Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 MIR449C-201ENST00000516047 92 ntBASIC2.66□□□□□ -1.98
SLC6A4P31645 RNU2-34P-201ENST00000516534 121 ntBASIC2.66□□□□□ -1.98
SLC6A4P31645 AL590808.1-201ENST00000618696 141 ntBASIC2.66□□□□□ -1.98
SLC6A4P31645 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
SLC6A4P31645 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.65□□□□□ -1.98
SLC6A4P31645 RNU6-545P-201ENST00000362681 104 ntBASIC2.65□□□□□ -1.99
SLC6A4P31645 Y_RNA.65-201ENST00000362846 100 ntBASIC2.65□□□□□ -1.99
SLC6A4P31645 RNU6-438P-201ENST00000365561 103 ntBASIC2.65□□□□□ -1.99
SLC6A4P31645 RNU6-220P-201ENST00000390919 107 ntBASIC2.65□□□□□ -1.99
SLC6A4P31645 RNA5SP210-201ENST00000391034 120 ntBASIC2.65□□□□□ -1.99
SLC6A4P31645 RNU6-710P-201ENST00000410424 105 ntBASIC2.65□□□□□ -1.99
SLC6A4P31645 AC003685.2-201ENST00000422795 395 ntBASIC2.65□□□□□ -1.99
SLC6A4P31645 AL513328.1-201ENST00000446460 224 ntBASIC2.65□□□□□ -1.99
SLC6A4P31645 RN7SL297P-201ENST00000483161 293 ntBASIC2.65□□□□□ -1.99
SLC6A4P31645 RNA5SP320-201ENST00000516263 124 ntBASIC2.65□□□□□ -1.99
SLC6A4P31645 RNU6-826P-201ENST00000516827 104 ntBASIC2.65□□□□□ -1.99
SLC6A4P31645 AL355297.2-201ENST00000604792 129 ntBASIC2.65□□□□□ -1.99
SLC6A4P31645 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.65□□□□□ -1.99
SLC6A4P31645 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.65□□□□□ -1.99
SLC6A4P31645 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.65□□□□□ -1.99
SLC6A4P31645 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.64□□□□□ -1.99
SLC6A4P31645 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.64□□□□□ -1.99
SLC6A4P31645 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.64□□□□□ -1.99
SLC6A4P31645 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
SLC6A4P31645 SNORD114-7-201ENST00000362520 77 ntBASIC2.64□□□□□ -1.99
SLC6A4P31645 Y_RNA.82-201ENST00000363000 102 ntBASIC2.64□□□□□ -1.99
SLC6A4P31645 Y_RNA.92-201ENST00000363043 102 ntBASIC2.64□□□□□ -1.99
SLC6A4P31645 RNU6-324P-201ENST00000363957 106 ntBASIC2.64□□□□□ -1.99
SLC6A4P31645 Y_RNA.235-201ENST00000364412 102 ntBASIC2.64□□□□□ -1.99
SLC6A4P31645 Y_RNA.306-201ENST00000365015 102 ntBASIC2.64□□□□□ -1.99
SLC6A4P31645 Y_RNA.312-201ENST00000365089 102 ntBASIC2.64□□□□□ -1.99
SLC6A4P31645 Y_RNA.322-201ENST00000365151 102 ntBASIC2.64□□□□□ -1.99
SLC6A4P31645 RNU6-975P-201ENST00000384296 105 ntBASIC2.64□□□□□ -1.99
SLC6A4P31645 AC092427.1-202ENST00000430569 476 ntBASIC2.64□□□□□ -1.99
SLC6A4P31645 Y_RNA.650-201ENST00000459002 102 ntBASIC2.64□□□□□ -1.99
SLC6A4P31645 RNU7-57P-201ENST00000459540 60 ntBASIC2.64□□□□□ -1.99
SLC6A4P31645 COX6CP14-201ENST00000469580 174 ntBASIC2.64□□□□□ -1.99
SLC6A4P31645 SNORA70.12-201ENST00000516084 153 ntBASIC2.64□□□□□ -1.99
SLC6A4P31645 RNU6-948P-201ENST00000516374 107 ntBASIC2.64□□□□□ -1.99
SLC6A4P31645 Y_RNA.777-201ENST00000516982 102 ntBASIC2.64□□□□□ -1.99
SLC6A4P31645 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.64□□□□□ -1.99
SLC6A4P31645 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.64□□□□□ -1.99
SLC6A4P31645 Y_RNA.771-201ENST00000598668 102 ntBASIC2.64□□□□□ -1.99
SLC6A4P31645 AL442067.1-201ENST00000613261 223 ntBASIC2.64□□□□□ -1.99
SLC6A4P31645 Y_RNA.789-201ENST00000622480 102 ntBASIC2.64□□□□□ -1.99
SLC6A4P31645 AC135776.4-201ENST00000624300 1904 ntBASIC2.64□□□□□ -1.99
SLC6A4P31645 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.64□□□□□ -1.99
SLC6A4P31645 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
SLC6A4P31645 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
SLC6A4P31645 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
SLC6A4P31645 SNORD115-30-201ENST00000364117 82 ntBASIC2.63□□□□□ -1.99
SLC6A4P31645 RNU6-740P-201ENST00000364734 105 ntBASIC2.63□□□□□ -1.99
SLC6A4P31645 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
SLC6A4P31645 RNU2-61P-201ENST00000411069 191 ntBASIC2.63□□□□□ -1.99
SLC6A4P31645 ATP5EP1-201ENST00000510257 156 ntBASIC2.63□□□□□ -1.99
SLC6A4P31645 RNU6-436P-201ENST00000516171 114 ntBASIC2.63□□□□□ -1.99
SLC6A4P31645 RNA5SP490-201ENST00000517141 136 ntBASIC2.63□□□□□ -1.99
SLC6A4P31645 RN7SKP40-201ENST00000517211 242 ntBASIC2.63□□□□□ -1.99
SLC6A4P31645 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.63□□□□□ -1.99
SLC6A4P31645 MIR3117-201ENST00000584034 78 ntBASIC2.63□□□□□ -1.99
SLC6A4P31645 AC005828.6-201ENST00000606610 232 ntBASIC2.63□□□□□ -1.99
SLC6A4P31645 snoZ196.1-201ENST00000625269 89 ntBASIC2.63□□□□□ -1.99
SLC6A4P31645 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
SLC6A4P31645 Z82195.2-201ENST00000612348 18351 ntBASIC2.62□□□□□ -1.99
SLC6A4P31645 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.62□□□□□ -1.99
SLC6A4P31645 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
SLC6A4P31645 AL159152.1-201ENST00000635019 2587 ntBASIC2.62□□□□□ -1.99
SLC6A4P31645 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.62□□□□□ -1.99
SLC6A4P31645 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
SLC6A4P31645 Y_RNA.200-201ENST00000364018 102 ntBASIC2.62□□□□□ -1.99
SLC6A4P31645 Y_RNA.269-201ENST00000364685 89 ntBASIC2.62□□□□□ -1.99
SLC6A4P31645 Y_RNA.329-201ENST00000365209 107 ntBASIC2.62□□□□□ -1.99
SLC6A4P31645 Y_RNA.361-201ENST00000365515 120 ntBASIC2.62□□□□□ -1.99
SLC6A4P31645 Y_RNA.785-201ENST00000384290 109 ntBASIC2.62□□□□□ -1.99
SLC6A4P31645 RNU6-1235P-201ENST00000384559 107 ntBASIC2.62□□□□□ -1.99
SLC6A4P31645 MIR518C-201ENST00000384822 101 ntBASIC2.62□□□□□ -1.99
SLC6A4P31645 AL031003.1-201ENST00000404229 172 ntBASIC2.62□□□□□ -1.99
SLC6A4P31645 Y_RNA.590-201ENST00000410140 107 ntBASIC2.62□□□□□ -1.99
SLC6A4P31645 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.62□□□□□ -1.99
SLC6A4P31645 AL445687.1-201ENST00000439946 251 ntBASIC2.62□□□□□ -1.99
SLC6A4P31645 RNU6-498P-201ENST00000459468 107 ntBASIC2.62□□□□□ -1.99
SLC6A4P31645 RNU6-221P-201ENST00000459541 99 ntBASIC2.62□□□□□ -1.99
SLC6A4P31645 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.62□□□□□ -1.99
SLC6A4P31645 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.62□□□□□ -1.99
SLC6A4P31645 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
SLC6A4P31645 RNU6-191P-201ENST00000516295 94 ntBASIC2.62□□□□□ -1.99
SLC6A4P31645 Y_RNA.679-201ENST00000516416 91 ntBASIC2.62□□□□□ -1.99
SLC6A4P31645 RNU6-966P-201ENST00000516479 104 ntBASIC2.62□□□□□ -1.99
SLC6A4P31645 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.62□□□□□ -1.99
SLC6A4P31645 AC090616.3-201ENST00000582184 217 ntBASIC2.62□□□□□ -1.99
SLC6A4P31645 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.62□□□□□ -1.99
SLC6A4P31645 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.62□□□□□ -1.99
SLC6A4P31645 U4atac.1-201ENST00000618345 95 ntBASIC2.62□□□□□ -1.99
SLC6A4P31645 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.62□□□□□ -1.99
SLC6A4P31645 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
SLC6A4P31645 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
SLC6A4P31645 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.62□□□□□ -1.99
SLC6A4P31645 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
SLC6A4P31645 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.61□□□□□ -1.99
SLC6A4P31645 RNU4-80P-201ENST00000363200 141 ntBASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms