Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
YBX1P67809 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
YBX1P67809 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.1□□□□□ -1.91
YBX1P67809 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
YBX1P67809 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.1□□□□□ -1.91
YBX1P67809 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
YBX1P67809 RNA5SP383-201ENST00000362934 120 ntBASIC3.1□□□□□ -1.91
YBX1P67809 RNU6-915P-201ENST00000364943 103 ntBASIC3.1□□□□□ -1.91
YBX1P67809 RNY3P5-201ENST00000384127 102 ntBASIC3.1□□□□□ -1.91
YBX1P67809 RNU6-301P-201ENST00000384277 107 ntBASIC3.1□□□□□ -1.91
YBX1P67809 Y_RNA.525-201ENST00000384570 113 ntBASIC3.1□□□□□ -1.91
YBX1P67809 RPL21P3-201ENST00000395517 478 ntBASIC3.1□□□□□ -1.91
YBX1P67809 MIR873-201ENST00000401120 77 ntBASIC3.1□□□□□ -1.91
YBX1P67809 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC3.1□□□□□ -1.91
YBX1P67809 HSPE1P13-201ENST00000451143 297 ntBASIC3.1□□□□□ -1.91
YBX1P67809 YWHAEP4-201ENST00000505390 198 ntBASIC3.1□□□□□ -1.91
YBX1P67809 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.1□□□□□ -1.91
YBX1P67809 PDCD5P2-201ENST00000507570 312 ntBASIC3.1□□□□□ -1.91
YBX1P67809 RNU6-1337P-201ENST00000516525 95 ntBASIC3.1□□□□□ -1.91
YBX1P67809 RNU6-1098P-201ENST00000516772 96 ntBASIC3.1□□□□□ -1.91
YBX1P67809 AC079598.5-201ENST00000547460 117 ntBASIC3.1□□□□□ -1.91
YBX1P67809 AC090049.2-201ENST00000550377 109 ntBASIC3.1□□□□□ -1.91
YBX1P67809 MIR5680-201ENST00000577577 84 ntBASIC3.1□□□□□ -1.91
YBX1P67809 MIR4325-201ENST00000583049 90 ntBASIC3.1□□□□□ -1.91
YBX1P67809 AC107294.3-201ENST00000609211 526 ntBASIC3.1□□□□□ -1.91
YBX1P67809 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
YBX1P67809 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
YBX1P67809 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
YBX1P67809 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.1□□□□□ -1.91
YBX1P67809 AC091564.4-201ENST00000533934 2194 ntBASIC3.1□□□□□ -1.91
YBX1P67809 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
YBX1P67809 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
YBX1P67809 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
YBX1P67809 PWAR6-201ENST00000552334 4618 ntBASIC3.09□□□□□ -1.91
YBX1P67809 SNORA20B-201ENST00000384220 132 ntBASIC3.09□□□□□ -1.91
YBX1P67809 Y_RNA.563-201ENST00000384707 108 ntBASIC3.09□□□□□ -1.91
YBX1P67809 AL512604.1-201ENST00000404812 257 ntBASIC3.09□□□□□ -1.91
YBX1P67809 AL355796.1-201ENST00000406706 323 ntBASIC3.09□□□□□ -1.91
YBX1P67809 SNORA79-201ENST00000408376 140 ntBASIC3.09□□□□□ -1.91
YBX1P67809 RNU4-43P-201ENST00000410628 137 ntBASIC3.09□□□□□ -1.91
YBX1P67809 AL121890.1-201ENST00000435457 205 ntBASIC3.09□□□□□ -1.91
YBX1P67809 CST9LP2-201ENST00000437612 320 ntBASIC3.09□□□□□ -1.91
YBX1P67809 RPL23AP7-203ENST00000449021 469 ntBASIC3.09□□□□□ -1.91
YBX1P67809 RN7SL75P-201ENST00000461926 281 ntBASIC3.09□□□□□ -1.91
YBX1P67809 AC090142.3-201ENST00000519012 385 ntBASIC3.09□□□□□ -1.91
YBX1P67809 EIF4BP1-201ENST00000554881 351 ntBASIC3.09□□□□□ -1.91
YBX1P67809 POLR3GP1-201ENST00000594073 261 ntBASIC3.09□□□□□ -1.91
YBX1P67809 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.09□□□□□ -1.91
YBX1P67809 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.09□□□□□ -1.91
YBX1P67809 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
YBX1P67809 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.09□□□□□ -1.91
YBX1P67809 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
YBX1P67809 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
YBX1P67809 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
YBX1P67809 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.08□□□□□ -1.92
YBX1P67809 SNORD114-7-201ENST00000362520 77 ntBASIC3.08□□□□□ -1.92
YBX1P67809 SNORD45.3-201ENST00000363836 72 ntBASIC3.08□□□□□ -1.92
YBX1P67809 Y_RNA.251-201ENST00000364551 99 ntBASIC3.08□□□□□ -1.92
YBX1P67809 RNU6-1082P-201ENST00000364574 107 ntBASIC3.08□□□□□ -1.92
YBX1P67809 SNORD116-13-201ENST00000384408 92 ntBASIC3.08□□□□□ -1.92
YBX1P67809 RNU6-429P-201ENST00000384582 108 ntBASIC3.08□□□□□ -1.92
YBX1P67809 AL139095.1-201ENST00000404326 391 ntBASIC3.08□□□□□ -1.92
YBX1P67809 ARF4P2-201ENST00000430209 526 ntBASIC3.08□□□□□ -1.92
YBX1P67809 AL353705.1-201ENST00000433468 480 ntBASIC3.08□□□□□ -1.92
YBX1P67809 SNRPGP8-201ENST00000454064 226 ntBASIC3.08□□□□□ -1.92
YBX1P67809 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC3.08□□□□□ -1.92
YBX1P67809 RNU7-57P-201ENST00000459540 60 ntBASIC3.08□□□□□ -1.92
YBX1P67809 HMGN2P9-201ENST00000476875 229 ntBASIC3.08□□□□□ -1.92
YBX1P67809 AC245166.1-201ENST00000521012 253 ntBASIC3.08□□□□□ -1.92
YBX1P67809 AC008739.2-201ENST00000597006 317 ntBASIC3.08□□□□□ -1.92
YBX1P67809 AP003357.1-201ENST00000604497 148 ntBASIC3.08□□□□□ -1.92
YBX1P67809 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.08□□□□□ -1.92
YBX1P67809 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
YBX1P67809 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.07□□□□□ -1.92
YBX1P67809 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.07□□□□□ -1.92
YBX1P67809 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.07□□□□□ -1.92
YBX1P67809 RNU6-235P-201ENST00000362644 107 ntBASIC3.07□□□□□ -1.92
YBX1P67809 SNORD14D-201ENST00000384390 87 ntBASIC3.07□□□□□ -1.92
YBX1P67809 RNU6-476P-201ENST00000384726 107 ntBASIC3.07□□□□□ -1.92
YBX1P67809 MIR767-201ENST00000390228 109 ntBASIC3.07□□□□□ -1.92
YBX1P67809 Y_RNA.584-201ENST00000391090 114 ntBASIC3.07□□□□□ -1.92
YBX1P67809 RNY4P18-201ENST00000391107 89 ntBASIC3.07□□□□□ -1.92
YBX1P67809 Y_RNA.587-201ENST00000391210 103 ntBASIC3.07□□□□□ -1.92
YBX1P67809 Z98742.2-201ENST00000431564 187 ntBASIC3.07□□□□□ -1.92
YBX1P67809 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.07□□□□□ -1.92
YBX1P67809 RPL23AP54-201ENST00000495129 419 ntBASIC3.07□□□□□ -1.92
YBX1P67809 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.07□□□□□ -1.92
YBX1P67809 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.07□□□□□ -1.92
YBX1P67809 MIR378D2-201ENST00000580636 98 ntBASIC3.07□□□□□ -1.92
YBX1P67809 UBL5P2-201ENST00000583788 219 ntBASIC3.07□□□□□ -1.92
YBX1P67809 uc_338.14-201ENST00000613162 166 ntBASIC3.07□□□□□ -1.92
YBX1P67809 uc_338.25-201ENST00000613756 156 ntBASIC3.07□□□□□ -1.92
YBX1P67809 MIR6129-201ENST00000616087 109 ntBASIC3.07□□□□□ -1.92
YBX1P67809 AC090517.3-201ENST00000625170 141 ntBASIC3.07□□□□□ -1.92
YBX1P67809 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
YBX1P67809 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.07□□□□□ -1.92
YBX1P67809 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
YBX1P67809 CENPCP1-201ENST00000533085 2578 ntBASIC3.06□□□□□ -1.92
YBX1P67809 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.06□□□□□ -1.92
YBX1P67809 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms