Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 AC090543.2-201ENST00000483963 348 ntBASIC4.12□□□□□ -1.75
ALDH1A1P00352 AC004057.1-201ENST00000485827 348 ntBASIC4.12□□□□□ -1.75
ALDH1A1P00352 VWA8P1-201ENST00000510889 176 ntBASIC4.12□□□□□ -1.75
ALDH1A1P00352 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC4.12□□□□□ -1.75
ALDH1A1P00352 RNU6-521P-201ENST00000516663 105 ntBASIC4.12□□□□□ -1.75
ALDH1A1P00352 SCARNA15-202ENST00000516881 127 ntBASIC4.12□□□□□ -1.75
ALDH1A1P00352 HIGD1AP1-201ENST00000550979 275 ntBASIC4.12□□□□□ -1.75
ALDH1A1P00352 CYP4A43P-201ENST00000568156 121 ntBASIC4.12□□□□□ -1.75
ALDH1A1P00352 MIR3202-2-201ENST00000635980 79 ntBASIC4.12□□□□□ -1.75
ALDH1A1P00352 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC4.12□□□□□ -1.75
ALDH1A1P00352 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.12□□□□□ -1.75
ALDH1A1P00352 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
ALDH1A1P00352 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
ALDH1A1P00352 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
ALDH1A1P00352 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
ALDH1A1P00352 Y_RNA.17-201ENST00000362433 111 ntBASIC4.11□□□□□ -1.75
ALDH1A1P00352 SNORD32B-201ENST00000364460 84 ntBASIC4.11□□□□□ -1.75
ALDH1A1P00352 AC008134.1-201ENST00000420943 193 ntBASIC4.11□□□□□ -1.75
ALDH1A1P00352 RNU6-893P-201ENST00000458841 100 ntBASIC4.11□□□□□ -1.75
ALDH1A1P00352 RNA5SP208-201ENST00000516156 78 ntBASIC4.11□□□□□ -1.75
ALDH1A1P00352 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC4.11□□□□□ -1.75
ALDH1A1P00352 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
ALDH1A1P00352 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.11□□□□□ -1.75
ALDH1A1P00352 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
ALDH1A1P00352 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
ALDH1A1P00352 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
ALDH1A1P00352 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.1□□□□□ -1.75
ALDH1A1P00352 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
ALDH1A1P00352 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
ALDH1A1P00352 Z83843.1-201ENST00000604070 3685 ntBASIC4.1□□□□□ -1.75
ALDH1A1P00352 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
ALDH1A1P00352 SNORA80A-201ENST00000363922 136 ntBASIC4.1□□□□□ -1.75
ALDH1A1P00352 MIR3074-201ENST00000384885 81 ntBASIC4.1□□□□□ -1.75
ALDH1A1P00352 VDAC1P3-201ENST00000434069 851 ntBASIC4.1□□□□□ -1.75
ALDH1A1P00352 RPS4XP11-201ENST00000446897 772 ntBASIC4.1□□□□□ -1.75
ALDH1A1P00352 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.1□□□□□ -1.75
ALDH1A1P00352 RNU6-830P-201ENST00000516353 107 ntBASIC4.1□□□□□ -1.75
ALDH1A1P00352 AC008011.1-201ENST00000545989 227 ntBASIC4.1□□□□□ -1.75
ALDH1A1P00352 AC084364.2-201ENST00000546924 395 ntBASIC4.1□□□□□ -1.75
ALDH1A1P00352 FAM71BP1-201ENST00000604431 523 ntBASIC4.1□□□□□ -1.75
ALDH1A1P00352 AC073308.1-201ENST00000623696 305 ntBASIC4.1□□□□□ -1.75
ALDH1A1P00352 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
ALDH1A1P00352 AC010680.1-201ENST00000590024 3590 ntBASIC4.1□□□□□ -1.75
ALDH1A1P00352 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
ALDH1A1P00352 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.09□□□□□ -1.75
ALDH1A1P00352 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
ALDH1A1P00352 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
ALDH1A1P00352 RNU6-414P-201ENST00000363705 104 ntBASIC4.09□□□□□ -1.75
ALDH1A1P00352 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC4.09□□□□□ -1.75
ALDH1A1P00352 PPBPP1-201ENST00000510807 373 ntBASIC4.09□□□□□ -1.75
ALDH1A1P00352 RNU5F-4P-201ENST00000516581 114 ntBASIC4.09□□□□□ -1.75
ALDH1A1P00352 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC4.09□□□□□ -1.75
ALDH1A1P00352 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC4.09□□□□□ -1.75
ALDH1A1P00352 AC006435.5-201ENST00000624486 112 ntBASIC4.09□□□□□ -1.75
ALDH1A1P00352 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
ALDH1A1P00352 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC4.09□□□□□ -1.75
ALDH1A1P00352 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
ALDH1A1P00352 MAPK10-253ENST00000641010 4072 ntBASIC4.09□□□□□ -1.76
ALDH1A1P00352 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
ALDH1A1P00352 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC4.08□□□□□ -1.76
ALDH1A1P00352 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC4.08□□□□□ -1.76
ALDH1A1P00352 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
ALDH1A1P00352 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
ALDH1A1P00352 Y_RNA.107-201ENST00000363190 121 ntBASIC4.08□□□□□ -1.76
ALDH1A1P00352 Y_RNA.213-201ENST00000364178 111 ntBASIC4.08□□□□□ -1.76
ALDH1A1P00352 SNORD61-201ENST00000384252 73 ntBASIC4.08□□□□□ -1.76
ALDH1A1P00352 RNU6-301P-201ENST00000384277 107 ntBASIC4.08□□□□□ -1.76
ALDH1A1P00352 MIR513A2-201ENST00000385249 127 ntBASIC4.08□□□□□ -1.76
ALDH1A1P00352 MT-TI-201ENST00000387365 69 ntBASIC4.08□□□□□ -1.76
ALDH1A1P00352 MIR300-201ENST00000401138 83 ntBASIC4.08□□□□□ -1.76
ALDH1A1P00352 DBIP2-201ENST00000419076 262 ntBASIC4.08□□□□□ -1.76
ALDH1A1P00352 AL441985.1-201ENST00000457727 251 ntBASIC4.08□□□□□ -1.76
ALDH1A1P00352 RPS26P48-201ENST00000491713 339 ntBASIC4.08□□□□□ -1.76
ALDH1A1P00352 AC096725.1-201ENST00000514266 313 ntBASIC4.08□□□□□ -1.76
ALDH1A1P00352 RNA5SP341-201ENST00000516261 117 ntBASIC4.08□□□□□ -1.76
ALDH1A1P00352 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.08□□□□□ -1.76
ALDH1A1P00352 uc_338.32-201ENST00000615087 172 ntBASIC4.08□□□□□ -1.76
ALDH1A1P00352 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC4.08□□□□□ -1.76
ALDH1A1P00352 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.08□□□□□ -1.76
ALDH1A1P00352 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.08□□□□□ -1.76
ALDH1A1P00352 IPO8P1-201ENST00000455509 3109 ntBASIC4.08□□□□□ -1.76
ALDH1A1P00352 LINC02471-203ENST00000641941 4752 ntBASIC4.07□□□□□ -1.76
ALDH1A1P00352 UBE3AP2-201ENST00000429033 2259 ntBASIC4.07□□□□□ -1.76
ALDH1A1P00352 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.07□□□□□ -1.76
ALDH1A1P00352 AC011266.1-201ENST00000624119 3569 ntBASIC4.07□□□□□ -1.76
ALDH1A1P00352 Y_RNA.244-201ENST00000364484 109 ntBASIC4.07□□□□□ -1.76
ALDH1A1P00352 RNU6-975P-201ENST00000384296 105 ntBASIC4.07□□□□□ -1.76
ALDH1A1P00352 RNU1-57P-201ENST00000384491 166 ntBASIC4.07□□□□□ -1.76
ALDH1A1P00352 AL031121.1-201ENST00000406553 254 ntBASIC4.07□□□□□ -1.76
ALDH1A1P00352 RNU4-47P-201ENST00000410876 114 ntBASIC4.07□□□□□ -1.76
ALDH1A1P00352 RNU6-240P-201ENST00000516098 97 ntBASIC4.07□□□□□ -1.76
ALDH1A1P00352 RNA5SP309-201ENST00000516670 106 ntBASIC4.07□□□□□ -1.76
ALDH1A1P00352 RNA5SP468-201ENST00000516782 93 ntBASIC4.07□□□□□ -1.76
ALDH1A1P00352 IGKV2-26-201ENST00000518305 343 ntBASIC4.07□□□□□ -1.76
ALDH1A1P00352 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC4.07□□□□□ -1.76
ALDH1A1P00352 MIR3690-201ENST00000580266 75 ntBASIC4.07□□□□□ -1.76
ALDH1A1P00352 MIR4276-201ENST00000584832 70 ntBASIC4.07□□□□□ -1.76
ALDH1A1P00352 U4.6-201ENST00000621618 127 ntBASIC4.07□□□□□ -1.76
ALDH1A1P00352 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC4.07□□□□□ -1.76
ALDH1A1P00352 AL672296.1-201ENST00000427780 2158 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms