Protein–RNA interactions for Protein: P48066

SLC6A11, Sodium- and chloride-dependent GABA transporter 3, humanhuman

Predictions only

Length 632 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A11P48066 Y_RNA.488-201ENST00000384403 102 ntBASIC3.01□□□□□ -1.93
SLC6A11P48066 RNU6-578P-201ENST00000390980 103 ntBASIC3.01□□□□□ -1.93
SLC6A11P48066 RPL30P4-201ENST00000429309 333 ntBASIC3.01□□□□□ -1.93
SLC6A11P48066 AL121890.1-201ENST00000435457 205 ntBASIC3.01□□□□□ -1.93
SLC6A11P48066 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.01□□□□□ -1.93
SLC6A11P48066 AC016717.1-201ENST00000448918 286 ntBASIC3.01□□□□□ -1.93
SLC6A11P48066 AC108938.1-201ENST00000451204 136 ntBASIC3.01□□□□□ -1.93
SLC6A11P48066 AC245047.8-201ENST00000456455 284 ntBASIC3.01□□□□□ -1.93
SLC6A11P48066 AC005840.1-201ENST00000498412 377 ntBASIC3.01□□□□□ -1.93
SLC6A11P48066 RNA5SP217-201ENST00000515959 91 ntBASIC3.01□□□□□ -1.93
SLC6A11P48066 RNU6-965P-201ENST00000516721 96 ntBASIC3.01□□□□□ -1.93
SLC6A11P48066 SCARNA11.3-201ENST00000517276 130 ntBASIC3.01□□□□□ -1.93
SLC6A11P48066 AC109329.2-201ENST00000519658 482 ntBASIC3.01□□□□□ -1.93
SLC6A11P48066 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC3.01□□□□□ -1.93
SLC6A11P48066 MIR3684-201ENST00000579779 74 ntBASIC3.01□□□□□ -1.93
SLC6A11P48066 AL713866.2-201ENST00000603579 219 ntBASIC3.01□□□□□ -1.93
SLC6A11P48066 snoZ196.1-201ENST00000625269 89 ntBASIC3.01□□□□□ -1.93
SLC6A11P48066 AC068647.2-201ENST00000637380 353 ntBASIC3.01□□□□□ -1.93
SLC6A11P48066 MIR7515-201ENST00000637837 67 ntBASIC3.01□□□□□ -1.93
SLC6A11P48066 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
SLC6A11P48066 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
SLC6A11P48066 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.01□□□□□ -1.93
SLC6A11P48066 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.01□□□□□ -1.93
SLC6A11P48066 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3□□□□□ -1.93
SLC6A11P48066 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
SLC6A11P48066 MIR367-201ENST00000362299 68 ntBASIC3□□□□□ -1.93
SLC6A11P48066 RNU1-72P-201ENST00000362976 153 ntBASIC3□□□□□ -1.93
SLC6A11P48066 RNU6-151P-201ENST00000364158 107 ntBASIC3□□□□□ -1.93
SLC6A11P48066 RNU6-407P-201ENST00000365280 104 ntBASIC3□□□□□ -1.93
SLC6A11P48066 SNORD113-1-201ENST00000365321 69 ntBASIC3□□□□□ -1.93
SLC6A11P48066 Y_RNA.400-201ENST00000383963 111 ntBASIC3□□□□□ -1.93
SLC6A11P48066 SNORA20B-201ENST00000384220 132 ntBASIC3□□□□□ -1.93
SLC6A11P48066 MIR873-201ENST00000401120 77 ntBASIC3□□□□□ -1.93
SLC6A11P48066 AL355796.1-201ENST00000406706 323 ntBASIC3□□□□□ -1.93
SLC6A11P48066 RN7SKP284-201ENST00000411002 343 ntBASIC3□□□□□ -1.93
SLC6A11P48066 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3□□□□□ -1.93
SLC6A11P48066 EBAG9P1-201ENST00000418955 543 ntBASIC3□□□□□ -1.93
SLC6A11P48066 RPL23AP7-203ENST00000449021 469 ntBASIC3□□□□□ -1.93
SLC6A11P48066 RN7SL429P-201ENST00000479090 223 ntBASIC3□□□□□ -1.93
SLC6A11P48066 RN7SL489P-201ENST00000486185 223 ntBASIC3□□□□□ -1.93
SLC6A11P48066 RN7SL327P-201ENST00000488659 223 ntBASIC3□□□□□ -1.93
SLC6A11P48066 SNORD116-25-201ENST00000516517 92 ntBASIC3□□□□□ -1.93
SLC6A11P48066 RNU6-453P-201ENST00000516819 85 ntBASIC3□□□□□ -1.93
SLC6A11P48066 MIR548AI-201ENST00000579940 88 ntBASIC3□□□□□ -1.93
SLC6A11P48066 RN7SL853P-201ENST00000617250 223 ntBASIC3□□□□□ -1.93
SLC6A11P48066 AC091895.1-201ENST00000624494 256 ntBASIC3□□□□□ -1.93
SLC6A11P48066 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
SLC6A11P48066 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
SLC6A11P48066 AP003122.5-201ENST00000527668 3766 ntBASIC3□□□□□ -1.93
SLC6A11P48066 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3□□□□□ -1.93
SLC6A11P48066 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
SLC6A11P48066 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
SLC6A11P48066 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
SLC6A11P48066 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
SLC6A11P48066 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.99□□□□□ -1.93
SLC6A11P48066 MAPK10-322ENST00000641485 4530 ntBASIC2.99□□□□□ -1.93
SLC6A11P48066 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
SLC6A11P48066 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
SLC6A11P48066 MIR449A-201ENST00000362113 91 ntBASIC2.99□□□□□ -1.93
SLC6A11P48066 Y_RNA.497-201ENST00000384447 98 ntBASIC2.99□□□□□ -1.93
SLC6A11P48066 MIR518C-201ENST00000384822 101 ntBASIC2.99□□□□□ -1.93
SLC6A11P48066 RPL32P35-201ENST00000415214 394 ntBASIC2.99□□□□□ -1.93
SLC6A11P48066 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.99□□□□□ -1.93
SLC6A11P48066 AC105272.1-201ENST00000438604 198 ntBASIC2.99□□□□□ -1.93
SLC6A11P48066 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.99□□□□□ -1.93
SLC6A11P48066 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC2.99□□□□□ -1.93
SLC6A11P48066 AC010409.1-201ENST00000487382 476 ntBASIC2.99□□□□□ -1.93
SLC6A11P48066 AC117454.1-201ENST00000491120 168 ntBASIC2.99□□□□□ -1.93
SLC6A11P48066 RNU6-1337P-201ENST00000516525 95 ntBASIC2.99□□□□□ -1.93
SLC6A11P48066 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC2.99□□□□□ -1.93
SLC6A11P48066 AC079600.2-201ENST00000550076 130 ntBASIC2.99□□□□□ -1.93
SLC6A11P48066 MIR4319-201ENST00000577285 85 ntBASIC2.99□□□□□ -1.93
SLC6A11P48066 AC090616.3-201ENST00000582184 217 ntBASIC2.99□□□□□ -1.93
SLC6A11P48066 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SLC6A11P48066 Y_RNA.215-201ENST00000364204 112 ntBASIC2.98□□□□□ -1.93
SLC6A11P48066 RNU6-438P-201ENST00000365561 103 ntBASIC2.98□□□□□ -1.93
SLC6A11P48066 RNU6-301P-201ENST00000384277 107 ntBASIC2.98□□□□□ -1.93
SLC6A11P48066 RNU6-975P-201ENST00000384296 105 ntBASIC2.98□□□□□ -1.93
SLC6A11P48066 RNU6-239P-201ENST00000390990 99 ntBASIC2.98□□□□□ -1.93
SLC6A11P48066 RNU6-1328P-201ENST00000410938 106 ntBASIC2.98□□□□□ -1.93
SLC6A11P48066 AC090515.1-201ENST00000465295 476 ntBASIC2.98□□□□□ -1.93
SLC6A11P48066 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.98□□□□□ -1.93
SLC6A11P48066 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.98□□□□□ -1.93
SLC6A11P48066 AC245166.1-201ENST00000521012 253 ntBASIC2.98□□□□□ -1.93
SLC6A11P48066 MIR4724-201ENST00000579485 89 ntBASIC2.98□□□□□ -1.93
SLC6A11P48066 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SLC6A11P48066 AC013412.1-201ENST00000610687 192 ntBASIC2.98□□□□□ -1.93
SLC6A11P48066 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.98□□□□□ -1.93
SLC6A11P48066 Y_RNA.778-201ENST00000620203 90 ntBASIC2.98□□□□□ -1.93
SLC6A11P48066 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.98□□□□□ -1.93
SLC6A11P48066 AC009487.2-201ENST00000420969 6821 ntBASIC2.98□□□□□ -1.93
SLC6A11P48066 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SLC6A11P48066 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.98□□□□□ -1.93
SLC6A11P48066 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SLC6A11P48066 MAPK10-362ENST00000641864 4484 ntBASIC2.97□□□□□ -1.93
SLC6A11P48066 RNU6-271P-201ENST00000363858 105 ntBASIC2.97□□□□□ -1.93
SLC6A11P48066 RNU6-818P-201ENST00000364837 108 ntBASIC2.97□□□□□ -1.93
SLC6A11P48066 U8.7-201ENST00000364940 136 ntBASIC2.97□□□□□ -1.93
SLC6A11P48066 SNORD31B-201ENST00000364977 69 ntBASIC2.97□□□□□ -1.93
SLC6A11P48066 SNORD116-13-201ENST00000384408 92 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms