Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.28□□□□□ -2.2
RETP07949 AC010531.2-201ENST00000465012 153 ntBASIC1.28□□□□□ -2.2
RETP07949 HMGN1P12-201ENST00000499125 195 ntBASIC1.28□□□□□ -2.2
RETP07949 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.28□□□□□ -2.2
RETP07949 RNU6-1198P-201ENST00000516904 67 ntBASIC1.28□□□□□ -2.2
RETP07949 Y_RNA.708-201ENST00000516950 96 ntBASIC1.28□□□□□ -2.2
RETP07949 RNA5SP54-201ENST00000516951 92 ntBASIC1.28□□□□□ -2.2
RETP07949 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC1.28□□□□□ -2.2
RETP07949 AC068338.1-201ENST00000565567 176 ntBASIC1.28□□□□□ -2.2
RETP07949 MIR5006-201ENST00000583027 110 ntBASIC1.28□□□□□ -2.2
RETP07949 SNRPGP20-201ENST00000604477 205 ntBASIC1.28□□□□□ -2.2
RETP07949 AL355073.2-201ENST00000612106 557 ntBASIC1.28□□□□□ -2.2
RETP07949 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1.28□□□□□ -2.2
RETP07949 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.28□□□□□ -2.2
RETP07949 AC099654.5-201ENST00000636479 350 ntBASIC1.28□□□□□ -2.2
RETP07949 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.28□□□□□ -2.2
RETP07949 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.28□□□□□ -2.2
RETP07949 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
RETP07949 BX322639.1-202ENST00000423987 2213 ntBASIC1.28□□□□□ -2.2
RETP07949 AL159152.1-201ENST00000635019 2587 ntBASIC1.28□□□□□ -2.2
RETP07949 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.27□□□□□ -2.21
RETP07949 Y_RNA.2-201ENST00000362330 96 ntBASIC1.27□□□□□ -2.21
RETP07949 Y_RNA.48-201ENST00000362710 103 ntBASIC1.27□□□□□ -2.21
RETP07949 RNU6-112P-201ENST00000363599 104 ntBASIC1.27□□□□□ -2.21
RETP07949 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
RETP07949 MIR300-201ENST00000401138 83 ntBASIC1.27□□□□□ -2.21
RETP07949 MIR320B2-201ENST00000408479 138 ntBASIC1.27□□□□□ -2.21
RETP07949 Y_RNA.594-201ENST00000410373 140 ntBASIC1.27□□□□□ -2.21
RETP07949 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.27□□□□□ -2.21
RETP07949 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.27□□□□□ -2.21
RETP07949 MTCO3P8-201ENST00000453691 755 ntBASIC1.27□□□□□ -2.21
RETP07949 AC016925.1-201ENST00000458303 298 ntBASIC1.27□□□□□ -2.21
RETP07949 RPL30P10-201ENST00000488148 337 ntBASIC1.27□□□□□ -2.21
RETP07949 RNU7-175P-201ENST00000515915 61 ntBASIC1.27□□□□□ -2.21
RETP07949 RNU6-1041P-201ENST00000516254 102 ntBASIC1.27□□□□□ -2.21
RETP07949 RNU6-58P-201ENST00000517143 103 ntBASIC1.27□□□□□ -2.21
RETP07949 AL590705.4-201ENST00000532209 134 ntBASIC1.27□□□□□ -2.21
RETP07949 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.27□□□□□ -2.21
RETP07949 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.27□□□□□ -2.21
RETP07949 MIR4801-201ENST00000582704 82 ntBASIC1.27□□□□□ -2.21
RETP07949 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.27□□□□□ -2.21
RETP07949 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.27□□□□□ -2.21
RETP07949 AL359697.1-201ENST00000624879 587 ntBASIC1.27□□□□□ -2.21
RETP07949 TPTEP1-208ENST00000636884 213 ntBASIC1.27□□□□□ -2.21
RETP07949 ZNF204P-201ENST00000416749 2397 ntBASIC1.27□□□□□ -2.21
RETP07949 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
RETP07949 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.26□□□□□ -2.21
RETP07949 MTND4P12-201ENST00000498999 1377 ntBASIC1.26□□□□□ -2.21
RETP07949 RNU6-137P-201ENST00000363680 108 ntBASIC1.26□□□□□ -2.21
RETP07949 Y_RNA.319-201ENST00000365138 92 ntBASIC1.26□□□□□ -2.21
RETP07949 RNU6-17P-201ENST00000384245 107 ntBASIC1.26□□□□□ -2.21
RETP07949 RNU6-18P-201ENST00000384527 107 ntBASIC1.26□□□□□ -2.21
RETP07949 RNU6-296P-201ENST00000384608 107 ntBASIC1.26□□□□□ -2.21
RETP07949 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
RETP07949 MTCO1P44-201ENST00000441935 243 ntBASIC1.26□□□□□ -2.21
RETP07949 AC009237.7-201ENST00000447357 229 ntBASIC1.26□□□□□ -2.21
RETP07949 AC016717.1-201ENST00000448918 286 ntBASIC1.26□□□□□ -2.21
RETP07949 Y_RNA.635-201ENST00000459041 101 ntBASIC1.26□□□□□ -2.21
RETP07949 AC099513.1-201ENST00000490423 301 ntBASIC1.26□□□□□ -2.21
RETP07949 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.26□□□□□ -2.21
RETP07949 CBX3P8-201ENST00000532412 525 ntBASIC1.26□□□□□ -2.21
RETP07949 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.26□□□□□ -2.21
RETP07949 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.26□□□□□ -2.21
RETP07949 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.26□□□□□ -2.21
RETP07949 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.26□□□□□ -2.21
RETP07949 AC005730.3-201ENST00000583067 366 ntBASIC1.26□□□□□ -2.21
RETP07949 AC009229.3-201ENST00000608056 282 ntBASIC1.26□□□□□ -2.21
RETP07949 PISRT1.1-201ENST00000616930 107 ntBASIC1.26□□□□□ -2.21
RETP07949 MIR6767-201ENST00000637302 66 ntBASIC1.26□□□□□ -2.21
RETP07949 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
RETP07949 SNORA72.1-201ENST00000363485 129 ntBASIC1.25□□□□□ -2.21
RETP07949 Y_RNA.405-201ENST00000383979 100 ntBASIC1.25□□□□□ -2.21
RETP07949 RNU6-245P-201ENST00000384020 107 ntBASIC1.25□□□□□ -2.21
RETP07949 Y_RNA.451-201ENST00000384200 100 ntBASIC1.25□□□□□ -2.21
RETP07949 Y_RNA.524-201ENST00000384564 100 ntBASIC1.25□□□□□ -2.21
RETP07949 Y_RNA.561-201ENST00000384694 100 ntBASIC1.25□□□□□ -2.21
RETP07949 RNU1-78P-201ENST00000391248 165 ntBASIC1.25□□□□□ -2.21
RETP07949 MIR1283-1-201ENST00000408494 87 ntBASIC1.25□□□□□ -2.21
RETP07949 AC004866.1-201ENST00000411748 78 ntBASIC1.25□□□□□ -2.21
RETP07949 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.25□□□□□ -2.21
RETP07949 AC007395.1-201ENST00000451333 677 ntBASIC1.25□□□□□ -2.21
RETP07949 MTND4P17-201ENST00000470444 350 ntBASIC1.25□□□□□ -2.21
RETP07949 SUMO2P18-201ENST00000518873 252 ntBASIC1.25□□□□□ -2.21
RETP07949 AC134698.4-201ENST00000523451 826 ntBASIC1.25□□□□□ -2.21
RETP07949 AC027288.2-201ENST00000553028 243 ntBASIC1.25□□□□□ -2.21
RETP07949 MIR4753-201ENST00000585119 83 ntBASIC1.25□□□□□ -2.21
RETP07949 UBE2V2P2-201ENST00000587677 504 ntBASIC1.25□□□□□ -2.21
RETP07949 AC005014.2-201ENST00000607795 599 ntBASIC1.25□□□□□ -2.21
RETP07949 MIR8074-201ENST00000615081 81 ntBASIC1.25□□□□□ -2.21
RETP07949 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.25□□□□□ -2.21
RETP07949 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.25□□□□□ -2.21
RETP07949 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.24□□□□□ -2.21
RETP07949 Y_RNA.132-201ENST00000363421 102 ntBASIC1.24□□□□□ -2.21
RETP07949 Y_RNA.142-201ENST00000363491 102 ntBASIC1.24□□□□□ -2.21
RETP07949 Y_RNA.303-201ENST00000364998 94 ntBASIC1.24□□□□□ -2.21
RETP07949 Y_RNA.404-201ENST00000383978 102 ntBASIC1.24□□□□□ -2.21
RETP07949 RNU6-541P-201ENST00000384709 110 ntBASIC1.24□□□□□ -2.21
RETP07949 RNU6-1105P-201ENST00000384774 107 ntBASIC1.24□□□□□ -2.21
RETP07949 MIR548B-201ENST00000385247 97 ntBASIC1.24□□□□□ -2.21
RETP07949 RNU6-159P-201ENST00000391080 106 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms