Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 RNU2-12P-201ENST00000517216 168 ntBASIC2.81□□□□□ -1.96
CNGA1P29973 RNU1-104P-201ENST00000517280 175 ntBASIC2.81□□□□□ -1.96
CNGA1P29973 AC021269.2-201ENST00000532318 330 ntBASIC2.81□□□□□ -1.96
CNGA1P29973 DEFB122-202ENST00000569013 197 ntBASIC2.81□□□□□ -1.96
CNGA1P29973 MIR4446-201ENST00000578505 67 ntBASIC2.81□□□□□ -1.96
CNGA1P29973 AL049779.4-201ENST00000604500 156 ntBASIC2.81□□□□□ -1.96
CNGA1P29973 AC022441.3-201ENST00000605737 136 ntBASIC2.81□□□□□ -1.96
CNGA1P29973 AC245884.12-201ENST00000615364 59 ntBASIC2.81□□□□□ -1.96
CNGA1P29973 FO624990.1-201ENST00000636373 85 ntBASIC2.81□□□□□ -1.96
CNGA1P29973 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CNGA1P29973 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.81□□□□□ -1.96
CNGA1P29973 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.8□□□□□ -1.96
CNGA1P29973 MIR6073-201ENST00000352083 89 ntBASIC2.8□□□□□ -1.96
CNGA1P29973 SNORD115-3-201ENST00000363100 82 ntBASIC2.8□□□□□ -1.96
CNGA1P29973 Y_RNA.133-201ENST00000363428 110 ntBASIC2.8□□□□□ -1.96
CNGA1P29973 RNA5SP493-201ENST00000364115 91 ntBASIC2.8□□□□□ -1.96
CNGA1P29973 RNU6-1175P-201ENST00000365200 107 ntBASIC2.8□□□□□ -1.96
CNGA1P29973 snosnR66.1-201ENST00000391095 99 ntBASIC2.8□□□□□ -1.96
CNGA1P29973 RNU2-20P-201ENST00000410425 191 ntBASIC2.8□□□□□ -1.96
CNGA1P29973 RNA5SP270-201ENST00000411361 118 ntBASIC2.8□□□□□ -1.96
CNGA1P29973 AL356320.1-201ENST00000429616 163 ntBASIC2.8□□□□□ -1.96
CNGA1P29973 AL731563.1-201ENST00000442202 214 ntBASIC2.8□□□□□ -1.96
CNGA1P29973 LINC01399-202ENST00000458450 244 ntBASIC2.8□□□□□ -1.96
CNGA1P29973 RNY3P15-201ENST00000516297 97 ntBASIC2.8□□□□□ -1.96
CNGA1P29973 MIR3169-201ENST00000578032 83 ntBASIC2.8□□□□□ -1.96
CNGA1P29973 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.8□□□□□ -1.96
CNGA1P29973 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CNGA1P29973 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.79□□□□□ -1.96
CNGA1P29973 RNU1-58P-201ENST00000362413 163 ntBASIC2.79□□□□□ -1.96
CNGA1P29973 Y_RNA.19-201ENST00000362462 99 ntBASIC2.79□□□□□ -1.96
CNGA1P29973 Y_RNA.26-201ENST00000362539 101 ntBASIC2.79□□□□□ -1.96
CNGA1P29973 RNU6-1309P-201ENST00000363305 108 ntBASIC2.79□□□□□ -1.96
CNGA1P29973 RNU6-806P-201ENST00000365147 105 ntBASIC2.79□□□□□ -1.96
CNGA1P29973 MIR518A2-201ENST00000384966 87 ntBASIC2.79□□□□□ -1.96
CNGA1P29973 MIR764-201ENST00000390811 85 ntBASIC2.79□□□□□ -1.96
CNGA1P29973 AL359511.1-201ENST00000402970 211 ntBASIC2.79□□□□□ -1.96
CNGA1P29973 RNU2-54P-201ENST00000410299 190 ntBASIC2.79□□□□□ -1.96
CNGA1P29973 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.79□□□□□ -1.96
CNGA1P29973 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC2.79□□□□□ -1.96
CNGA1P29973 AL353689.1-201ENST00000438895 199 ntBASIC2.79□□□□□ -1.96
CNGA1P29973 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CNGA1P29973 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.79□□□□□ -1.96
CNGA1P29973 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.79□□□□□ -1.96
CNGA1P29973 RNA5SP281-201ENST00000516504 135 ntBASIC2.79□□□□□ -1.96
CNGA1P29973 RNU6-635P-201ENST00000516651 102 ntBASIC2.79□□□□□ -1.96
CNGA1P29973 AL159152.1-201ENST00000635019 2587 ntBASIC2.78□□□□□ -1.96
CNGA1P29973 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CNGA1P29973 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CNGA1P29973 RNU1-138P-201ENST00000384093 164 ntBASIC2.78□□□□□ -1.96
CNGA1P29973 MIR1283-2-201ENST00000408621 87 ntBASIC2.78□□□□□ -1.96
CNGA1P29973 RNU6-1199P-201ENST00000411249 104 ntBASIC2.78□□□□□ -1.96
CNGA1P29973 AC060773.1-201ENST00000421698 310 ntBASIC2.78□□□□□ -1.96
CNGA1P29973 BX510359.4-201ENST00000423750 193 ntBASIC2.78□□□□□ -1.96
CNGA1P29973 RNU6-966P-201ENST00000516479 104 ntBASIC2.78□□□□□ -1.96
CNGA1P29973 MIR3684-201ENST00000579779 74 ntBASIC2.78□□□□□ -1.96
CNGA1P29973 AC005828.6-201ENST00000606610 232 ntBASIC2.78□□□□□ -1.96
CNGA1P29973 AC011373.1-201ENST00000607270 237 ntBASIC2.78□□□□□ -1.96
CNGA1P29973 AC046143.2-201ENST00000609789 160 ntBASIC2.78□□□□□ -1.96
CNGA1P29973 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.78□□□□□ -1.96
CNGA1P29973 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CNGA1P29973 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.77□□□□□ -1.97
CNGA1P29973 RNU6-23P-201ENST00000363283 107 ntBASIC2.77□□□□□ -1.97
CNGA1P29973 Y_RNA.243-201ENST00000364481 109 ntBASIC2.77□□□□□ -1.97
CNGA1P29973 Y_RNA.446-201ENST00000384178 104 ntBASIC2.77□□□□□ -1.97
CNGA1P29973 Y_RNA.574-201ENST00000384766 95 ntBASIC2.77□□□□□ -1.97
CNGA1P29973 RNA5SP181-201ENST00000410246 98 ntBASIC2.77□□□□□ -1.97
CNGA1P29973 HMGN2P3-201ENST00000433603 273 ntBASIC2.77□□□□□ -1.97
CNGA1P29973 HMGN2P5-201ENST00000436882 273 ntBASIC2.77□□□□□ -1.97
CNGA1P29973 AC005042.3-201ENST00000453230 174 ntBASIC2.77□□□□□ -1.97
CNGA1P29973 RNU7-193P-201ENST00000516723 65 ntBASIC2.77□□□□□ -1.97
CNGA1P29973 SNORA31.25-201ENST00000517242 134 ntBASIC2.77□□□□□ -1.97
CNGA1P29973 AC008269.2-201ENST00000561915 1105 ntBASIC2.77□□□□□ -1.97
CNGA1P29973 MIR5194-201ENST00000582634 120 ntBASIC2.77□□□□□ -1.97
CNGA1P29973 MIR5092-201ENST00000583139 88 ntBASIC2.77□□□□□ -1.97
CNGA1P29973 AL162730.1-201ENST00000605734 292 ntBASIC2.77□□□□□ -1.97
CNGA1P29973 U2.15-201ENST00000611544 191 ntBASIC2.77□□□□□ -1.97
CNGA1P29973 U2.16-201ENST00000613119 191 ntBASIC2.77□□□□□ -1.97
CNGA1P29973 U2.12-201ENST00000613778 191 ntBASIC2.77□□□□□ -1.97
CNGA1P29973 U2.20-201ENST00000613956 192 ntBASIC2.77□□□□□ -1.97
CNGA1P29973 U2.9-201ENST00000615427 191 ntBASIC2.77□□□□□ -1.97
CNGA1P29973 U2.11-201ENST00000616345 191 ntBASIC2.77□□□□□ -1.97
CNGA1P29973 U2.2-201ENST00000616535 191 ntBASIC2.77□□□□□ -1.97
CNGA1P29973 U2.3-201ENST00000617785 191 ntBASIC2.77□□□□□ -1.97
CNGA1P29973 U2.19-201ENST00000618602 191 ntBASIC2.77□□□□□ -1.97
CNGA1P29973 RNU2-1-201ENST00000618664 191 ntBASIC2.77□□□□□ -1.97
CNGA1P29973 U2.6-201ENST00000619225 191 ntBASIC2.77□□□□□ -1.97
CNGA1P29973 U2.5-201ENST00000619465 191 ntBASIC2.77□□□□□ -1.97
CNGA1P29973 U2.10-201ENST00000620268 191 ntBASIC2.77□□□□□ -1.97
CNGA1P29973 AC006001.4-201ENST00000622243 395 ntBASIC2.77□□□□□ -1.97
CNGA1P29973 MIR6873-201ENST00000622788 63 ntBASIC2.77□□□□□ -1.97
CNGA1P29973 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.77□□□□□ -1.97
CNGA1P29973 U6.115-201ENST00000636045 103 ntBASIC2.77□□□□□ -1.97
CNGA1P29973 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.77□□□□□ -1.97
CNGA1P29973 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CNGA1P29973 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
CNGA1P29973 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CNGA1P29973 RNU6-1266P-201ENST00000362794 105 ntBASIC2.76□□□□□ -1.97
CNGA1P29973 Y_RNA.64-201ENST00000362845 102 ntBASIC2.76□□□□□ -1.97
CNGA1P29973 RNU6-1240P-201ENST00000365155 104 ntBASIC2.76□□□□□ -1.97
CNGA1P29973 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 339.4 ms