Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
RSPO4Q2I0M5 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
RSPO4Q2I0M5 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
RSPO4Q2I0M5 Y_RNA.40-201ENST00000362645 93 ntBASIC3.48□□□□□ -1.85
RSPO4Q2I0M5 SNORD115-13-201ENST00000363358 82 ntBASIC3.48□□□□□ -1.85
RSPO4Q2I0M5 SNORD115-16-201ENST00000363887 82 ntBASIC3.48□□□□□ -1.85
RSPO4Q2I0M5 RNU6-335P-201ENST00000364563 113 ntBASIC3.48□□□□□ -1.85
RSPO4Q2I0M5 SNORD115-1-201ENST00000364961 82 ntBASIC3.48□□□□□ -1.85
RSPO4Q2I0M5 MIR181A2-201ENST00000384863 110 ntBASIC3.48□□□□□ -1.85
RSPO4Q2I0M5 RNU6-644P-201ENST00000391155 98 ntBASIC3.48□□□□□ -1.85
RSPO4Q2I0M5 RNA5SP293-201ENST00000410527 113 ntBASIC3.48□□□□□ -1.85
RSPO4Q2I0M5 RNU6-402P-201ENST00000410678 103 ntBASIC3.48□□□□□ -1.85
RSPO4Q2I0M5 TOMM22P1-201ENST00000418578 312 ntBASIC3.48□□□□□ -1.85
RSPO4Q2I0M5 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.48□□□□□ -1.85
RSPO4Q2I0M5 AL356535.1-201ENST00000440335 398 ntBASIC3.48□□□□□ -1.85
RSPO4Q2I0M5 SNORD65B-201ENST00000459126 73 ntBASIC3.48□□□□□ -1.85
RSPO4Q2I0M5 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
RSPO4Q2I0M5 RNU6ATAC12P-201ENST00000516542 115 ntBASIC3.48□□□□□ -1.85
RSPO4Q2I0M5 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.48□□□□□ -1.85
RSPO4Q2I0M5 SNRPGP15-201ENST00000600149 222 ntBASIC3.48□□□□□ -1.85
RSPO4Q2I0M5 HSPE1P7-201ENST00000604681 321 ntBASIC3.48□□□□□ -1.85
RSPO4Q2I0M5 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.48□□□□□ -1.85
RSPO4Q2I0M5 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
RSPO4Q2I0M5 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
RSPO4Q2I0M5 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
RSPO4Q2I0M5 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
RSPO4Q2I0M5 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
RSPO4Q2I0M5 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
RSPO4Q2I0M5 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
RSPO4Q2I0M5 RNU6-529P-201ENST00000363383 104 ntBASIC3.47□□□□□ -1.85
RSPO4Q2I0M5 RNU6-1099P-201ENST00000363533 107 ntBASIC3.47□□□□□ -1.85
RSPO4Q2I0M5 RNU1-133P-201ENST00000364867 167 ntBASIC3.47□□□□□ -1.85
RSPO4Q2I0M5 SNORD116-22-201ENST00000384430 92 ntBASIC3.47□□□□□ -1.85
RSPO4Q2I0M5 SNORA44-201ENST00000384584 132 ntBASIC3.47□□□□□ -1.85
RSPO4Q2I0M5 RNA5SP424-201ENST00000390988 115 ntBASIC3.47□□□□□ -1.85
RSPO4Q2I0M5 RNA5SP354-201ENST00000391247 136 ntBASIC3.47□□□□□ -1.85
RSPO4Q2I0M5 AC096949.1-201ENST00000412047 152 ntBASIC3.47□□□□□ -1.85
RSPO4Q2I0M5 AC107083.1-201ENST00000439643 279 ntBASIC3.47□□□□□ -1.85
RSPO4Q2I0M5 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.47□□□□□ -1.85
RSPO4Q2I0M5 HMGN2P9-201ENST00000476875 229 ntBASIC3.47□□□□□ -1.85
RSPO4Q2I0M5 AC107934.2-201ENST00000518653 310 ntBASIC3.47□□□□□ -1.85
RSPO4Q2I0M5 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC3.47□□□□□ -1.85
RSPO4Q2I0M5 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.47□□□□□ -1.85
RSPO4Q2I0M5 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.47□□□□□ -1.85
RSPO4Q2I0M5 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.47□□□□□ -1.85
RSPO4Q2I0M5 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
RSPO4Q2I0M5 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.47□□□□□ -1.85
RSPO4Q2I0M5 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
RSPO4Q2I0M5 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
RSPO4Q2I0M5 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
RSPO4Q2I0M5 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
RSPO4Q2I0M5 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
RSPO4Q2I0M5 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
RSPO4Q2I0M5 Y_RNA.10-201ENST00000362371 110 ntBASIC3.46□□□□□ -1.86
RSPO4Q2I0M5 SNORA51.4-201ENST00000364993 124 ntBASIC3.46□□□□□ -1.86
RSPO4Q2I0M5 RNU6-117P-201ENST00000365415 107 ntBASIC3.46□□□□□ -1.86
RSPO4Q2I0M5 SNORA1.3-201ENST00000384676 136 ntBASIC3.46□□□□□ -1.86
RSPO4Q2I0M5 RNU6-816P-201ENST00000390914 107 ntBASIC3.46□□□□□ -1.86
RSPO4Q2I0M5 RNU6-1268P-201ENST00000391214 107 ntBASIC3.46□□□□□ -1.86
RSPO4Q2I0M5 RNU6-1239P-201ENST00000391310 107 ntBASIC3.46□□□□□ -1.86
RSPO4Q2I0M5 AC004552.1-201ENST00000419089 348 ntBASIC3.46□□□□□ -1.86
RSPO4Q2I0M5 AC063976.3-201ENST00000426849 329 ntBASIC3.46□□□□□ -1.86
RSPO4Q2I0M5 RPS26P3-201ENST00000470205 348 ntBASIC3.46□□□□□ -1.86
RSPO4Q2I0M5 AC090543.2-201ENST00000483963 348 ntBASIC3.46□□□□□ -1.86
RSPO4Q2I0M5 AC004057.1-201ENST00000485827 348 ntBASIC3.46□□□□□ -1.86
RSPO4Q2I0M5 RPS29P20-201ENST00000489592 171 ntBASIC3.46□□□□□ -1.86
RSPO4Q2I0M5 RNU6-267P-201ENST00000516714 103 ntBASIC3.46□□□□□ -1.86
RSPO4Q2I0M5 U4.6-201ENST00000621618 127 ntBASIC3.46□□□□□ -1.86
RSPO4Q2I0M5 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
RSPO4Q2I0M5 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
RSPO4Q2I0M5 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
RSPO4Q2I0M5 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
RSPO4Q2I0M5 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
RSPO4Q2I0M5 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.46□□□□□ -1.86
RSPO4Q2I0M5 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
RSPO4Q2I0M5 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
RSPO4Q2I0M5 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
RSPO4Q2I0M5 Y_RNA.426-201ENST00000384068 113 ntBASIC3.45□□□□□ -1.86
RSPO4Q2I0M5 SNORD61-201ENST00000384252 73 ntBASIC3.45□□□□□ -1.86
RSPO4Q2I0M5 RNA5SP39-201ENST00000411245 120 ntBASIC3.45□□□□□ -1.86
RSPO4Q2I0M5 AC004941.2-201ENST00000427009 228 ntBASIC3.45□□□□□ -1.86
RSPO4Q2I0M5 snoU13.14-201ENST00000459372 104 ntBASIC3.45□□□□□ -1.86
RSPO4Q2I0M5 RNU6-1270P-201ENST00000517128 108 ntBASIC3.45□□□□□ -1.86
RSPO4Q2I0M5 HSPE1P18-201ENST00000517602 280 ntBASIC3.45□□□□□ -1.86
RSPO4Q2I0M5 SUMO2P16-201ENST00000519475 264 ntBASIC3.45□□□□□ -1.86
RSPO4Q2I0M5 AC027419.1-201ENST00000522976 328 ntBASIC3.45□□□□□ -1.86
RSPO4Q2I0M5 AC008011.1-201ENST00000545989 227 ntBASIC3.45□□□□□ -1.86
RSPO4Q2I0M5 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
RSPO4Q2I0M5 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
RSPO4Q2I0M5 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.45□□□□□ -1.86
RSPO4Q2I0M5 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.44□□□□□ -1.86
RSPO4Q2I0M5 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
RSPO4Q2I0M5 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.44□□□□□ -1.86
RSPO4Q2I0M5 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.44□□□□□ -1.86
RSPO4Q2I0M5 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
RSPO4Q2I0M5 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
RSPO4Q2I0M5 MIR448-201ENST00000362131 111 ntBASIC3.44□□□□□ -1.86
RSPO4Q2I0M5 RNU6-888P-201ENST00000363010 101 ntBASIC3.44□□□□□ -1.86
RSPO4Q2I0M5 RNU6-219P-201ENST00000364728 107 ntBASIC3.44□□□□□ -1.86
RSPO4Q2I0M5 Y_RNA.298-201ENST00000364960 107 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 233.8 ms