Protein–RNA interactions for Protein: Q00341

HDLBP, Vigilin, humanhuman

Known RBP Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBPQ00341 MIR26A1-201ENST00000362205 77 ntBASIC3.29□□□□□ -1.88
HDLBPQ00341 SNORD27-201ENST00000363981 72 ntBASIC3.29□□□□□ -1.88
HDLBPQ00341 RNU6-160P-201ENST00000384591 107 ntBASIC3.29□□□□□ -1.88
HDLBPQ00341 BMS1P22-201ENST00000414726 313 ntBASIC3.29□□□□□ -1.88
HDLBPQ00341 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC3.29□□□□□ -1.88
HDLBPQ00341 AC108059.2-201ENST00000434626 151 ntBASIC3.29□□□□□ -1.88
HDLBPQ00341 AC091959.1-201ENST00000495857 238 ntBASIC3.29□□□□□ -1.88
HDLBPQ00341 AC096725.1-201ENST00000514266 313 ntBASIC3.29□□□□□ -1.88
HDLBPQ00341 RNU6-1146P-201ENST00000516282 102 ntBASIC3.29□□□□□ -1.88
HDLBPQ00341 RNU6-856P-201ENST00000516959 98 ntBASIC3.29□□□□□ -1.88
HDLBPQ00341 AC025647.1-201ENST00000517879 253 ntBASIC3.29□□□□□ -1.88
HDLBPQ00341 AC141273.2-201ENST00000618989 130 ntBASIC3.29□□□□□ -1.88
HDLBPQ00341 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
HDLBPQ00341 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.28□□□□□ -1.88
HDLBPQ00341 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
HDLBPQ00341 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
HDLBPQ00341 AC009487.2-201ENST00000420969 6821 ntBASIC3.28□□□□□ -1.88
HDLBPQ00341 RNA5SP68-201ENST00000363885 119 ntBASIC3.28□□□□□ -1.88
HDLBPQ00341 MIR873-201ENST00000401120 77 ntBASIC3.28□□□□□ -1.88
HDLBPQ00341 RNA5SP344-201ENST00000411081 104 ntBASIC3.28□□□□□ -1.88
HDLBPQ00341 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.28□□□□□ -1.88
HDLBPQ00341 RNU6-966P-201ENST00000516479 104 ntBASIC3.28□□□□□ -1.88
HDLBPQ00341 AC087441.2-201ENST00000529141 262 ntBASIC3.28□□□□□ -1.88
HDLBPQ00341 MIR4435-1-201ENST00000582552 80 ntBASIC3.28□□□□□ -1.88
HDLBPQ00341 AL162424.1-201ENST00000602325 221 ntBASIC3.28□□□□□ -1.88
HDLBPQ00341 DEFB117-201ENST00000602356 141 ntBASIC3.28□□□□□ -1.88
HDLBPQ00341 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.28□□□□□ -1.88
HDLBPQ00341 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.89
HDLBPQ00341 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.89
HDLBPQ00341 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.27□□□□□ -1.89
HDLBPQ00341 RNU4-80P-201ENST00000363200 141 ntBASIC3.27□□□□□ -1.89
HDLBPQ00341 RNU6-1318P-201ENST00000365389 103 ntBASIC3.27□□□□□ -1.89
HDLBPQ00341 Y_RNA.361-201ENST00000365515 120 ntBASIC3.27□□□□□ -1.89
HDLBPQ00341 SNORA67.4-201ENST00000384688 142 ntBASIC3.27□□□□□ -1.89
HDLBPQ00341 AL513328.1-201ENST00000446460 224 ntBASIC3.27□□□□□ -1.89
HDLBPQ00341 RNU4-71P-201ENST00000516258 113 ntBASIC3.27□□□□□ -1.89
HDLBPQ00341 RNU6-388P-201ENST00000517012 105 ntBASIC3.27□□□□□ -1.89
HDLBPQ00341 RNU6-389P-201ENST00000517048 105 ntBASIC3.27□□□□□ -1.89
HDLBPQ00341 CYCSP26-201ENST00000534107 320 ntBASIC3.27□□□□□ -1.89
HDLBPQ00341 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3.27□□□□□ -1.89
HDLBPQ00341 MIR3126-201ENST00000577443 74 ntBASIC3.27□□□□□ -1.89
HDLBPQ00341 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.27□□□□□ -1.89
HDLBPQ00341 ZNF861P-201ENST00000588126 639 ntBASIC3.27□□□□□ -1.89
HDLBPQ00341 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HDLBPQ00341 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
HDLBPQ00341 Y_RNA.257-201ENST00000364596 102 ntBASIC3.26□□□□□ -1.89
HDLBPQ00341 Y_RNA.275-201ENST00000364726 110 ntBASIC3.26□□□□□ -1.89
HDLBPQ00341 MIR1253-201ENST00000408273 105 ntBASIC3.26□□□□□ -1.89
HDLBPQ00341 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC3.26□□□□□ -1.89
HDLBPQ00341 RNU1-131P-201ENST00000458943 161 ntBASIC3.26□□□□□ -1.89
HDLBPQ00341 Y_RNA.680-201ENST00000516441 93 ntBASIC3.26□□□□□ -1.89
HDLBPQ00341 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC3.26□□□□□ -1.89
HDLBPQ00341 AC009127.3-201ENST00000570531 403 ntBASIC3.26□□□□□ -1.89
HDLBPQ00341 MIR3668-201ENST00000582138 75 ntBASIC3.26□□□□□ -1.89
HDLBPQ00341 AC090425.1-201ENST00000610007 140 ntBASIC3.26□□□□□ -1.89
HDLBPQ00341 MIR6817-201ENST00000615588 66 ntBASIC3.26□□□□□ -1.89
HDLBPQ00341 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.25□□□□□ -1.89
HDLBPQ00341 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
HDLBPQ00341 RNU1-91P-201ENST00000364746 163 ntBASIC3.25□□□□□ -1.89
HDLBPQ00341 MIR29C-201ENST00000385231 88 ntBASIC3.25□□□□□ -1.89
HDLBPQ00341 MIR181B1-201ENST00000385240 110 ntBASIC3.25□□□□□ -1.89
HDLBPQ00341 HMGN2P35-201ENST00000412164 270 ntBASIC3.25□□□□□ -1.89
HDLBPQ00341 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC3.25□□□□□ -1.89
HDLBPQ00341 SNORD65B-201ENST00000459126 73 ntBASIC3.25□□□□□ -1.89
HDLBPQ00341 AP004217.1-201ENST00000480579 346 ntBASIC3.25□□□□□ -1.89
HDLBPQ00341 RN7SL499P-201ENST00000481141 276 ntBASIC3.25□□□□□ -1.89
HDLBPQ00341 MTND1P19-201ENST00000511780 315 ntBASIC3.25□□□□□ -1.89
HDLBPQ00341 RNA5SP76-201ENST00000516277 87 ntBASIC3.25□□□□□ -1.89
HDLBPQ00341 RNU6-191P-201ENST00000516295 94 ntBASIC3.25□□□□□ -1.89
HDLBPQ00341 RNA5SP282-201ENST00000516355 108 ntBASIC3.25□□□□□ -1.89
HDLBPQ00341 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC3.25□□□□□ -1.89
HDLBPQ00341 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
HDLBPQ00341 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
HDLBPQ00341 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
HDLBPQ00341 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
HDLBPQ00341 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
HDLBPQ00341 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.24□□□□□ -1.89
HDLBPQ00341 VTRNA1-1-201ENST00000363120 99 ntBASIC3.24□□□□□ -1.89
HDLBPQ00341 Y_RNA.277-201ENST00000364754 102 ntBASIC3.24□□□□□ -1.89
HDLBPQ00341 SNORA20B-201ENST00000384220 132 ntBASIC3.24□□□□□ -1.89
HDLBPQ00341 SNORD58.1-201ENST00000391313 66 ntBASIC3.24□□□□□ -1.89
HDLBPQ00341 RNU6ATAC23P-201ENST00000408448 123 ntBASIC3.24□□□□□ -1.89
HDLBPQ00341 RNU2-61P-201ENST00000411069 191 ntBASIC3.24□□□□□ -1.89
HDLBPQ00341 AC003982.1-202ENST00000469928 248 ntBASIC3.24□□□□□ -1.89
HDLBPQ00341 MIR3145-201ENST00000580727 82 ntBASIC3.24□□□□□ -1.89
HDLBPQ00341 MIR6733-201ENST00000635723 61 ntBASIC3.24□□□□□ -1.89
HDLBPQ00341 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
HDLBPQ00341 SNORA27.1-201ENST00000362604 124 ntBASIC3.23□□□□□ -1.89
HDLBPQ00341 SNORA40.19-201ENST00000390846 128 ntBASIC3.23□□□□□ -1.89
HDLBPQ00341 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.23□□□□□ -1.89
HDLBPQ00341 Y_RNA.590-201ENST00000410140 107 ntBASIC3.23□□□□□ -1.89
HDLBPQ00341 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.23□□□□□ -1.89
HDLBPQ00341 RPL23AP7-203ENST00000449021 469 ntBASIC3.23□□□□□ -1.89
HDLBPQ00341 HSPE1P13-201ENST00000451143 297 ntBASIC3.23□□□□□ -1.89
HDLBPQ00341 Y_RNA.679-201ENST00000516416 91 ntBASIC3.23□□□□□ -1.89
HDLBPQ00341 RPL21P9-201ENST00000556149 474 ntBASIC3.23□□□□□ -1.89
HDLBPQ00341 MIR3605-201ENST00000583214 100 ntBASIC3.23□□□□□ -1.89
HDLBPQ00341 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
HDLBPQ00341 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
HDLBPQ00341 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms