Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 AC016717.1-201ENST00000448918 286 ntBASIC3.62□□□□□ -1.83
HOXD8P13378 AC083906.5-201ENST00000503722 328 ntBASIC3.62□□□□□ -1.83
HOXD8P13378 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.62□□□□□ -1.83
HOXD8P13378 AC013412.1-201ENST00000610687 192 ntBASIC3.62□□□□□ -1.83
HOXD8P13378 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.62□□□□□ -1.83
HOXD8P13378 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HOXD8P13378 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
HOXD8P13378 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HOXD8P13378 RNU6-1255P-201ENST00000363434 112 ntBASIC3.61□□□□□ -1.83
HOXD8P13378 SNORA22-201ENST00000383907 134 ntBASIC3.61□□□□□ -1.83
HOXD8P13378 RN7SKP101-201ENST00000411376 320 ntBASIC3.61□□□□□ -1.83
HOXD8P13378 AL158823.1-201ENST00000418441 478 ntBASIC3.61□□□□□ -1.83
HOXD8P13378 RPL36AP21-201ENST00000490372 323 ntBASIC3.61□□□□□ -1.83
HOXD8P13378 MRPS36P2-201ENST00000512569 299 ntBASIC3.61□□□□□ -1.83
HOXD8P13378 Y_RNA.709-201ENST00000516952 92 ntBASIC3.61□□□□□ -1.83
HOXD8P13378 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.61□□□□□ -1.83
HOXD8P13378 AC107934.2-201ENST00000518653 310 ntBASIC3.61□□□□□ -1.83
HOXD8P13378 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.61□□□□□ -1.83
HOXD8P13378 MIR4679-2-201ENST00000578358 77 ntBASIC3.61□□□□□ -1.83
HOXD8P13378 uc_338.1-201ENST00000612113 180 ntBASIC3.61□□□□□ -1.83
HOXD8P13378 U6.95-201ENST00000636931 70 ntBASIC3.61□□□□□ -1.83
HOXD8P13378 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HOXD8P13378 AC002546.1-201ENST00000588041 2504 ntBASIC3.6□□□□□ -1.83
HOXD8P13378 SNORA80A-201ENST00000363922 136 ntBASIC3.6□□□□□ -1.83
HOXD8P13378 Y_RNA.309-201ENST00000365046 111 ntBASIC3.6□□□□□ -1.83
HOXD8P13378 RNU6-234P-201ENST00000365229 104 ntBASIC3.6□□□□□ -1.83
HOXD8P13378 RNU6-438P-201ENST00000365561 103 ntBASIC3.6□□□□□ -1.83
HOXD8P13378 RNU6-136P-201ENST00000384663 107 ntBASIC3.6□□□□□ -1.83
HOXD8P13378 MIR1278-201ENST00000408753 81 ntBASIC3.6□□□□□ -1.83
HOXD8P13378 RNU7-170P-201ENST00000459303 61 ntBASIC3.6□□□□□ -1.83
HOXD8P13378 RNU6-221P-201ENST00000459541 99 ntBASIC3.6□□□□□ -1.83
HOXD8P13378 RPS27P22-201ENST00000478056 241 ntBASIC3.6□□□□□ -1.83
HOXD8P13378 AC023043.3-201ENST00000593113 385 ntBASIC3.6□□□□□ -1.83
HOXD8P13378 XIST_intron.1-201ENST00000619444 68 ntBASIC3.6□□□□□ -1.83
HOXD8P13378 5S_rRNA.13-201ENST00000622298 123 ntBASIC3.6□□□□□ -1.83
HOXD8P13378 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
HOXD8P13378 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
HOXD8P13378 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.59□□□□□ -1.83
HOXD8P13378 MIR422A-201ENST00000362286 90 ntBASIC3.59□□□□□ -1.83
HOXD8P13378 U8.1-201ENST00000362843 134 ntBASIC3.59□□□□□ -1.83
HOXD8P13378 RNU6-975P-201ENST00000384296 105 ntBASIC3.59□□□□□ -1.83
HOXD8P13378 SNORA40.5-201ENST00000391061 128 ntBASIC3.59□□□□□ -1.83
HOXD8P13378 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.59□□□□□ -1.83
HOXD8P13378 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.59□□□□□ -1.83
HOXD8P13378 MIR622-201ENST00000638396 96 ntBASIC3.59□□□□□ -1.83
HOXD8P13378 AC091152.2-201ENST00000591628 2569 ntBASIC3.59□□□□□ -1.83
HOXD8P13378 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
HOXD8P13378 Z82209.1-201ENST00000422141 2135 ntBASIC3.59□□□□□ -1.84
HOXD8P13378 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.58□□□□□ -1.84
HOXD8P13378 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HOXD8P13378 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
HOXD8P13378 RNU6-674P-201ENST00000363831 107 ntBASIC3.58□□□□□ -1.84
HOXD8P13378 RNU6-755P-201ENST00000364400 103 ntBASIC3.58□□□□□ -1.84
HOXD8P13378 SNORA44-201ENST00000384584 132 ntBASIC3.58□□□□□ -1.84
HOXD8P13378 RNA5SP511-201ENST00000410487 115 ntBASIC3.58□□□□□ -1.84
HOXD8P13378 RNU2-55P-201ENST00000411146 174 ntBASIC3.58□□□□□ -1.84
HOXD8P13378 AC008134.1-201ENST00000420943 193 ntBASIC3.58□□□□□ -1.84
HOXD8P13378 SNORA31.1-201ENST00000515993 133 ntBASIC3.58□□□□□ -1.84
HOXD8P13378 SNORA31.5-201ENST00000516190 133 ntBASIC3.58□□□□□ -1.84
HOXD8P13378 AC109329.2-201ENST00000519658 482 ntBASIC3.58□□□□□ -1.84
HOXD8P13378 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.58□□□□□ -1.84
HOXD8P13378 MIR4672-201ENST00000583126 81 ntBASIC3.58□□□□□ -1.84
HOXD8P13378 AC104984.5-201ENST00000586878 94 ntBASIC3.58□□□□□ -1.84
HOXD8P13378 AC093732.2-201ENST00000607950 274 ntBASIC3.58□□□□□ -1.84
HOXD8P13378 AL162274.2-201ENST00000614406 332 ntBASIC3.58□□□□□ -1.84
HOXD8P13378 AC006386.2-201ENST00000624491 75 ntBASIC3.58□□□□□ -1.84
HOXD8P13378 AC012005.1-201ENST00000624575 75 ntBASIC3.58□□□□□ -1.84
HOXD8P13378 MIR3914-2-201ENST00000637339 95 ntBASIC3.58□□□□□ -1.84
HOXD8P13378 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.58□□□□□ -1.84
HOXD8P13378 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HOXD8P13378 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.58□□□□□ -1.84
HOXD8P13378 AC138915.1-201ENST00000565427 1685 ntBASIC3.58□□□□□ -1.84
HOXD8P13378 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.58□□□□□ -1.84
HOXD8P13378 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HOXD8P13378 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.57□□□□□ -1.84
HOXD8P13378 RNU6-486P-201ENST00000363116 107 ntBASIC3.57□□□□□ -1.84
HOXD8P13378 SNORA54-201ENST00000384281 123 ntBASIC3.57□□□□□ -1.84
HOXD8P13378 MIR591-201ENST00000385290 95 ntBASIC3.57□□□□□ -1.84
HOXD8P13378 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
HOXD8P13378 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC3.57□□□□□ -1.84
HOXD8P13378 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC3.57□□□□□ -1.84
HOXD8P13378 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.57□□□□□ -1.84
HOXD8P13378 RNU6-948P-201ENST00000516374 107 ntBASIC3.57□□□□□ -1.84
HOXD8P13378 MIR2276-201ENST00000516886 89 ntBASIC3.57□□□□□ -1.84
HOXD8P13378 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.57□□□□□ -1.84
HOXD8P13378 AC103988.1-201ENST00000566382 2177 ntBASIC3.57□□□□□ -1.84
HOXD8P13378 AC006254.2-201ENST00000603259 279 ntBASIC3.57□□□□□ -1.84
HOXD8P13378 AC108081.1-201ENST00000604358 221 ntBASIC3.57□□□□□ -1.84
HOXD8P13378 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
HOXD8P13378 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HOXD8P13378 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HOXD8P13378 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC3.56□□□□□ -1.84
HOXD8P13378 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.56□□□□□ -1.84
HOXD8P13378 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
HOXD8P13378 Y_RNA.120-201ENST00000363304 110 ntBASIC3.56□□□□□ -1.84
HOXD8P13378 RNU6-1083P-201ENST00000384022 107 ntBASIC3.56□□□□□ -1.84
HOXD8P13378 SNORA72-201ENST00000384339 132 ntBASIC3.56□□□□□ -1.84
HOXD8P13378 RNU6-1274P-201ENST00000384557 107 ntBASIC3.56□□□□□ -1.84
HOXD8P13378 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.56□□□□□ -1.84
HOXD8P13378 MLLT10P1-201ENST00000418346 262 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms