Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 MIR618-201ENST00000385287 98 ntBASIC1.09□□□□□ -2.23
PKNOX1P55347 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
PKNOX1P55347 MIR548F1-201ENST00000408667 84 ntBASIC1.09□□□□□ -2.23
PKNOX1P55347 TOMM22P2-201ENST00000430735 237 ntBASIC1.09□□□□□ -2.23
PKNOX1P55347 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.09□□□□□ -2.23
PKNOX1P55347 snoU13.23-201ENST00000458863 104 ntBASIC1.09□□□□□ -2.23
PKNOX1P55347 SNORD65B-201ENST00000459126 73 ntBASIC1.09□□□□□ -2.23
PKNOX1P55347 MTND5P5-201ENST00000503764 376 ntBASIC1.09□□□□□ -2.23
PKNOX1P55347 RNU6-1114P-201ENST00000516022 107 ntBASIC1.09□□□□□ -2.23
PKNOX1P55347 RNU7-99P-201ENST00000516271 62 ntBASIC1.09□□□□□ -2.23
PKNOX1P55347 RNU1-54P-201ENST00000517181 120 ntBASIC1.09□□□□□ -2.23
PKNOX1P55347 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.09□□□□□ -2.23
PKNOX1P55347 AC019288.1-201ENST00000557918 224 ntBASIC1.09□□□□□ -2.23
PKNOX1P55347 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.09□□□□□ -2.23
PKNOX1P55347 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.09□□□□□ -2.24
PKNOX1P55347 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
PKNOX1P55347 RNA5SP327-201ENST00000362494 101 ntBASIC1.08□□□□□ -2.24
PKNOX1P55347 RNU6-1266P-201ENST00000362794 105 ntBASIC1.08□□□□□ -2.24
PKNOX1P55347 RNU5F-3P-201ENST00000363767 117 ntBASIC1.08□□□□□ -2.24
PKNOX1P55347 Y_RNA.473-201ENST00000384333 102 ntBASIC1.08□□□□□ -2.24
PKNOX1P55347 RNU6-1215P-201ENST00000384441 102 ntBASIC1.08□□□□□ -2.24
PKNOX1P55347 RNU6-440P-201ENST00000390882 105 ntBASIC1.08□□□□□ -2.24
PKNOX1P55347 MRPL35P3-201ENST00000421557 364 ntBASIC1.08□□□□□ -2.24
PKNOX1P55347 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.08□□□□□ -2.24
PKNOX1P55347 AC092989.1-201ENST00000481235 277 ntBASIC1.08□□□□□ -2.24
PKNOX1P55347 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.08□□□□□ -2.24
PKNOX1P55347 Y_RNA.683-201ENST00000516508 93 ntBASIC1.08□□□□□ -2.24
PKNOX1P55347 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.08□□□□□ -2.24
PKNOX1P55347 AC004584.2-201ENST00000570407 410 ntBASIC1.08□□□□□ -2.24
PKNOX1P55347 MIR4790-201ENST00000577799 79 ntBASIC1.08□□□□□ -2.24
PKNOX1P55347 MIR5701-3-201ENST00000578890 82 ntBASIC1.08□□□□□ -2.24
PKNOX1P55347 MIR3664-201ENST00000579074 99 ntBASIC1.08□□□□□ -2.24
PKNOX1P55347 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.08□□□□□ -2.24
PKNOX1P55347 MIR5701-1-201ENST00000585138 82 ntBASIC1.08□□□□□ -2.24
PKNOX1P55347 AC125232.2-201ENST00000592457 143 ntBASIC1.08□□□□□ -2.24
PKNOX1P55347 MIR5701-2-201ENST00000615634 82 ntBASIC1.08□□□□□ -2.24
PKNOX1P55347 AL133216.2-202ENST00000634512 349 ntBASIC1.08□□□□□ -2.24
PKNOX1P55347 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.08□□□□□ -2.24
PKNOX1P55347 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.07□□□□□ -2.24
PKNOX1P55347 Y_RNA.106-201ENST00000363189 100 ntBASIC1.07□□□□□ -2.24
PKNOX1P55347 Y_RNA.184-201ENST00000363884 108 ntBASIC1.07□□□□□ -2.24
PKNOX1P55347 MRPL42P3-201ENST00000401492 326 ntBASIC1.07□□□□□ -2.24
PKNOX1P55347 RN7SKP200-201ENST00000410564 320 ntBASIC1.07□□□□□ -2.24
PKNOX1P55347 RNU6-1001P-201ENST00000411265 100 ntBASIC1.07□□□□□ -2.24
PKNOX1P55347 USMG5P1-201ENST00000425964 177 ntBASIC1.07□□□□□ -2.24
PKNOX1P55347 USP9YP16-201ENST00000430287 407 ntBASIC1.07□□□□□ -2.24
PKNOX1P55347 PGBD4P5-201ENST00000445958 426 ntBASIC1.07□□□□□ -2.24
PKNOX1P55347 MRPS10P1-201ENST00000448483 130 ntBASIC1.07□□□□□ -2.24
PKNOX1P55347 USP9YP23-201ENST00000455085 407 ntBASIC1.07□□□□□ -2.24
PKNOX1P55347 AC108210.2-201ENST00000503681 201 ntBASIC1.07□□□□□ -2.24
PKNOX1P55347 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.07□□□□□ -2.24
PKNOX1P55347 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC1.07□□□□□ -2.24
PKNOX1P55347 AC026782.1-201ENST00000512952 449 ntBASIC1.07□□□□□ -2.24
PKNOX1P55347 RNU6-718P-201ENST00000516166 105 ntBASIC1.07□□□□□ -2.24
PKNOX1P55347 Y_RNA.706-201ENST00000516933 99 ntBASIC1.07□□□□□ -2.24
PKNOX1P55347 AC023157.2-201ENST00000540596 141 ntBASIC1.07□□□□□ -2.24
PKNOX1P55347 AC093023.1-201ENST00000547375 507 ntBASIC1.07□□□□□ -2.24
PKNOX1P55347 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC1.07□□□□□ -2.24
PKNOX1P55347 MIR4438-201ENST00000585271 93 ntBASIC1.07□□□□□ -2.24
PKNOX1P55347 AC100812.1-201ENST00000607622 580 ntBASIC1.07□□□□□ -2.24
PKNOX1P55347 AC005014.2-201ENST00000607795 599 ntBASIC1.07□□□□□ -2.24
PKNOX1P55347 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.07□□□□□ -2.24
PKNOX1P55347 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
PKNOX1P55347 MTND5P16-201ENST00000460269 1703 ntBASIC1.06□□□□□ -2.24
PKNOX1P55347 SNORA70.7-201ENST00000384159 133 ntBASIC1.06□□□□□ -2.24
PKNOX1P55347 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
PKNOX1P55347 RPL37P10-201ENST00000412884 288 ntBASIC1.06□□□□□ -2.24
PKNOX1P55347 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.06□□□□□ -2.24
PKNOX1P55347 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.06□□□□□ -2.24
PKNOX1P55347 RNU6-329P-201ENST00000459618 107 ntBASIC1.06□□□□□ -2.24
PKNOX1P55347 OR2A41P-201ENST00000473586 105 ntBASIC1.06□□□□□ -2.24
PKNOX1P55347 AL133373.1-201ENST00000497098 94 ntBASIC1.06□□□□□ -2.24
PKNOX1P55347 Y_RNA.682-201ENST00000516457 100 ntBASIC1.06□□□□□ -2.24
PKNOX1P55347 RNU6-165P-201ENST00000517170 99 ntBASIC1.06□□□□□ -2.24
PKNOX1P55347 AC027419.1-201ENST00000522976 328 ntBASIC1.06□□□□□ -2.24
PKNOX1P55347 APOOP3-201ENST00000536787 586 ntBASIC1.06□□□□□ -2.24
PKNOX1P55347 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.06□□□□□ -2.24
PKNOX1P55347 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.06□□□□□ -2.24
PKNOX1P55347 AC018638.8-201ENST00000588755 281 ntBASIC1.06□□□□□ -2.24
PKNOX1P55347 AC018462.2-201ENST00000605375 395 ntBASIC1.06□□□□□ -2.24
PKNOX1P55347 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.06□□□□□ -2.24
PKNOX1P55347 AC068137.4-201ENST00000638485 296 ntBASIC1.06□□□□□ -2.24
PKNOX1P55347 RNU6-874P-201ENST00000362390 105 ntBASIC1.05□□□□□ -2.24
PKNOX1P55347 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.05□□□□□ -2.24
PKNOX1P55347 AL355796.1-201ENST00000406706 323 ntBASIC1.05□□□□□ -2.24
PKNOX1P55347 AL139396.1-201ENST00000421137 167 ntBASIC1.05□□□□□ -2.24
PKNOX1P55347 EIF1P2-201ENST00000428233 350 ntBASIC1.05□□□□□ -2.24
PKNOX1P55347 AC108667.1-201ENST00000428618 249 ntBASIC1.05□□□□□ -2.24
PKNOX1P55347 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.05□□□□□ -2.24
PKNOX1P55347 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.05□□□□□ -2.24
PKNOX1P55347 AC092991.1-201ENST00000477176 376 ntBASIC1.05□□□□□ -2.24
PKNOX1P55347 AC093852.1-201ENST00000503587 266 ntBASIC1.05□□□□□ -2.24
PKNOX1P55347 AC011352.1-201ENST00000512300 793 ntBASIC1.05□□□□□ -2.24
PKNOX1P55347 RNU6-107P-201ENST00000516643 102 ntBASIC1.05□□□□□ -2.24
PKNOX1P55347 RN7SKP88-201ENST00000516847 250 ntBASIC1.05□□□□□ -2.24
PKNOX1P55347 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.05□□□□□ -2.24
PKNOX1P55347 AC015712.3-201ENST00000559380 164 ntBASIC1.05□□□□□ -2.24
PKNOX1P55347 AL021879.1-201ENST00000611756 288 ntBASIC1.05□□□□□ -2.24
PKNOX1P55347 7SK.8-201ENST00000612110 250 ntBASIC1.05□□□□□ -2.24
PKNOX1P55347 AC093913.1-201ENST00000614178 329 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms