Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.79□□□□□ -1.8
RFX1P22670 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RFX1P22670 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
RFX1P22670 SNORD9-201ENST00000362566 104 ntBASIC3.79□□□□□ -1.8
RFX1P22670 RNU6-674P-201ENST00000363831 107 ntBASIC3.79□□□□□ -1.8
RFX1P22670 RNU6-151P-201ENST00000364158 107 ntBASIC3.79□□□□□ -1.8
RFX1P22670 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.79□□□□□ -1.8
RFX1P22670 CYCSP4-201ENST00000429682 331 ntBASIC3.79□□□□□ -1.8
RFX1P22670 AL162725.1-201ENST00000435405 301 ntBASIC3.79□□□□□ -1.8
RFX1P22670 RPL23AP67-201ENST00000465341 474 ntBASIC3.79□□□□□ -1.8
RFX1P22670 AC021205.2-201ENST00000480069 347 ntBASIC3.79□□□□□ -1.8
RFX1P22670 AC107027.2-201ENST00000512197 115 ntBASIC3.79□□□□□ -1.8
RFX1P22670 RPL23AP94-201ENST00000512518 302 ntBASIC3.79□□□□□ -1.8
RFX1P22670 NDUFA5P6-201ENST00000542110 379 ntBASIC3.79□□□□□ -1.8
RFX1P22670 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC3.79□□□□□ -1.8
RFX1P22670 U2.20-201ENST00000613956 192 ntBASIC3.79□□□□□ -1.8
RFX1P22670 MIR6852-201ENST00000621699 66 ntBASIC3.79□□□□□ -1.8
RFX1P22670 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RFX1P22670 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RFX1P22670 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RFX1P22670 Z83843.1-201ENST00000604070 3685 ntBASIC3.79□□□□□ -1.8
RFX1P22670 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
RFX1P22670 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.78□□□□□ -1.8
RFX1P22670 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
RFX1P22670 Y_RNA.497-201ENST00000384447 98 ntBASIC3.78□□□□□ -1.8
RFX1P22670 RNU6-376P-201ENST00000384731 106 ntBASIC3.78□□□□□ -1.8
RFX1P22670 Y_RNA.568-201ENST00000384742 113 ntBASIC3.78□□□□□ -1.8
RFX1P22670 RNU6-131P-201ENST00000391144 107 ntBASIC3.78□□□□□ -1.8
RFX1P22670 AL606845.1-201ENST00000404881 255 ntBASIC3.78□□□□□ -1.8
RFX1P22670 RN7SKP111-201ENST00000410349 271 ntBASIC3.78□□□□□ -1.8
RFX1P22670 RNA5SP511-201ENST00000410487 115 ntBASIC3.78□□□□□ -1.8
RFX1P22670 RN7SL330P-201ENST00000469709 307 ntBASIC3.78□□□□□ -1.8
RFX1P22670 AC018868.1-201ENST00000491307 315 ntBASIC3.78□□□□□ -1.8
RFX1P22670 AC091826.1-201ENST00000514065 313 ntBASIC3.78□□□□□ -1.8
RFX1P22670 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC3.78□□□□□ -1.8
RFX1P22670 MIR3124-201ENST00000582636 67 ntBASIC3.78□□□□□ -1.8
RFX1P22670 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.78□□□□□ -1.8
RFX1P22670 AL356274.2-201ENST00000624379 3752 ntBASIC3.78□□□□□ -1.8
RFX1P22670 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
RFX1P22670 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
RFX1P22670 MIR340-201ENST00000362125 95 ntBASIC3.77□□□□□ -1.81
RFX1P22670 RNU1-33P-201ENST00000364249 162 ntBASIC3.77□□□□□ -1.81
RFX1P22670 RNU6-818P-201ENST00000364837 108 ntBASIC3.77□□□□□ -1.81
RFX1P22670 MIR181A2-201ENST00000384863 110 ntBASIC3.77□□□□□ -1.81
RFX1P22670 MIR184-201ENST00000384962 84 ntBASIC3.77□□□□□ -1.81
RFX1P22670 SRIP3-201ENST00000413200 219 ntBASIC3.77□□□□□ -1.81
RFX1P22670 AL513477.1-202ENST00000417061 214 ntBASIC3.77□□□□□ -1.81
RFX1P22670 AL121914.1-201ENST00000450188 156 ntBASIC3.77□□□□□ -1.81
RFX1P22670 RPS27P22-201ENST00000478056 241 ntBASIC3.77□□□□□ -1.81
RFX1P22670 RNU6-991P-201ENST00000516168 107 ntBASIC3.77□□□□□ -1.81
RFX1P22670 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC3.77□□□□□ -1.81
RFX1P22670 MIR3117-201ENST00000584034 78 ntBASIC3.77□□□□□ -1.81
RFX1P22670 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
RFX1P22670 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
RFX1P22670 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.76□□□□□ -1.81
RFX1P22670 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
RFX1P22670 RNU1-22P-201ENST00000363334 158 ntBASIC3.76□□□□□ -1.81
RFX1P22670 Y_RNA.291-201ENST00000364886 113 ntBASIC3.76□□□□□ -1.81
RFX1P22670 RNA5SP496-201ENST00000391240 109 ntBASIC3.76□□□□□ -1.81
RFX1P22670 AC115115.1-201ENST00000449927 248 ntBASIC3.76□□□□□ -1.81
RFX1P22670 RNU6-437P-201ENST00000459408 95 ntBASIC3.76□□□□□ -1.81
RFX1P22670 UBE2DNL-203ENST00000474922 222 ntBASIC3.76□□□□□ -1.81
RFX1P22670 AC006483.1-201ENST00000487308 313 ntBASIC3.76□□□□□ -1.81
RFX1P22670 RPL23AP54-201ENST00000495129 419 ntBASIC3.76□□□□□ -1.81
RFX1P22670 RNU6-1146P-201ENST00000516282 102 ntBASIC3.76□□□□□ -1.81
RFX1P22670 AC107934.2-201ENST00000518653 310 ntBASIC3.76□□□□□ -1.81
RFX1P22670 AC015720.1-201ENST00000565251 277 ntBASIC3.76□□□□□ -1.81
RFX1P22670 U4atac.1-201ENST00000618345 95 ntBASIC3.76□□□□□ -1.81
RFX1P22670 AC012640.5-201ENST00000623897 319 ntBASIC3.76□□□□□ -1.81
RFX1P22670 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.76□□□□□ -1.81
RFX1P22670 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.76□□□□□ -1.81
RFX1P22670 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
RFX1P22670 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.76□□□□□ -1.81
RFX1P22670 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.76□□□□□ -1.81
RFX1P22670 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
RFX1P22670 SNORA72-201ENST00000384339 132 ntBASIC3.75□□□□□ -1.81
RFX1P22670 SNORA48.8-201ENST00000391324 134 ntBASIC3.75□□□□□ -1.81
RFX1P22670 MIR1278-201ENST00000408753 81 ntBASIC3.75□□□□□ -1.81
RFX1P22670 AC005326.1-201ENST00000429197 123 ntBASIC3.75□□□□□ -1.81
RFX1P22670 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.75□□□□□ -1.81
RFX1P22670 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC3.75□□□□□ -1.81
RFX1P22670 AC097462.1-201ENST00000514125 324 ntBASIC3.75□□□□□ -1.81
RFX1P22670 RNU6-561P-201ENST00000516222 102 ntBASIC3.75□□□□□ -1.81
RFX1P22670 RNU6-667P-201ENST00000517186 102 ntBASIC3.75□□□□□ -1.81
RFX1P22670 AL162274.2-201ENST00000614406 332 ntBASIC3.75□□□□□ -1.81
RFX1P22670 U6.73-201ENST00000619194 103 ntBASIC3.75□□□□□ -1.81
RFX1P22670 MIR8057-201ENST00000620957 69 ntBASIC3.75□□□□□ -1.81
RFX1P22670 AC017071.1-201ENST00000564407 2204 ntBASIC3.75□□□□□ -1.81
RFX1P22670 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.75□□□□□ -1.81
RFX1P22670 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
RFX1P22670 Y_RNA.337-201ENST00000365312 102 ntBASIC3.74□□□□□ -1.81
RFX1P22670 SNORA25B-201ENST00000365507 128 ntBASIC3.74□□□□□ -1.81
RFX1P22670 MIR592-201ENST00000384959 97 ntBASIC3.74□□□□□ -1.81
RFX1P22670 MIR627-201ENST00000384979 97 ntBASIC3.74□□□□□ -1.81
RFX1P22670 MIR15B-201ENST00000385045 98 ntBASIC3.74□□□□□ -1.81
RFX1P22670 AL353705.1-201ENST00000433468 480 ntBASIC3.74□□□□□ -1.81
RFX1P22670 AC006028.1-201ENST00000438379 402 ntBASIC3.74□□□□□ -1.81
RFX1P22670 AC025518.1-201ENST00000479856 347 ntBASIC3.74□□□□□ -1.81
RFX1P22670 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.74□□□□□ -1.81
RFX1P22670 MIR4438-201ENST00000585271 93 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 135 ms