Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 RNU6-107P-201ENST00000516643 102 ntBASIC0.93□□□□□ -2.26
HLA-DQA1P01909 AL137100.2-201ENST00000555786 315 ntBASIC0.93□□□□□ -2.26
HLA-DQA1P01909 AC015712.3-201ENST00000559380 164 ntBASIC0.93□□□□□ -2.26
HLA-DQA1P01909 AC018638.8-201ENST00000588755 281 ntBASIC0.93□□□□□ -2.26
HLA-DQA1P01909 AL390123.1-201ENST00000603216 237 ntBASIC0.93□□□□□ -2.26
HLA-DQA1P01909 AL512598.1-201ENST00000610158 273 ntBASIC0.93□□□□□ -2.26
HLA-DQA1P01909 AC007014.2-201ENST00000615581 479 ntBASIC0.93□□□□□ -2.26
HLA-DQA1P01909 AC002553.4-201ENST00000616896 331 ntBASIC0.93□□□□□ -2.26
HLA-DQA1P01909 AC073869.6-201ENST00000640656 341 ntBASIC0.93□□□□□ -2.26
HLA-DQA1P01909 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC0.93□□□□□ -2.26
HLA-DQA1P01909 AL591704.2-201ENST00000421658 181 ntBASIC0.92□□□□□ -2.26
HLA-DQA1P01909 USMG5P1-201ENST00000425964 177 ntBASIC0.92□□□□□ -2.26
HLA-DQA1P01909 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.92□□□□□ -2.26
HLA-DQA1P01909 AC009474.2-201ENST00000451383 136 ntBASIC0.92□□□□□ -2.26
HLA-DQA1P01909 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC0.92□□□□□ -2.26
HLA-DQA1P01909 RNU7-99P-201ENST00000516271 62 ntBASIC0.92□□□□□ -2.26
HLA-DQA1P01909 Y_RNA.706-201ENST00000516933 99 ntBASIC0.92□□□□□ -2.26
HLA-DQA1P01909 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.92□□□□□ -2.26
HLA-DQA1P01909 AC023157.2-201ENST00000540596 141 ntBASIC0.92□□□□□ -2.26
HLA-DQA1P01909 AC093023.1-201ENST00000547375 507 ntBASIC0.92□□□□□ -2.26
HLA-DQA1P01909 AC022432.1-201ENST00000595739 310 ntBASIC0.92□□□□□ -2.26
HLA-DQA1P01909 AC018462.2-201ENST00000605375 395 ntBASIC0.92□□□□□ -2.26
HLA-DQA1P01909 AC005014.2-201ENST00000607795 599 ntBASIC0.92□□□□□ -2.26
HLA-DQA1P01909 AC040896.1-201ENST00000613819 479 ntBASIC0.92□□□□□ -2.26
HLA-DQA1P01909 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.92□□□□□ -2.26
HLA-DQA1P01909 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.91□□□□□ -2.26
HLA-DQA1P01909 RNA5SP327-201ENST00000362494 101 ntBASIC0.91□□□□□ -2.26
HLA-DQA1P01909 Y_RNA.184-201ENST00000363884 108 ntBASIC0.91□□□□□ -2.26
HLA-DQA1P01909 RNU4-13P-201ENST00000364019 141 ntBASIC0.91□□□□□ -2.26
HLA-DQA1P01909 Y_RNA.490-201ENST00000384413 102 ntBASIC0.91□□□□□ -2.26
HLA-DQA1P01909 RNU6-939P-201ENST00000384634 107 ntBASIC0.91□□□□□ -2.26
HLA-DQA1P01909 RNU1-139P-201ENST00000391307 165 ntBASIC0.91□□□□□ -2.26
HLA-DQA1P01909 MRPL42P3-201ENST00000401492 326 ntBASIC0.91□□□□□ -2.26
HLA-DQA1P01909 MIR1277-201ENST00000408536 78 ntBASIC0.91□□□□□ -2.26
HLA-DQA1P01909 AL139396.1-201ENST00000421137 167 ntBASIC0.91□□□□□ -2.26
HLA-DQA1P01909 SNX2P2-201ENST00000424553 323 ntBASIC0.91□□□□□ -2.26
HLA-DQA1P01909 AC245047.3-201ENST00000429428 127 ntBASIC0.91□□□□□ -2.26
HLA-DQA1P01909 USP9YP16-201ENST00000430287 407 ntBASIC0.91□□□□□ -2.26
HLA-DQA1P01909 TOMM22P2-201ENST00000430735 237 ntBASIC0.91□□□□□ -2.26
HLA-DQA1P01909 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.91□□□□□ -2.26
HLA-DQA1P01909 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.91□□□□□ -2.26
HLA-DQA1P01909 USP9YP23-201ENST00000455085 407 ntBASIC0.91□□□□□ -2.26
HLA-DQA1P01909 AC010469.2-201ENST00000496412 480 ntBASIC0.91□□□□□ -2.26
HLA-DQA1P01909 RNU6-1114P-201ENST00000516022 107 ntBASIC0.91□□□□□ -2.26
HLA-DQA1P01909 Y_RNA.670-201ENST00000516255 105 ntBASIC0.91□□□□□ -2.26
HLA-DQA1P01909 Y_RNA.683-201ENST00000516508 93 ntBASIC0.91□□□□□ -2.26
HLA-DQA1P01909 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.91□□□□□ -2.26
HLA-DQA1P01909 AF235103.2-201ENST00000525753 346 ntBASIC0.91□□□□□ -2.26
HLA-DQA1P01909 AL512310.8-201ENST00000550183 120 ntBASIC0.91□□□□□ -2.26
HLA-DQA1P01909 MIR5701-3-201ENST00000578890 82 ntBASIC0.91□□□□□ -2.26
HLA-DQA1P01909 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC0.91□□□□□ -2.26
HLA-DQA1P01909 MIR5701-1-201ENST00000585138 82 ntBASIC0.91□□□□□ -2.26
HLA-DQA1P01909 AC100812.1-201ENST00000607622 580 ntBASIC0.91□□□□□ -2.26
HLA-DQA1P01909 AL157834.3-201ENST00000615543 103 ntBASIC0.91□□□□□ -2.26
HLA-DQA1P01909 MIR5701-2-201ENST00000615634 82 ntBASIC0.91□□□□□ -2.26
HLA-DQA1P01909 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC0.91□□□□□ -2.26
HLA-DQA1P01909 Y_RNA.2-201ENST00000362330 96 ntBASIC0.9□□□□□ -2.27
HLA-DQA1P01909 RNU6-1123P-201ENST00000362347 106 ntBASIC0.9□□□□□ -2.27
HLA-DQA1P01909 Y_RNA.6-201ENST00000362350 114 ntBASIC0.9□□□□□ -2.27
HLA-DQA1P01909 RNU6-874P-201ENST00000362390 105 ntBASIC0.9□□□□□ -2.27
HLA-DQA1P01909 RNU6-1266P-201ENST00000362794 105 ntBASIC0.9□□□□□ -2.27
HLA-DQA1P01909 MIR329-1-201ENST00000385028 80 ntBASIC0.9□□□□□ -2.27
HLA-DQA1P01909 RNU6-510P-201ENST00000391239 108 ntBASIC0.9□□□□□ -2.27
HLA-DQA1P01909 MIR190B-201ENST00000401119 79 ntBASIC0.9□□□□□ -2.27
HLA-DQA1P01909 MIR548K-201ENST00000408406 116 ntBASIC0.9□□□□□ -2.27
HLA-DQA1P01909 MIR548F5-201ENST00000408421 86 ntBASIC0.9□□□□□ -2.27
HLA-DQA1P01909 Y_RNA.594-201ENST00000410373 140 ntBASIC0.9□□□□□ -2.27
HLA-DQA1P01909 RNU6-1050P-201ENST00000410388 107 ntBASIC0.9□□□□□ -2.27
HLA-DQA1P01909 RN7SKP200-201ENST00000410564 320 ntBASIC0.9□□□□□ -2.27
HLA-DQA1P01909 RNU6-1001P-201ENST00000411265 100 ntBASIC0.9□□□□□ -2.27
HLA-DQA1P01909 MRPL35P3-201ENST00000421557 364 ntBASIC0.9□□□□□ -2.27
HLA-DQA1P01909 EIF1P2-201ENST00000428233 350 ntBASIC0.9□□□□□ -2.27
HLA-DQA1P01909 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.9□□□□□ -2.27
HLA-DQA1P01909 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.9□□□□□ -2.27
HLA-DQA1P01909 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.9□□□□□ -2.27
HLA-DQA1P01909 RNU1-123P-201ENST00000458950 160 ntBASIC0.9□□□□□ -2.27
HLA-DQA1P01909 U8.22-201ENST00000459141 133 ntBASIC0.9□□□□□ -2.27
HLA-DQA1P01909 RPS27P22-201ENST00000478056 241 ntBASIC0.9□□□□□ -2.27
HLA-DQA1P01909 RPL30P7-201ENST00000479312 323 ntBASIC0.9□□□□□ -2.27
HLA-DQA1P01909 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.9□□□□□ -2.27
HLA-DQA1P01909 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.9□□□□□ -2.27
HLA-DQA1P01909 AC004584.2-201ENST00000570407 410 ntBASIC0.9□□□□□ -2.27
HLA-DQA1P01909 MIR3664-201ENST00000579074 99 ntBASIC0.9□□□□□ -2.27
HLA-DQA1P01909 MIR4438-201ENST00000585271 93 ntBASIC0.9□□□□□ -2.27
HLA-DQA1P01909 AC125232.2-201ENST00000592457 143 ntBASIC0.9□□□□□ -2.27
HLA-DQA1P01909 AL021879.1-201ENST00000611756 288 ntBASIC0.9□□□□□ -2.27
HLA-DQA1P01909 AL357075.2-201ENST00000614906 189 ntBASIC0.9□□□□□ -2.27
HLA-DQA1P01909 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.9□□□□□ -2.27
HLA-DQA1P01909 RNU5F-3P-201ENST00000363767 117 ntBASIC0.89□□□□□ -2.27
HLA-DQA1P01909 RNU6-1065P-201ENST00000384513 106 ntBASIC0.89□□□□□ -2.27
HLA-DQA1P01909 RNU6-950P-201ENST00000384651 107 ntBASIC0.89□□□□□ -2.27
HLA-DQA1P01909 Y_RNA.557-201ENST00000384680 107 ntBASIC0.89□□□□□ -2.27
HLA-DQA1P01909 RNU6-482P-201ENST00000391068 107 ntBASIC0.89□□□□□ -2.27
HLA-DQA1P01909 SNORA17.3-201ENST00000391159 129 ntBASIC0.89□□□□□ -2.27
HLA-DQA1P01909 AL355796.1-201ENST00000406706 323 ntBASIC0.89□□□□□ -2.27
HLA-DQA1P01909 ELOCP21-201ENST00000412558 336 ntBASIC0.89□□□□□ -2.27
HLA-DQA1P01909 AC108667.1-201ENST00000428618 249 ntBASIC0.89□□□□□ -2.27
HLA-DQA1P01909 RPS3AP52-201ENST00000435639 297 ntBASIC0.89□□□□□ -2.27
HLA-DQA1P01909 RNU7-87P-201ENST00000459343 62 ntBASIC0.89□□□□□ -2.27
HLA-DQA1P01909 OR2A41P-201ENST00000473586 105 ntBASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms