Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 AL135786.1-201ENST00000415892 214 ntBASIC3.52□□□□□ -1.85
RNF43Q68DV7 RPL23AP82-202ENST00000427528 469 ntBASIC3.52□□□□□ -1.85
RNF43Q68DV7 VDAC1P3-201ENST00000434069 851 ntBASIC3.52□□□□□ -1.85
RNF43Q68DV7 RPL23AP7-203ENST00000449021 469 ntBASIC3.52□□□□□ -1.85
RNF43Q68DV7 CENPBD1P1-201ENST00000464061 469 ntBASIC3.52□□□□□ -1.85
RNF43Q68DV7 AC107626.1-201ENST00000471084 183 ntBASIC3.52□□□□□ -1.85
RNF43Q68DV7 RNU6-1299P-201ENST00000516316 100 ntBASIC3.52□□□□□ -1.85
RNF43Q68DV7 MIR5680-201ENST00000577577 84 ntBASIC3.52□□□□□ -1.85
RNF43Q68DV7 AL049861.1-201ENST00000603130 150 ntBASIC3.52□□□□□ -1.85
RNF43Q68DV7 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
RNF43Q68DV7 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
RNF43Q68DV7 MIR148B-201ENST00000362252 99 ntBASIC3.51□□□□□ -1.85
RNF43Q68DV7 SNORD56.3-201ENST00000363507 71 ntBASIC3.51□□□□□ -1.85
RNF43Q68DV7 Y_RNA.348-201ENST00000365403 103 ntBASIC3.51□□□□□ -1.85
RNF43Q68DV7 SNORA26.2-201ENST00000390922 122 ntBASIC3.51□□□□□ -1.85
RNF43Q68DV7 MIR873-201ENST00000401120 77 ntBASIC3.51□□□□□ -1.85
RNF43Q68DV7 AL355796.1-201ENST00000406706 323 ntBASIC3.51□□□□□ -1.85
RNF43Q68DV7 RPL39P40-201ENST00000445481 146 ntBASIC3.51□□□□□ -1.85
RNF43Q68DV7 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.51□□□□□ -1.85
RNF43Q68DV7 RN7SL429P-201ENST00000479090 223 ntBASIC3.51□□□□□ -1.85
RNF43Q68DV7 RN7SL489P-201ENST00000486185 223 ntBASIC3.51□□□□□ -1.85
RNF43Q68DV7 RN7SL327P-201ENST00000488659 223 ntBASIC3.51□□□□□ -1.85
RNF43Q68DV7 RN7SL504P-201ENST00000494496 287 ntBASIC3.51□□□□□ -1.85
RNF43Q68DV7 AC006445.2-201ENST00000510061 472 ntBASIC3.51□□□□□ -1.85
RNF43Q68DV7 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.51□□□□□ -1.85
RNF43Q68DV7 SNORA70.19-201ENST00000516717 90 ntBASIC3.51□□□□□ -1.85
RNF43Q68DV7 HSPE1P18-201ENST00000517602 280 ntBASIC3.51□□□□□ -1.85
RNF43Q68DV7 AL160236.1-201ENST00000556317 195 ntBASIC3.51□□□□□ -1.85
RNF43Q68DV7 HMGN2P15-201ENST00000585707 270 ntBASIC3.51□□□□□ -1.85
RNF43Q68DV7 RPS15AP11-201ENST00000594193 385 ntBASIC3.51□□□□□ -1.85
RNF43Q68DV7 AC107294.3-201ENST00000609211 526 ntBASIC3.51□□□□□ -1.85
RNF43Q68DV7 RN7SL853P-201ENST00000617250 223 ntBASIC3.51□□□□□ -1.85
RNF43Q68DV7 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.51□□□□□ -1.85
RNF43Q68DV7 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
RNF43Q68DV7 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
RNF43Q68DV7 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
RNF43Q68DV7 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.5□□□□□ -1.85
RNF43Q68DV7 AC007256.1-201ENST00000392253 2765 ntBASIC3.5□□□□□ -1.85
RNF43Q68DV7 SNORD114-7-201ENST00000362520 77 ntBASIC3.5□□□□□ -1.85
RNF43Q68DV7 RNU6-640P-201ENST00000363693 105 ntBASIC3.5□□□□□ -1.85
RNF43Q68DV7 SNORA72-201ENST00000384339 132 ntBASIC3.5□□□□□ -1.85
RNF43Q68DV7 RNU2-37P-201ENST00000410695 177 ntBASIC3.5□□□□□ -1.85
RNF43Q68DV7 AL121890.1-201ENST00000435457 205 ntBASIC3.5□□□□□ -1.85
RNF43Q68DV7 HMGN2P7-201ENST00000456186 273 ntBASIC3.5□□□□□ -1.85
RNF43Q68DV7 AP002884.2-201ENST00000471647 395 ntBASIC3.5□□□□□ -1.85
RNF43Q68DV7 RNA5SP380-201ENST00000517190 98 ntBASIC3.5□□□□□ -1.85
RNF43Q68DV7 AL021707.8-201ENST00000609428 183 ntBASIC3.5□□□□□ -1.85
RNF43Q68DV7 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
RNF43Q68DV7 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.5□□□□□ -1.85
RNF43Q68DV7 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.49□□□□□ -1.85
RNF43Q68DV7 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
RNF43Q68DV7 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.49□□□□□ -1.85
RNF43Q68DV7 RNU6-674P-201ENST00000363831 107 ntBASIC3.49□□□□□ -1.85
RNF43Q68DV7 SNORD6-201ENST00000365444 73 ntBASIC3.49□□□□□ -1.85
RNF43Q68DV7 DYNLT3P1-201ENST00000378574 347 ntBASIC3.49□□□□□ -1.85
RNF43Q68DV7 MIR1185-2-201ENST00000408687 86 ntBASIC3.49□□□□□ -1.85
RNF43Q68DV7 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.49□□□□□ -1.85
RNF43Q68DV7 snoU13.14-201ENST00000459372 104 ntBASIC3.49□□□□□ -1.85
RNF43Q68DV7 RPL23AP62-201ENST00000463396 453 ntBASIC3.49□□□□□ -1.85
RNF43Q68DV7 S100A11P2-201ENST00000467589 312 ntBASIC3.49□□□□□ -1.85
RNF43Q68DV7 RNA5SP341-201ENST00000516261 117 ntBASIC3.49□□□□□ -1.85
RNF43Q68DV7 MIR3690-201ENST00000580266 75 ntBASIC3.49□□□□□ -1.85
RNF43Q68DV7 AC091152.3-201ENST00000604227 325 ntBASIC3.49□□□□□ -1.85
RNF43Q68DV7 AC005972.2-201ENST00000604690 348 ntBASIC3.49□□□□□ -1.85
RNF43Q68DV7 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
RNF43Q68DV7 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.49□□□□□ -1.85
RNF43Q68DV7 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.49□□□□□ -1.85
RNF43Q68DV7 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
RNF43Q68DV7 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
RNF43Q68DV7 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
RNF43Q68DV7 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.48□□□□□ -1.85
RNF43Q68DV7 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
RNF43Q68DV7 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
RNF43Q68DV7 RNU6-50P-201ENST00000362356 103 ntBASIC3.48□□□□□ -1.85
RNF43Q68DV7 RNU6-1010P-201ENST00000362757 107 ntBASIC3.48□□□□□ -1.85
RNF43Q68DV7 RNU6-1131P-201ENST00000364955 107 ntBASIC3.48□□□□□ -1.85
RNF43Q68DV7 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.48□□□□□ -1.85
RNF43Q68DV7 RPS3P1-201ENST00000456781 192 ntBASIC3.48□□□□□ -1.85
RNF43Q68DV7 RPL27AP5-201ENST00000469428 449 ntBASIC3.48□□□□□ -1.85
RNF43Q68DV7 RNU7-116P-201ENST00000516940 62 ntBASIC3.48□□□□□ -1.85
RNF43Q68DV7 RNU6-762P-201ENST00000517107 102 ntBASIC3.48□□□□□ -1.85
RNF43Q68DV7 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.48□□□□□ -1.85
RNF43Q68DV7 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.48□□□□□ -1.85
RNF43Q68DV7 AC018630.3-201ENST00000542637 96 ntBASIC3.48□□□□□ -1.85
RNF43Q68DV7 AL022345.2-201ENST00000606307 135 ntBASIC3.48□□□□□ -1.85
RNF43Q68DV7 AC073308.1-201ENST00000623696 305 ntBASIC3.48□□□□□ -1.85
RNF43Q68DV7 AC073476.4-201ENST00000628409 72 ntBASIC3.48□□□□□ -1.85
RNF43Q68DV7 AL596211.1-201ENST00000569873 2277 ntBASIC3.47□□□□□ -1.85
RNF43Q68DV7 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.47□□□□□ -1.85
RNF43Q68DV7 AL356292.1-201ENST00000283110 373 ntBASIC3.47□□□□□ -1.85
RNF43Q68DV7 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
RNF43Q68DV7 Y_RNA.91-201ENST00000363042 107 ntBASIC3.47□□□□□ -1.85
RNF43Q68DV7 Y_RNA.281-201ENST00000364774 94 ntBASIC3.47□□□□□ -1.85
RNF43Q68DV7 SNORD72-201ENST00000390994 80 ntBASIC3.47□□□□□ -1.85
RNF43Q68DV7 SNORA12-201ENST00000391162 147 ntBASIC3.47□□□□□ -1.85
RNF43Q68DV7 HSPE1P26-201ENST00000405341 275 ntBASIC3.47□□□□□ -1.85
RNF43Q68DV7 RNU2-70P-201ENST00000410718 179 ntBASIC3.47□□□□□ -1.85
RNF43Q68DV7 HMGN2P32-201ENST00000444648 269 ntBASIC3.47□□□□□ -1.85
RNF43Q68DV7 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.47□□□□□ -1.85
RNF43Q68DV7 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 148.7 ms