Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 RNU6-625P-201ENST00000459412 107 ntBASIC2.04□□□□□ -2.08
PCDH20Q8N6Y1 RNU2-34P-201ENST00000516534 121 ntBASIC2.04□□□□□ -2.08
PCDH20Q8N6Y1 RNU6-1137P-201ENST00000517073 99 ntBASIC2.04□□□□□ -2.08
PCDH20Q8N6Y1 Y_RNA.715-201ENST00000517082 110 ntBASIC2.04□□□□□ -2.08
PCDH20Q8N6Y1 AC087441.2-201ENST00000529141 262 ntBASIC2.04□□□□□ -2.08
PCDH20Q8N6Y1 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
PCDH20Q8N6Y1 MIR4448-201ENST00000584360 86 ntBASIC2.04□□□□□ -2.08
PCDH20Q8N6Y1 AC011476.5-201ENST00000615594 130 ntBASIC2.04□□□□□ -2.08
PCDH20Q8N6Y1 AC010205.1-201ENST00000616668 449 ntBASIC2.04□□□□□ -2.08
PCDH20Q8N6Y1 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.03□□□□□ -2.08
PCDH20Q8N6Y1 LINC02555-201ENST00000563933 1951 ntBASIC2.03□□□□□ -2.08
PCDH20Q8N6Y1 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.03□□□□□ -2.08
PCDH20Q8N6Y1 RNU6-1264P-201ENST00000383891 107 ntBASIC2.03□□□□□ -2.08
PCDH20Q8N6Y1 RNU6-418P-201ENST00000384035 107 ntBASIC2.03□□□□□ -2.08
PCDH20Q8N6Y1 Y_RNA.458-201ENST00000384240 102 ntBASIC2.03□□□□□ -2.08
PCDH20Q8N6Y1 Y_RNA.471-201ENST00000384312 102 ntBASIC2.03□□□□□ -2.08
PCDH20Q8N6Y1 Y_RNA.498-201ENST00000384460 102 ntBASIC2.03□□□□□ -2.08
PCDH20Q8N6Y1 RNU6-1160P-201ENST00000384546 104 ntBASIC2.03□□□□□ -2.08
PCDH20Q8N6Y1 RNU6-1235P-201ENST00000384559 107 ntBASIC2.03□□□□□ -2.08
PCDH20Q8N6Y1 Y_RNA.551-201ENST00000384661 102 ntBASIC2.03□□□□□ -2.08
PCDH20Q8N6Y1 MIR29C-201ENST00000385231 88 ntBASIC2.03□□□□□ -2.08
PCDH20Q8N6Y1 RNA5SP270-201ENST00000411361 118 ntBASIC2.03□□□□□ -2.08
PCDH20Q8N6Y1 TOMM22P2-201ENST00000430735 237 ntBASIC2.03□□□□□ -2.08
PCDH20Q8N6Y1 RPEP5-201ENST00000441137 268 ntBASIC2.03□□□□□ -2.08
PCDH20Q8N6Y1 RNU6-498P-201ENST00000459468 107 ntBASIC2.03□□□□□ -2.08
PCDH20Q8N6Y1 RNU7-57P-201ENST00000459540 60 ntBASIC2.03□□□□□ -2.08
PCDH20Q8N6Y1 AC067942.3-201ENST00000512025 362 ntBASIC2.03□□□□□ -2.08
PCDH20Q8N6Y1 RNU6-408P-201ENST00000515910 100 ntBASIC2.03□□□□□ -2.08
PCDH20Q8N6Y1 RNU6-948P-201ENST00000516374 107 ntBASIC2.03□□□□□ -2.08
PCDH20Q8N6Y1 RNU6-107P-201ENST00000516643 102 ntBASIC2.03□□□□□ -2.08
PCDH20Q8N6Y1 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.03□□□□□ -2.08
PCDH20Q8N6Y1 AC113195.1-201ENST00000579952 141 ntBASIC2.03□□□□□ -2.08
PCDH20Q8N6Y1 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.03□□□□□ -2.08
PCDH20Q8N6Y1 AC009487.4-201ENST00000624969 3585 ntBASIC2.03□□□□□ -2.08
PCDH20Q8N6Y1 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
PCDH20Q8N6Y1 SNORD115-3-201ENST00000363100 82 ntBASIC2.02□□□□□ -2.09
PCDH20Q8N6Y1 RNU6-961P-201ENST00000363893 105 ntBASIC2.02□□□□□ -2.09
PCDH20Q8N6Y1 Y_RNA.380-201ENST00000365663 111 ntBASIC2.02□□□□□ -2.09
PCDH20Q8N6Y1 RNU6-160P-201ENST00000384591 107 ntBASIC2.02□□□□□ -2.09
PCDH20Q8N6Y1 MIR606-201ENST00000384851 96 ntBASIC2.02□□□□□ -2.09
PCDH20Q8N6Y1 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
PCDH20Q8N6Y1 MIR1252-201ENST00000408861 65 ntBASIC2.02□□□□□ -2.09
PCDH20Q8N6Y1 RNU6-985P-201ENST00000410182 104 ntBASIC2.02□□□□□ -2.09
PCDH20Q8N6Y1 RAB28P5-201ENST00000427490 651 ntBASIC2.02□□□□□ -2.09
PCDH20Q8N6Y1 AC016717.1-201ENST00000448918 286 ntBASIC2.02□□□□□ -2.09
PCDH20Q8N6Y1 U8.20-201ENST00000459445 131 ntBASIC2.02□□□□□ -2.09
PCDH20Q8N6Y1 SCARNA15.1-201ENST00000516384 125 ntBASIC2.02□□□□□ -2.09
PCDH20Q8N6Y1 RNU6-764P-201ENST00000516396 105 ntBASIC2.02□□□□□ -2.09
PCDH20Q8N6Y1 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.02□□□□□ -2.09
PCDH20Q8N6Y1 AL109918.3-201ENST00000603072 338 ntBASIC2.02□□□□□ -2.09
PCDH20Q8N6Y1 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.02□□□□□ -2.09
PCDH20Q8N6Y1 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.02□□□□□ -2.09
PCDH20Q8N6Y1 snoZ196.1-201ENST00000625269 89 ntBASIC2.02□□□□□ -2.09
PCDH20Q8N6Y1 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
PCDH20Q8N6Y1 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
PCDH20Q8N6Y1 CENPCP1-201ENST00000533085 2578 ntBASIC2.01□□□□□ -2.09
PCDH20Q8N6Y1 MIR410-201ENST00000362222 80 ntBASIC2.01□□□□□ -2.09
PCDH20Q8N6Y1 RNU6-1164P-201ENST00000364428 107 ntBASIC2.01□□□□□ -2.09
PCDH20Q8N6Y1 AC019129.1-201ENST00000403786 261 ntBASIC2.01□□□□□ -2.09
PCDH20Q8N6Y1 MIR1185-2-201ENST00000408687 86 ntBASIC2.01□□□□□ -2.09
PCDH20Q8N6Y1 RNU6-57P-201ENST00000411348 103 ntBASIC2.01□□□□□ -2.09
PCDH20Q8N6Y1 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.01□□□□□ -2.09
PCDH20Q8N6Y1 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.01□□□□□ -2.09
PCDH20Q8N6Y1 HMGN2P3-201ENST00000433603 273 ntBASIC2.01□□□□□ -2.09
PCDH20Q8N6Y1 HMGN2P5-201ENST00000436882 273 ntBASIC2.01□□□□□ -2.09
PCDH20Q8N6Y1 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.01□□□□□ -2.09
PCDH20Q8N6Y1 RNU1-131P-201ENST00000458943 161 ntBASIC2.01□□□□□ -2.09
PCDH20Q8N6Y1 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.01□□□□□ -2.09
PCDH20Q8N6Y1 RNA5SP364-201ENST00000516938 78 ntBASIC2.01□□□□□ -2.09
PCDH20Q8N6Y1 RNU6-856P-201ENST00000516959 98 ntBASIC2.01□□□□□ -2.09
PCDH20Q8N6Y1 Y_RNA.713-201ENST00000517013 96 ntBASIC2.01□□□□□ -2.09
PCDH20Q8N6Y1 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.01□□□□□ -2.09
PCDH20Q8N6Y1 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.01□□□□□ -2.09
PCDH20Q8N6Y1 Y_RNA.772-201ENST00000606692 102 ntBASIC2.01□□□□□ -2.09
PCDH20Q8N6Y1 PART1_1.1-201ENST00000611761 217 ntBASIC2.01□□□□□ -2.09
PCDH20Q8N6Y1 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.01□□□□□ -2.09
PCDH20Q8N6Y1 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.01□□□□□ -2.09
PCDH20Q8N6Y1 AC130454.1-201ENST00000622948 401 ntBASIC2.01□□□□□ -2.09
PCDH20Q8N6Y1 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.01□□□□□ -2.09
PCDH20Q8N6Y1 AP006437.1-201ENST00000641440 3685 ntBASIC2.01□□□□□ -2.09
PCDH20Q8N6Y1 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2□□□□□ -2.09
PCDH20Q8N6Y1 SNORD114-6-201ENST00000364393 72 ntBASIC2□□□□□ -2.09
PCDH20Q8N6Y1 SNORA63C-201ENST00000364578 129 ntBASIC2□□□□□ -2.09
PCDH20Q8N6Y1 Y_RNA.439-201ENST00000384119 94 ntBASIC2□□□□□ -2.09
PCDH20Q8N6Y1 SNORA40.19-201ENST00000390846 128 ntBASIC2□□□□□ -2.09
PCDH20Q8N6Y1 HMGN2P39-201ENST00000398005 273 ntBASIC2□□□□□ -2.09
PCDH20Q8N6Y1 AL356379.1-201ENST00000414105 126 ntBASIC2□□□□□ -2.09
PCDH20Q8N6Y1 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2□□□□□ -2.09
PCDH20Q8N6Y1 AC113618.1-201ENST00000416747 285 ntBASIC2□□□□□ -2.09
PCDH20Q8N6Y1 RNU6-221P-201ENST00000459541 99 ntBASIC2□□□□□ -2.09
PCDH20Q8N6Y1 AP002001.1-203ENST00000534002 267 ntBASIC2□□□□□ -2.09
PCDH20Q8N6Y1 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2□□□□□ -2.09
PCDH20Q8N6Y1 AL355297.3-201ENST00000604082 446 ntBASIC2□□□□□ -2.09
PCDH20Q8N6Y1 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2□□□□□ -2.09
PCDH20Q8N6Y1 MIR3674-201ENST00000636576 68 ntBASIC2□□□□□ -2.09
PCDH20Q8N6Y1 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2□□□□□ -2.09
PCDH20Q8N6Y1 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
PCDH20Q8N6Y1 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.99□□□□□ -2.09
PCDH20Q8N6Y1 Y_RNA.153-201ENST00000363615 91 ntBASIC1.99□□□□□ -2.09
PCDH20Q8N6Y1 RNU6-738P-201ENST00000384531 106 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 311.8 ms