC1.45□□□□□ -2.18
BEST4Q8NFU0 RNU2-34P-201ENST00000516534 121 ntBASIC1.45□□□□□ -2.18
BEST4Q8NFU0 RNU6-63P-201ENST00000516690 95 ntBASIC1.45□□□□□ -2.18
BEST4Q8NFU0 RNU7-4P-201ENST00000516961 62 ntBASIC1.45□□□□□ -2.18
BEST4Q8NFU0 AC144568.1-201ENST00000520139 137 ntBASIC1.45□□□□□ -2.18
BEST4Q8NFU0 MIR4659A-201ENST00000580269 81 ntBASIC1.45□□□□□ -2.18
BEST4Q8NFU0 MIR5188-201ENST00000583467 113 ntBASIC1.45□□□□□ -2.18
BEST4Q8NFU0 AC004467.1-201ENST00000615678 330 ntBASIC1.45□□□□□ -2.18
BEST4Q8NFU0 IGHVIII-44-202ENST00000636235 289 ntBASIC1.45□□□□□ -2.18
BEST4Q8NFU0 RNU4-82P-201ENST00000362443 140 ntBASIC1.44□□□□□ -2.18
BEST4Q8NFU0 Y_RNA.197-201ENST00000364004 102 ntBASIC1.44□□□□□ -2.18
BEST4Q8NFU0 RNU6-450P-201ENST00000364654 107 ntBASIC1.44□□□□□ -2.18
BEST4Q8NFU0 RNU6-474P-201ENST00000384243 107 ntBASIC1.44□□□□□ -2.18
BEST4Q8NFU0 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.44□□□□□ -2.18
BEST4Q8NFU0 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.44□□□□□ -2.18
BEST4Q8NFU0 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.44□□□□□ -2.18
BEST4Q8NFU0 UBE2V1P7-201ENST00000446395 340 ntBASIC1.44□□□□□ -2.18
BEST4Q8NFU0 HMGN2P23-201ENST00000456759 269 ntBASIC1.44□□□□□ -2.18
BEST4Q8NFU0 RPS29P11-201ENST00000496507 171 ntBASIC1.44□□□□□ -2.18
BEST4Q8NFU0 RNU7-128P-201ENST00000517247 62 ntBASIC1.44□□□□□ -2.18
BEST4Q8NFU0 AL442163.3-201ENST00000554110 156 ntBASIC1.44□□□□□ -2.18
BEST4Q8NFU0 AC022254.1-201ENST00000567857 235 ntBASIC1.44□□□□□ -2.18
BEST4Q8NFU0 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.44□□□□□ -2.18
BEST4Q8NFU0 AC103810.8-201ENST00000607347 118 ntBASIC1.44□□□□□ -2.18
BEST4Q8NFU0 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.44□□□□□ -2.18
BEST4Q8NFU0 uc_338.22-201ENST00000622722 187 ntBASIC1.44□□□□□ -2.18
BEST4Q8NFU0 MIR3674-201ENST00000636576 68 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 148.2 ms