Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 RNA5SP213-201ENST00000391031 106 ntBASIC1.52□□□□□ -2.17
CCDC89Q8N998 MIR1323-201ENST00000408090 73 ntBASIC1.52□□□□□ -2.17
CCDC89Q8N998 RNU6-718P-201ENST00000516166 105 ntBASIC1.52□□□□□ -2.17
CCDC89Q8N998 RNU6-1016P-201ENST00000516689 94 ntBASIC1.52□□□□□ -2.17
CCDC89Q8N998 AC023157.2-201ENST00000540596 141 ntBASIC1.52□□□□□ -2.17
CCDC89Q8N998 SNORA28-201ENST00000606769 126 ntBASIC1.52□□□□□ -2.17
CCDC89Q8N998 AC002553.4-201ENST00000616896 331 ntBASIC1.52□□□□□ -2.17
CCDC89Q8N998 SNORD3E-202ENST00000627253 216 ntBASIC1.52□□□□□ -2.17
CCDC89Q8N998 RNA5SP327-201ENST00000362494 101 ntBASIC1.51□□□□□ -2.17
CCDC89Q8N998 Y_RNA.364-201ENST00000365532 101 ntBASIC1.51□□□□□ -2.17
CCDC89Q8N998 RNU6-939P-201ENST00000384634 107 ntBASIC1.51□□□□□ -2.17
CCDC89Q8N998 MIR618-201ENST00000385287 98 ntBASIC1.51□□□□□ -2.17
CCDC89Q8N998 SNORA67.6-201ENST00000391093 99 ntBASIC1.51□□□□□ -2.17
CCDC89Q8N998 MTCYBP4-201ENST00000401524 249 ntBASIC1.51□□□□□ -2.17
CCDC89Q8N998 MIR548F1-201ENST00000408667 84 ntBASIC1.51□□□□□ -2.17
CCDC89Q8N998 AC074085.1-201ENST00000413598 418 ntBASIC1.51□□□□□ -2.17
CCDC89Q8N998 MTCO3P19-201ENST00000415864 321 ntBASIC1.51□□□□□ -2.17
CCDC89Q8N998 AC007677.1-201ENST00000445757 515 ntBASIC1.51□□□□□ -2.17
CCDC89Q8N998 UBE2V1P7-201ENST00000446395 340 ntBASIC1.51□□□□□ -2.17
CCDC89Q8N998 AC026782.1-201ENST00000512952 449 ntBASIC1.51□□□□□ -2.17
CCDC89Q8N998 RPL21P9-201ENST00000556149 474 ntBASIC1.51□□□□□ -2.17
CCDC89Q8N998 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.51□□□□□ -2.17
CCDC89Q8N998 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.51□□□□□ -2.17
CCDC89Q8N998 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.5□□□□□ -2.17
CCDC89Q8N998 Y_RNA.2-201ENST00000362330 96 ntBASIC1.5□□□□□ -2.17
CCDC89Q8N998 Y_RNA.86-201ENST00000363020 111 ntBASIC1.5□□□□□ -2.17
CCDC89Q8N998 RNA5SP190-201ENST00000365222 118 ntBASIC1.5□□□□□ -2.17
CCDC89Q8N998 RNU6-1264P-201ENST00000383891 107 ntBASIC1.5□□□□□ -2.17
CCDC89Q8N998 AL354695.1-201ENST00000427935 228 ntBASIC1.5□□□□□ -2.17
CCDC89Q8N998 EIF1P2-201ENST00000428233 350 ntBASIC1.5□□□□□ -2.17
CCDC89Q8N998 UQCRBP2-201ENST00000447827 297 ntBASIC1.5□□□□□ -2.17
CCDC89Q8N998 SNORA31.24-201ENST00000517232 57 ntBASIC1.5□□□□□ -2.17
CCDC89Q8N998 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.5□□□□□ -2.17
CCDC89Q8N998 AC073413.2-201ENST00000604332 360 ntBASIC1.5□□□□□ -2.17
CCDC89Q8N998 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
CCDC89Q8N998 MIR562-201ENST00000384894 95 ntBASIC1.49□□□□□ -2.17
CCDC89Q8N998 MIR329-1-201ENST00000385028 80 ntBASIC1.49□□□□□ -2.17
CCDC89Q8N998 RNU6-1050P-201ENST00000410388 107 ntBASIC1.49□□□□□ -2.17
CCDC89Q8N998 RNU6-1001P-201ENST00000411265 100 ntBASIC1.49□□□□□ -2.17
CCDC89Q8N998 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.49□□□□□ -2.17
CCDC89Q8N998 MTCYBP10-201ENST00000424905 650 ntBASIC1.49□□□□□ -2.17
CCDC89Q8N998 RNU7-172P-201ENST00000517125 64 ntBASIC1.49□□□□□ -2.17
CCDC89Q8N998 AF235103.2-201ENST00000525753 346 ntBASIC1.49□□□□□ -2.17
CCDC89Q8N998 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.49□□□□□ -2.17
CCDC89Q8N998 AC008269.2-201ENST00000561915 1105 ntBASIC1.49□□□□□ -2.17
CCDC89Q8N998 BNIP3P10-201ENST00000605360 577 ntBASIC1.49□□□□□ -2.17
CCDC89Q8N998 AC005014.2-201ENST00000607795 599 ntBASIC1.49□□□□□ -2.17
CCDC89Q8N998 MIR548K-201ENST00000408406 116 ntBASIC1.48□□□□□ -2.17
CCDC89Q8N998 SNRPGP13-201ENST00000442212 177 ntBASIC1.48□□□□□ -2.17
CCDC89Q8N998 RNU7-87P-201ENST00000459343 62 ntBASIC1.48□□□□□ -2.17
CCDC89Q8N998 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.48□□□□□ -2.17
CCDC89Q8N998 AC097462.1-201ENST00000514125 324 ntBASIC1.48□□□□□ -2.17
CCDC89Q8N998 AC074133.1-201ENST00000515696 183 ntBASIC1.48□□□□□ -2.17
CCDC89Q8N998 AP000889.1-201ENST00000530968 660 ntBASIC1.48□□□□□ -2.17
CCDC89Q8N998 AC015720.1-201ENST00000565251 277 ntBASIC1.48□□□□□ -2.17
CCDC89Q8N998 AL513534.2-201ENST00000603836 250 ntBASIC1.48□□□□□ -2.17
CCDC89Q8N998 MIR7974-201ENST00000615835 79 ntBASIC1.48□□□□□ -2.17
CCDC89Q8N998 MIR6079-201ENST00000635807 62 ntBASIC1.48□□□□□ -2.17
CCDC89Q8N998 U8.1-201ENST00000362843 134 ntBASIC1.47□□□□□ -2.17
CCDC89Q8N998 RNY1P16-201ENST00000363063 111 ntBASIC1.47□□□□□ -2.17
CCDC89Q8N998 SNORA20B-201ENST00000384220 132 ntBASIC1.47□□□□□ -2.17
CCDC89Q8N998 RNU6-1145P-201ENST00000384246 107 ntBASIC1.47□□□□□ -2.17
CCDC89Q8N998 MIR660-201ENST00000385235 97 ntBASIC1.47□□□□□ -2.17
CCDC89Q8N998 Y_RNA.594-201ENST00000410373 140 ntBASIC1.47□□□□□ -2.17
CCDC89Q8N998 RPL37P10-201ENST00000412884 288 ntBASIC1.47□□□□□ -2.17
CCDC89Q8N998 MTND3P8-201ENST00000412909 339 ntBASIC1.47□□□□□ -2.17
CCDC89Q8N998 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.47□□□□□ -2.17
CCDC89Q8N998 CYCSP49-201ENST00000420810 319 ntBASIC1.47□□□□□ -2.17
CCDC89Q8N998 STAG3L5P-204ENST00000443759 179 ntBASIC1.47□□□□□ -2.17
CCDC89Q8N998 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.47□□□□□ -2.17
CCDC89Q8N998 snoU13.15-201ENST00000459407 104 ntBASIC1.47□□□□□ -2.17
CCDC89Q8N998 AC011352.1-201ENST00000512300 793 ntBASIC1.47□□□□□ -2.17
CCDC89Q8N998 Y_RNA.655-201ENST00000515919 96 ntBASIC1.47□□□□□ -2.17
CCDC89Q8N998 RNA5SP61-201ENST00000516453 100 ntBASIC1.47□□□□□ -2.17
CCDC89Q8N998 Y_RNA.708-201ENST00000516950 96 ntBASIC1.47□□□□□ -2.17
CCDC89Q8N998 AC105029.1-201ENST00000520250 669 ntBASIC1.47□□□□□ -2.17
CCDC89Q8N998 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.47□□□□□ -2.17
CCDC89Q8N998 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.47□□□□□ -2.17
CCDC89Q8N998 AC125232.2-201ENST00000592457 143 ntBASIC1.47□□□□□ -2.17
CCDC89Q8N998 AC104260.1-201ENST00000616660 539 ntBASIC1.47□□□□□ -2.17
CCDC89Q8N998 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.47□□□□□ -2.17
CCDC89Q8N998 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.47□□□□□ -2.17
CCDC89Q8N998 AC073869.6-201ENST00000640656 341 ntBASIC1.47□□□□□ -2.17
CCDC89Q8N998 RNU1-22P-201ENST00000363334 158 ntBASIC1.46□□□□□ -2.18
CCDC89Q8N998 RNU4-76P-201ENST00000364509 141 ntBASIC1.46□□□□□ -2.18
CCDC89Q8N998 MIR1289-2-201ENST00000408360 111 ntBASIC1.46□□□□□ -2.18
CCDC89Q8N998 MIR548F5-201ENST00000408421 86 ntBASIC1.46□□□□□ -2.18
CCDC89Q8N998 RPS3AP52-201ENST00000435639 297 ntBASIC1.46□□□□□ -2.18
CCDC89Q8N998 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC1.46□□□□□ -2.18
CCDC89Q8N998 AC107399.1-201ENST00000451226 265 ntBASIC1.46□□□□□ -2.18
CCDC89Q8N998 PCNPP5-201ENST00000452246 481 ntBASIC1.46□□□□□ -2.18
CCDC89Q8N998 SNORD13-201ENST00000459299 104 ntBASIC1.46□□□□□ -2.18
CCDC89Q8N998 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.46□□□□□ -2.18
CCDC89Q8N998 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.46□□□□□ -2.18
CCDC89Q8N998 AL133216.2-202ENST00000634512 349 ntBASIC1.46□□□□□ -2.18
CCDC89Q8N998 AC073544.1-201ENST00000600110 1595 ntBASIC1.46□□□□□ -2.18
CCDC89Q8N998 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
CCDC89Q8N998 RNU6-879P-201ENST00000364328 108 ntBASIC1.45□□□□□ -2.18
CCDC89Q8N998 Y_RNA.265-201ENST00000364677 108 ntBASIC1.45□□□□□ -2.18
CCDC89Q8N998 RNU6-60P-201ENST00000364792 103 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms