Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.71□□□□□ -2.14
PRPF39Q86UA1 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
PRPF39Q86UA1 RPL23AP36-201ENST00000413895 458 ntBASIC1.71□□□□□ -2.14
PRPF39Q86UA1 SCARNA16.2-201ENST00000516520 172 ntBASIC1.71□□□□□ -2.14
PRPF39Q86UA1 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.71□□□□□ -2.14
PRPF39Q86UA1 AC091144.1-201ENST00000519573 138 ntBASIC1.71□□□□□ -2.14
PRPF39Q86UA1 AC027419.1-201ENST00000522976 328 ntBASIC1.71□□□□□ -2.14
PRPF39Q86UA1 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.71□□□□□ -2.14
PRPF39Q86UA1 AC004584.2-201ENST00000570407 410 ntBASIC1.71□□□□□ -2.14
PRPF39Q86UA1 MIR4255-201ENST00000579351 72 ntBASIC1.71□□□□□ -2.14
PRPF39Q86UA1 MIR4422-201ENST00000581938 83 ntBASIC1.71□□□□□ -2.14
PRPF39Q86UA1 AC022432.1-201ENST00000595739 310 ntBASIC1.71□□□□□ -2.14
PRPF39Q86UA1 AC092794.2-201ENST00000620933 563 ntBASIC1.71□□□□□ -2.14
PRPF39Q86UA1 MIR378A-201ENST00000362177 66 ntBASIC1.7□□□□□ -2.14
PRPF39Q86UA1 SNORA4.2-201ENST00000365313 147 ntBASIC1.7□□□□□ -2.14
PRPF39Q86UA1 Y_RNA.404-201ENST00000383978 102 ntBASIC1.7□□□□□ -2.14
PRPF39Q86UA1 SNORA17.3-201ENST00000391159 129 ntBASIC1.7□□□□□ -2.14
PRPF39Q86UA1 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.7□□□□□ -2.14
PRPF39Q86UA1 TOMM22P2-201ENST00000430735 237 ntBASIC1.7□□□□□ -2.14
PRPF39Q86UA1 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.7□□□□□ -2.14
PRPF39Q86UA1 MTND4P17-201ENST00000470444 350 ntBASIC1.7□□□□□ -2.14
PRPF39Q86UA1 RPS26P45-201ENST00000471748 340 ntBASIC1.7□□□□□ -2.14
PRPF39Q86UA1 AC116353.2-201ENST00000505332 712 ntBASIC1.7□□□□□ -2.14
PRPF39Q86UA1 AC108729.3-201ENST00000513484 108 ntBASIC1.7□□□□□ -2.14
PRPF39Q86UA1 AC022868.1-201ENST00000517767 391 ntBASIC1.7□□□□□ -2.14
PRPF39Q86UA1 CYCSP23-201ENST00000519781 313 ntBASIC1.7□□□□□ -2.14
PRPF39Q86UA1 AC105029.1-201ENST00000520250 669 ntBASIC1.7□□□□□ -2.14
PRPF39Q86UA1 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.7□□□□□ -2.14
PRPF39Q86UA1 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.7□□□□□ -2.14
PRPF39Q86UA1 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.7□□□□□ -2.14
PRPF39Q86UA1 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.7□□□□□ -2.14
PRPF39Q86UA1 Y_RNA.166-201ENST00000363730 102 ntBASIC1.69□□□□□ -2.14
PRPF39Q86UA1 Y_RNA.358-201ENST00000365491 99 ntBASIC1.69□□□□□ -2.14
PRPF39Q86UA1 RNU6-950P-201ENST00000384651 107 ntBASIC1.69□□□□□ -2.14
PRPF39Q86UA1 RNA5SP109-201ENST00000391010 116 ntBASIC1.69□□□□□ -2.14
PRPF39Q86UA1 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.69□□□□□ -2.14
PRPF39Q86UA1 SNORA77B-201ENST00000578179 125 ntBASIC1.69□□□□□ -2.14
PRPF39Q86UA1 AP001485.1-201ENST00000604799 199 ntBASIC1.69□□□□□ -2.14
PRPF39Q86UA1 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.69□□□□□ -2.14
PRPF39Q86UA1 AL669831.3-213ENST00000636676 183 ntBASIC1.69□□□□□ -2.14
PRPF39Q86UA1 TPTEP1-208ENST00000636884 213 ntBASIC1.69□□□□□ -2.14
PRPF39Q86UA1 Y_RNA.557-201ENST00000384680 107 ntBASIC1.68□□□□□ -2.14
PRPF39Q86UA1 EIF1P2-201ENST00000428233 350 ntBASIC1.68□□□□□ -2.14
PRPF39Q86UA1 RPS27P22-201ENST00000478056 241 ntBASIC1.68□□□□□ -2.14
PRPF39Q86UA1 RPL17P19-201ENST00000489069 552 ntBASIC1.68□□□□□ -2.14
PRPF39Q86UA1 RNU6-970P-201ENST00000516312 107 ntBASIC1.68□□□□□ -2.14
PRPF39Q86UA1 RNU6-264P-201ENST00000517134 104 ntBASIC1.68□□□□□ -2.14
PRPF39Q86UA1 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.68□□□□□ -2.14
PRPF39Q86UA1 FRG2DP-202ENST00000566967 323 ntBASIC1.68□□□□□ -2.14
PRPF39Q86UA1 AC125232.2-201ENST00000592457 143 ntBASIC1.68□□□□□ -2.14
PRPF39Q86UA1 RNU6-271P-201ENST00000363858 105 ntBASIC1.67□□□□□ -2.14
PRPF39Q86UA1 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.67□□□□□ -2.14
PRPF39Q86UA1 FGF7P8-201ENST00000402994 292 ntBASIC1.67□□□□□ -2.14
PRPF39Q86UA1 RNU6-370P-201ENST00000411008 104 ntBASIC1.67□□□□□ -2.14
PRPF39Q86UA1 AC005002.2-201ENST00000438228 269 ntBASIC1.67□□□□□ -2.14
PRPF39Q86UA1 RNU6-1213P-201ENST00000517075 94 ntBASIC1.67□□□□□ -2.14
PRPF39Q86UA1 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.67□□□□□ -2.14
PRPF39Q86UA1 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.67□□□□□ -2.14
PRPF39Q86UA1 MIR4498-201ENST00000577599 66 ntBASIC1.67□□□□□ -2.14
PRPF39Q86UA1 AC104260.1-201ENST00000616660 539 ntBASIC1.67□□□□□ -2.14
PRPF39Q86UA1 AC095038.3-201ENST00000634439 195 ntBASIC1.67□□□□□ -2.14
PRPF39Q86UA1 AC006026.1-201ENST00000444025 1803 ntBASIC1.67□□□□□ -2.14
PRPF39Q86UA1 RNU1-78P-201ENST00000391248 165 ntBASIC1.66□□□□□ -2.14
PRPF39Q86UA1 RPL21P1-201ENST00000399532 476 ntBASIC1.66□□□□□ -2.14
PRPF39Q86UA1 RPS20P15-201ENST00000412792 311 ntBASIC1.66□□□□□ -2.14
PRPF39Q86UA1 PDCL2P1-201ENST00000419302 352 ntBASIC1.66□□□□□ -2.14
PRPF39Q86UA1 AC079140.2-201ENST00000506193 142 ntBASIC1.66□□□□□ -2.14
PRPF39Q86UA1 Y_RNA.691-201ENST00000516611 103 ntBASIC1.66□□□□□ -2.14
PRPF39Q86UA1 MIR4438-201ENST00000585271 93 ntBASIC1.66□□□□□ -2.14
PRPF39Q86UA1 MIR1244-1-201ENST00000612829 85 ntBASIC1.66□□□□□ -2.14
PRPF39Q86UA1 U6.73-201ENST00000619194 103 ntBASIC1.66□□□□□ -2.14
PRPF39Q86UA1 MIR1244-3-201ENST00000635744 85 ntBASIC1.66□□□□□ -2.14
PRPF39Q86UA1 MIR1244-2-201ENST00000636449 85 ntBASIC1.66□□□□□ -2.14
PRPF39Q86UA1 MIR1244-4-202ENST00000636813 85 ntBASIC1.66□□□□□ -2.14
PRPF39Q86UA1 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.66□□□□□ -2.14
PRPF39Q86UA1 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
PRPF39Q86UA1 RNU6-874P-201ENST00000362390 105 ntBASIC1.65□□□□□ -2.15
PRPF39Q86UA1 RNA5SP361-201ENST00000362686 118 ntBASIC1.65□□□□□ -2.15
PRPF39Q86UA1 SNORD33-201ENST00000362761 85 ntBASIC1.65□□□□□ -2.15
PRPF39Q86UA1 SNORD81.2-201ENST00000365153 76 ntBASIC1.65□□□□□ -2.15
PRPF39Q86UA1 RNU6-1264P-201ENST00000383891 107 ntBASIC1.65□□□□□ -2.15
PRPF39Q86UA1 RNU6-203P-201ENST00000384038 104 ntBASIC1.65□□□□□ -2.15
PRPF39Q86UA1 Y_RNA.498-201ENST00000384460 102 ntBASIC1.65□□□□□ -2.15
PRPF39Q86UA1 MIR329-1-201ENST00000385028 80 ntBASIC1.65□□□□□ -2.15
PRPF39Q86UA1 AC114482.1-201ENST00000418010 247 ntBASIC1.65□□□□□ -2.15
PRPF39Q86UA1 BTF3P4-201ENST00000418852 495 ntBASIC1.65□□□□□ -2.15
PRPF39Q86UA1 AC098614.3-201ENST00000438957 440 ntBASIC1.65□□□□□ -2.15
PRPF39Q86UA1 SNORD65B-201ENST00000459126 73 ntBASIC1.65□□□□□ -2.15
PRPF39Q86UA1 MIR2053-201ENST00000459295 91 ntBASIC1.65□□□□□ -2.15
PRPF39Q86UA1 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.65□□□□□ -2.15
PRPF39Q86UA1 AC010469.2-201ENST00000496412 480 ntBASIC1.65□□□□□ -2.15
PRPF39Q86UA1 PRDX4P1-201ENST00000507189 574 ntBASIC1.65□□□□□ -2.15
PRPF39Q86UA1 RNU6-1053P-201ENST00000515930 101 ntBASIC1.65□□□□□ -2.15
PRPF39Q86UA1 AC019176.1-201ENST00000518519 225 ntBASIC1.65□□□□□ -2.15
PRPF39Q86UA1 AC023157.2-201ENST00000540596 141 ntBASIC1.65□□□□□ -2.15
PRPF39Q86UA1 SNORD53B-201ENST00000577887 78 ntBASIC1.65□□□□□ -2.15
PRPF39Q86UA1 MIR3937-201ENST00000580135 106 ntBASIC1.65□□□□□ -2.15
PRPF39Q86UA1 MIR5690-201ENST00000583739 73 ntBASIC1.65□□□□□ -2.15
PRPF39Q86UA1 AL929325.1-201ENST00000603096 117 ntBASIC1.65□□□□□ -2.15
PRPF39Q86UA1 snoU13.31-201ENST00000607291 104 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 202.5 ms