Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 RNA5SP57-201ENST00000459463 123 ntBASIC1.62□□□□□ -2.15
HMGCS2P54868 AC010531.2-201ENST00000465012 153 ntBASIC1.62□□□□□ -2.15
HMGCS2P54868 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.62□□□□□ -2.15
HMGCS2P54868 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.62□□□□□ -2.15
HMGCS2P54868 RNU6-1114P-201ENST00000516022 107 ntBASIC1.62□□□□□ -2.15
HMGCS2P54868 SNORA25.14-201ENST00000516481 132 ntBASIC1.62□□□□□ -2.15
HMGCS2P54868 RNU6-307P-201ENST00000516743 106 ntBASIC1.62□□□□□ -2.15
HMGCS2P54868 RNU6-1198P-201ENST00000516904 67 ntBASIC1.62□□□□□ -2.15
HMGCS2P54868 AC004584.2-201ENST00000570407 410 ntBASIC1.62□□□□□ -2.15
HMGCS2P54868 MIR3169-201ENST00000578032 83 ntBASIC1.62□□□□□ -2.15
HMGCS2P54868 CYP2C61P-201ENST00000604072 290 ntBASIC1.62□□□□□ -2.15
HMGCS2P54868 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.62□□□□□ -2.15
HMGCS2P54868 AC087588.2-201ENST00000617667 426 ntBASIC1.62□□□□□ -2.15
HMGCS2P54868 AC022513.1-201ENST00000624512 117 ntBASIC1.62□□□□□ -2.15
HMGCS2P54868 MTND5P35-201ENST00000557537 1720 ntBASIC1.62□□□□□ -2.15
HMGCS2P54868 RNU1-62P-201ENST00000362599 164 ntBASIC1.61□□□□□ -2.15
HMGCS2P54868 Y_RNA.187-201ENST00000363918 113 ntBASIC1.61□□□□□ -2.15
HMGCS2P54868 RNA5SP493-201ENST00000364115 91 ntBASIC1.61□□□□□ -2.15
HMGCS2P54868 RNA5SP363-201ENST00000365072 115 ntBASIC1.61□□□□□ -2.15
HMGCS2P54868 RNU6-541P-201ENST00000384709 110 ntBASIC1.61□□□□□ -2.15
HMGCS2P54868 Y_RNA.577-201ENST00000384794 101 ntBASIC1.61□□□□□ -2.15
HMGCS2P54868 MIR489-201ENST00000384923 84 ntBASIC1.61□□□□□ -2.15
HMGCS2P54868 RNU11-3P-201ENST00000391111 133 ntBASIC1.61□□□□□ -2.15
HMGCS2P54868 MIR300-201ENST00000401138 83 ntBASIC1.61□□□□□ -2.15
HMGCS2P54868 MIR1283-1-201ENST00000408494 87 ntBASIC1.61□□□□□ -2.15
HMGCS2P54868 MRPS18CP6-201ENST00000423587 223 ntBASIC1.61□□□□□ -2.15
HMGCS2P54868 AC139712.2-201ENST00000424302 339 ntBASIC1.61□□□□□ -2.15
HMGCS2P54868 AC091179.3-201ENST00000474761 144 ntBASIC1.61□□□□□ -2.15
HMGCS2P54868 HMGN2P9-201ENST00000476875 229 ntBASIC1.61□□□□□ -2.15
HMGCS2P54868 AC125232.2-201ENST00000592457 143 ntBASIC1.61□□□□□ -2.15
HMGCS2P54868 AL590240.4-201ENST00000616908 390 ntBASIC1.61□□□□□ -2.15
HMGCS2P54868 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.61□□□□□ -2.15
HMGCS2P54868 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
HMGCS2P54868 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.61□□□□□ -2.15
HMGCS2P54868 RNU1-58P-201ENST00000362413 163 ntBASIC1.6□□□□□ -2.15
HMGCS2P54868 Y_RNA.315-201ENST00000365117 102 ntBASIC1.6□□□□□ -2.15
HMGCS2P54868 Y_RNA.358-201ENST00000365491 99 ntBASIC1.6□□□□□ -2.15
HMGCS2P54868 RNU6-438P-201ENST00000365561 103 ntBASIC1.6□□□□□ -2.15
HMGCS2P54868 RNU6-1040P-201ENST00000383974 107 ntBASIC1.6□□□□□ -2.15
HMGCS2P54868 RNU6-418P-201ENST00000384035 107 ntBASIC1.6□□□□□ -2.15
HMGCS2P54868 MIR597-201ENST00000384968 97 ntBASIC1.6□□□□□ -2.15
HMGCS2P54868 MIR586-201ENST00000385035 97 ntBASIC1.6□□□□□ -2.15
HMGCS2P54868 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
HMGCS2P54868 RNU6-1156P-201ENST00000410365 100 ntBASIC1.6□□□□□ -2.15
HMGCS2P54868 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.6□□□□□ -2.15
HMGCS2P54868 AC092423.1-201ENST00000430165 186 ntBASIC1.6□□□□□ -2.15
HMGCS2P54868 USP9YP16-201ENST00000430287 407 ntBASIC1.6□□□□□ -2.15
HMGCS2P54868 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.6□□□□□ -2.15
HMGCS2P54868 USP9YP23-201ENST00000455085 407 ntBASIC1.6□□□□□ -2.15
HMGCS2P54868 RNU1-131P-201ENST00000458943 161 ntBASIC1.6□□□□□ -2.15
HMGCS2P54868 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.6□□□□□ -2.15
HMGCS2P54868 AC105758.1-201ENST00000506038 399 ntBASIC1.6□□□□□ -2.15
HMGCS2P54868 AC093303.1-201ENST00000514549 295 ntBASIC1.6□□□□□ -2.15
HMGCS2P54868 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.6□□□□□ -2.15
HMGCS2P54868 RNA5SP445-201ENST00000515889 115 ntBASIC1.6□□□□□ -2.15
HMGCS2P54868 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.6□□□□□ -2.15
HMGCS2P54868 AC090617.3-201ENST00000573670 475 ntBASIC1.6□□□□□ -2.15
HMGCS2P54868 MIR3122-201ENST00000577243 73 ntBASIC1.6□□□□□ -2.15
HMGCS2P54868 MIR5695-201ENST00000579717 85 ntBASIC1.6□□□□□ -2.15
HMGCS2P54868 MZT1P2-201ENST00000604387 248 ntBASIC1.6□□□□□ -2.15
HMGCS2P54868 MIR6078-201ENST00000611069 100 ntBASIC1.6□□□□□ -2.15
HMGCS2P54868 AC126177.8-201ENST00000618339 1015 ntBASIC1.6□□□□□ -2.15
HMGCS2P54868 AC104985.2-201ENST00000620598 500 ntBASIC1.6□□□□□ -2.15
HMGCS2P54868 AC008873.1-201ENST00000625051 138 ntBASIC1.6□□□□□ -2.15
HMGCS2P54868 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.6□□□□□ -2.15
HMGCS2P54868 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
HMGCS2P54868 RNU6-1115P-201ENST00000362490 106 ntBASIC1.59□□□□□ -2.15
HMGCS2P54868 Y_RNA.191-201ENST00000363972 113 ntBASIC1.59□□□□□ -2.15
HMGCS2P54868 Y_RNA.463-201ENST00000384271 102 ntBASIC1.59□□□□□ -2.15
HMGCS2P54868 RNU6-1026P-201ENST00000384465 108 ntBASIC1.59□□□□□ -2.15
HMGCS2P54868 MIR329-1-201ENST00000385028 80 ntBASIC1.59□□□□□ -2.15
HMGCS2P54868 MIR320A-201ENST00000385302 82 ntBASIC1.59□□□□□ -2.15
HMGCS2P54868 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
HMGCS2P54868 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.59□□□□□ -2.15
HMGCS2P54868 AC007098.1-201ENST00000420122 367 ntBASIC1.59□□□□□ -2.15
HMGCS2P54868 MTCO2P27-201ENST00000420740 428 ntBASIC1.59□□□□□ -2.15
HMGCS2P54868 RPL31P63-201ENST00000422565 375 ntBASIC1.59□□□□□ -2.15
HMGCS2P54868 AC016717.1-201ENST00000448918 286 ntBASIC1.59□□□□□ -2.15
HMGCS2P54868 MIR2053-201ENST00000459295 91 ntBASIC1.59□□□□□ -2.15
HMGCS2P54868 RNU6-699P-201ENST00000517081 110 ntBASIC1.59□□□□□ -2.15
HMGCS2P54868 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.59□□□□□ -2.15
HMGCS2P54868 AL133255.1-201ENST00000606374 441 ntBASIC1.59□□□□□ -2.15
HMGCS2P54868 AC091925.1-201ENST00000623204 462 ntBASIC1.59□□□□□ -2.15
HMGCS2P54868 AC138305.3-201ENST00000624988 240 ntBASIC1.59□□□□□ -2.15
HMGCS2P54868 RNU6-727P-201ENST00000363592 107 ntBASIC1.58□□□□□ -2.16
HMGCS2P54868 RNU6-280P-201ENST00000364145 104 ntBASIC1.58□□□□□ -2.16
HMGCS2P54868 SNORD87-201ENST00000364849 89 ntBASIC1.58□□□□□ -2.16
HMGCS2P54868 Y_RNA.415-201ENST00000384012 112 ntBASIC1.58□□□□□ -2.16
HMGCS2P54868 Y_RNA.419-201ENST00000384041 102 ntBASIC1.58□□□□□ -2.16
HMGCS2P54868 RNU6-318P-201ENST00000384283 103 ntBASIC1.58□□□□□ -2.16
HMGCS2P54868 RNU6-975P-201ENST00000384296 105 ntBASIC1.58□□□□□ -2.16
HMGCS2P54868 Y_RNA.496-201ENST00000384444 101 ntBASIC1.58□□□□□ -2.16
HMGCS2P54868 RNU6-160P-201ENST00000384591 107 ntBASIC1.58□□□□□ -2.16
HMGCS2P54868 Y_RNA.579-201ENST00000390939 94 ntBASIC1.58□□□□□ -2.16
HMGCS2P54868 MIR320B2-201ENST00000408479 138 ntBASIC1.58□□□□□ -2.16
HMGCS2P54868 RNU6-1001P-201ENST00000411265 100 ntBASIC1.58□□□□□ -2.16
HMGCS2P54868 HSPE1P21-201ENST00000438283 308 ntBASIC1.58□□□□□ -2.16
HMGCS2P54868 AL357134.1-201ENST00000445848 426 ntBASIC1.58□□□□□ -2.16
HMGCS2P54868 CHEK2P4-201ENST00000450340 246 ntBASIC1.58□□□□□ -2.16
HMGCS2P54868 AC007395.1-201ENST00000451333 677 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 429.8 ms