Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 AL353149.1-201ENST00000610667 244 ntBASIC1.57□□□□□ -2.16
CCDC71Q8IV32 AC084781.2-201ENST00000615568 161 ntBASIC1.57□□□□□ -2.16
CCDC71Q8IV32 AC112487.2-201ENST00000637950 304 ntBASIC1.57□□□□□ -2.16
CCDC71Q8IV32 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.57□□□□□ -2.16
CCDC71Q8IV32 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
CCDC71Q8IV32 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.57□□□□□ -2.16
CCDC71Q8IV32 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.56□□□□□ -2.16
CCDC71Q8IV32 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.56□□□□□ -2.16
CCDC71Q8IV32 RNU6-490P-201ENST00000362985 107 ntBASIC1.56□□□□□ -2.16
CCDC71Q8IV32 Y_RNA.187-201ENST00000363918 113 ntBASIC1.56□□□□□ -2.16
CCDC71Q8IV32 SNORD87-201ENST00000364849 89 ntBASIC1.56□□□□□ -2.16
CCDC71Q8IV32 RNU6-1145P-201ENST00000384246 107 ntBASIC1.56□□□□□ -2.16
CCDC71Q8IV32 MIR625-201ENST00000385047 85 ntBASIC1.56□□□□□ -2.16
CCDC71Q8IV32 MIR1185-2-201ENST00000408687 86 ntBASIC1.56□□□□□ -2.16
CCDC71Q8IV32 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.56□□□□□ -2.16
CCDC71Q8IV32 AC244636.1-201ENST00000421152 228 ntBASIC1.56□□□□□ -2.16
CCDC71Q8IV32 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.56□□□□□ -2.16
CCDC71Q8IV32 AC236972.2-201ENST00000434979 310 ntBASIC1.56□□□□□ -2.16
CCDC71Q8IV32 RPL23AP6-201ENST00000446637 472 ntBASIC1.56□□□□□ -2.16
CCDC71Q8IV32 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.56□□□□□ -2.16
CCDC71Q8IV32 RNU7-4P-201ENST00000516961 62 ntBASIC1.56□□□□□ -2.16
CCDC71Q8IV32 SUB1P4-201ENST00000566062 339 ntBASIC1.56□□□□□ -2.16
CCDC71Q8IV32 MIR4303-201ENST00000581299 66 ntBASIC1.56□□□□□ -2.16
CCDC71Q8IV32 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.56□□□□□ -2.16
CCDC71Q8IV32 MIR502-201ENST00000606349 86 ntBASIC1.56□□□□□ -2.16
CCDC71Q8IV32 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.56□□□□□ -2.16
CCDC71Q8IV32 MTND5P10-201ENST00000603719 1809 ntBASIC1.56□□□□□ -2.16
CCDC71Q8IV32 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
CCDC71Q8IV32 Y_RNA.67-201ENST00000362870 100 ntBASIC1.55□□□□□ -2.16
CCDC71Q8IV32 AL117342.1-201ENST00000404861 406 ntBASIC1.55□□□□□ -2.16
CCDC71Q8IV32 RNU6-1001P-201ENST00000411265 100 ntBASIC1.55□□□□□ -2.16
CCDC71Q8IV32 RNU6-57P-201ENST00000411348 103 ntBASIC1.55□□□□□ -2.16
CCDC71Q8IV32 AC009310.1-201ENST00000414414 451 ntBASIC1.55□□□□□ -2.16
CCDC71Q8IV32 AC114482.1-201ENST00000418010 247 ntBASIC1.55□□□□□ -2.16
CCDC71Q8IV32 U8.22-201ENST00000459141 133 ntBASIC1.55□□□□□ -2.16
CCDC71Q8IV32 RNU6-1041P-201ENST00000516254 102 ntBASIC1.55□□□□□ -2.16
CCDC71Q8IV32 Y_RNA.673-201ENST00000516306 88 ntBASIC1.55□□□□□ -2.16
CCDC71Q8IV32 RN7SKP49-201ENST00000516675 260 ntBASIC1.55□□□□□ -2.16
CCDC71Q8IV32 AC025647.1-201ENST00000517879 253 ntBASIC1.55□□□□□ -2.16
CCDC71Q8IV32 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.55□□□□□ -2.16
CCDC71Q8IV32 AC010900.2-201ENST00000604508 210 ntBASIC1.55□□□□□ -2.16
CCDC71Q8IV32 Y_RNA.804-201ENST00000615262 101 ntBASIC1.55□□□□□ -2.16
CCDC71Q8IV32 AC087588.2-201ENST00000617667 426 ntBASIC1.55□□□□□ -2.16
CCDC71Q8IV32 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.55□□□□□ -2.16
CCDC71Q8IV32 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
CCDC71Q8IV32 RNU4-73P-201ENST00000363164 141 ntBASIC1.54□□□□□ -2.16
CCDC71Q8IV32 RNU6-1040P-201ENST00000383974 107 ntBASIC1.54□□□□□ -2.16
CCDC71Q8IV32 MIR559-201ENST00000385188 96 ntBASIC1.54□□□□□ -2.16
CCDC71Q8IV32 SNORA69.1-201ENST00000390904 137 ntBASIC1.54□□□□□ -2.16
CCDC71Q8IV32 RNA5SP100-201ENST00000410903 110 ntBASIC1.54□□□□□ -2.16
CCDC71Q8IV32 RNA5SP59-201ENST00000410922 110 ntBASIC1.54□□□□□ -2.16
CCDC71Q8IV32 AC008134.1-201ENST00000420943 193 ntBASIC1.54□□□□□ -2.16
CCDC71Q8IV32 AC099677.2-201ENST00000436385 175 ntBASIC1.54□□□□□ -2.16
CCDC71Q8IV32 AC099799.1-201ENST00000439809 192 ntBASIC1.54□□□□□ -2.16
CCDC71Q8IV32 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.54□□□□□ -2.16
CCDC71Q8IV32 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.54□□□□□ -2.16
CCDC71Q8IV32 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.54□□□□□ -2.16
CCDC71Q8IV32 RNU6-1146P-201ENST00000516282 102 ntBASIC1.54□□□□□ -2.16
CCDC71Q8IV32 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.54□□□□□ -2.16
CCDC71Q8IV32 AC091144.1-201ENST00000519573 138 ntBASIC1.54□□□□□ -2.16
CCDC71Q8IV32 AC144568.1-201ENST00000520139 137 ntBASIC1.54□□□□□ -2.16
CCDC71Q8IV32 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.54□□□□□ -2.16
CCDC71Q8IV32 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.54□□□□□ -2.16
CCDC71Q8IV32 AC093027.1-201ENST00000546698 429 ntBASIC1.54□□□□□ -2.16
CCDC71Q8IV32 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.54□□□□□ -2.16
CCDC71Q8IV32 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.54□□□□□ -2.16
CCDC71Q8IV32 AC073544.1-201ENST00000600110 1595 ntBASIC1.54□□□□□ -2.16
CCDC71Q8IV32 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.53□□□□□ -2.16
CCDC71Q8IV32 RNU6-862P-201ENST00000362804 105 ntBASIC1.53□□□□□ -2.16
CCDC71Q8IV32 RNU6-879P-201ENST00000364328 108 ntBASIC1.53□□□□□ -2.16
CCDC71Q8IV32 Y_RNA.592-201ENST00000410274 109 ntBASIC1.53□□□□□ -2.16
CCDC71Q8IV32 CST2P1-201ENST00000425770 87 ntBASIC1.53□□□□□ -2.16
CCDC71Q8IV32 MTND4P28-201ENST00000426217 387 ntBASIC1.53□□□□□ -2.16
CCDC71Q8IV32 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.53□□□□□ -2.16
CCDC71Q8IV32 PCNPP5-201ENST00000452246 481 ntBASIC1.53□□□□□ -2.16
CCDC71Q8IV32 AC074133.1-201ENST00000515696 183 ntBASIC1.53□□□□□ -2.16
CCDC71Q8IV32 AC022868.1-201ENST00000517767 391 ntBASIC1.53□□□□□ -2.16
CCDC71Q8IV32 RAB11AP2-201ENST00000545905 639 ntBASIC1.53□□□□□ -2.16
CCDC71Q8IV32 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.53□□□□□ -2.16
CCDC71Q8IV32 AC022254.1-201ENST00000567857 235 ntBASIC1.53□□□□□ -2.16
CCDC71Q8IV32 MIR4285-201ENST00000581001 85 ntBASIC1.53□□□□□ -2.16
CCDC71Q8IV32 MIR4795-201ENST00000584182 89 ntBASIC1.53□□□□□ -2.16
CCDC71Q8IV32 AL117336.2-201ENST00000602435 335 ntBASIC1.53□□□□□ -2.16
CCDC71Q8IV32 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.53□□□□□ -2.16
CCDC71Q8IV32 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.53□□□□□ -2.16
CCDC71Q8IV32 MIR338-201ENST00000636369 67 ntBASIC1.53□□□□□ -2.16
CCDC71Q8IV32 snoU2-30.2-201ENST00000362805 70 ntBASIC1.52□□□□□ -2.17
CCDC71Q8IV32 Y_RNA.146-201ENST00000363549 102 ntBASIC1.52□□□□□ -2.17
CCDC71Q8IV32 RNU1-96P-201ENST00000364163 162 ntBASIC1.52□□□□□ -2.17
CCDC71Q8IV32 RNU6-1240P-201ENST00000365155 104 ntBASIC1.52□□□□□ -2.17
CCDC71Q8IV32 RNU6-318P-201ENST00000384283 103 ntBASIC1.52□□□□□ -2.17
CCDC71Q8IV32 AC016909.1-201ENST00000415916 166 ntBASIC1.52□□□□□ -2.17
CCDC71Q8IV32 AP1B1P2-201ENST00000416196 106 ntBASIC1.52□□□□□ -2.17
CCDC71Q8IV32 AF228730.4-201ENST00000421457 183 ntBASIC1.52□□□□□ -2.17
CCDC71Q8IV32 AC092473.1-201ENST00000441098 221 ntBASIC1.52□□□□□ -2.17
CCDC71Q8IV32 RNU1-98P-201ENST00000458992 160 ntBASIC1.52□□□□□ -2.17
CCDC71Q8IV32 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.52□□□□□ -2.17
CCDC71Q8IV32 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.52□□□□□ -2.17
CCDC71Q8IV32 MIR5094-201ENST00000578766 85 ntBASIC1.52□□□□□ -2.17
CCDC71Q8IV32 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 130.7 ms