Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 SNORD12B-201ENST00000410433 91 ntBASIC1.85□□□□□ -2.11
CLDN1O95832 RNA5SP270-201ENST00000411361 118 ntBASIC1.85□□□□□ -2.11
CLDN1O95832 SRIP3-201ENST00000413200 219 ntBASIC1.85□□□□□ -2.11
CLDN1O95832 AC009238.1-201ENST00000442165 424 ntBASIC1.85□□□□□ -2.11
CLDN1O95832 AC009237.6-201ENST00000446969 424 ntBASIC1.85□□□□□ -2.11
CLDN1O95832 FCF1P4-201ENST00000448326 183 ntBASIC1.85□□□□□ -2.11
CLDN1O95832 HMGN2P9-201ENST00000476875 229 ntBASIC1.85□□□□□ -2.11
CLDN1O95832 AC104435.1-201ENST00000483483 166 ntBASIC1.85□□□□□ -2.11
CLDN1O95832 AC067942.3-201ENST00000512025 362 ntBASIC1.85□□□□□ -2.11
CLDN1O95832 AC074133.1-201ENST00000515696 183 ntBASIC1.85□□□□□ -2.11
CLDN1O95832 RNU7-193P-201ENST00000516723 65 ntBASIC1.85□□□□□ -2.11
CLDN1O95832 Y_RNA.715-201ENST00000517082 110 ntBASIC1.85□□□□□ -2.11
CLDN1O95832 RNU6-667P-201ENST00000517186 102 ntBASIC1.85□□□□□ -2.11
CLDN1O95832 AK6P2-201ENST00000549020 471 ntBASIC1.85□□□□□ -2.11
CLDN1O95832 AC110588.1-201ENST00000559699 137 ntBASIC1.85□□□□□ -2.11
CLDN1O95832 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.85□□□□□ -2.11
CLDN1O95832 AC233702.2-202ENST00000562547 291 ntBASIC1.85□□□□□ -2.11
CLDN1O95832 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.85□□□□□ -2.11
CLDN1O95832 AC113195.1-201ENST00000579952 141 ntBASIC1.85□□□□□ -2.11
CLDN1O95832 AL121655.1-201ENST00000605811 308 ntBASIC1.85□□□□□ -2.11
CLDN1O95832 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.85□□□□□ -2.11
CLDN1O95832 AC009831.4-201ENST00000620744 325 ntBASIC1.85□□□□□ -2.11
CLDN1O95832 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
CLDN1O95832 AC009487.4-201ENST00000624969 3585 ntBASIC1.84□□□□□ -2.11
CLDN1O95832 Y_RNA.380-201ENST00000365663 111 ntBASIC1.84□□□□□ -2.11
CLDN1O95832 MIR1283-1-201ENST00000408494 87 ntBASIC1.84□□□□□ -2.11
CLDN1O95832 MIR1252-201ENST00000408861 65 ntBASIC1.84□□□□□ -2.11
CLDN1O95832 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.84□□□□□ -2.11
CLDN1O95832 RPEP5-201ENST00000441137 268 ntBASIC1.84□□□□□ -2.11
CLDN1O95832 snoU13.18-201ENST00000459483 104 ntBASIC1.84□□□□□ -2.11
CLDN1O95832 RPL23AP63-201ENST00000498752 471 ntBASIC1.84□□□□□ -2.11
CLDN1O95832 AC093259.1-201ENST00000509755 300 ntBASIC1.84□□□□□ -2.11
CLDN1O95832 SNORA40.9-201ENST00000515895 93 ntBASIC1.84□□□□□ -2.11
CLDN1O95832 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.84□□□□□ -2.11
CLDN1O95832 CYCSP26-201ENST00000534107 320 ntBASIC1.84□□□□□ -2.11
CLDN1O95832 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.84□□□□□ -2.11
CLDN1O95832 AL390123.1-201ENST00000603216 237 ntBASIC1.84□□□□□ -2.11
CLDN1O95832 AL021879.1-201ENST00000611756 288 ntBASIC1.84□□□□□ -2.11
CLDN1O95832 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
CLDN1O95832 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
CLDN1O95832 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
CLDN1O95832 MIR340-201ENST00000362125 95 ntBASIC1.83□□□□□ -2.12
CLDN1O95832 Y_RNA.145-201ENST00000363527 102 ntBASIC1.83□□□□□ -2.12
CLDN1O95832 Y_RNA.153-201ENST00000363615 91 ntBASIC1.83□□□□□ -2.12
CLDN1O95832 Y_RNA.276-201ENST00000364732 109 ntBASIC1.83□□□□□ -2.12
CLDN1O95832 Y_RNA.415-201ENST00000384012 112 ntBASIC1.83□□□□□ -2.12
CLDN1O95832 Y_RNA.458-201ENST00000384240 102 ntBASIC1.83□□□□□ -2.12
CLDN1O95832 Y_RNA.527-201ENST00000384573 102 ntBASIC1.83□□□□□ -2.12
CLDN1O95832 Y_RNA.551-201ENST00000384661 102 ntBASIC1.83□□□□□ -2.12
CLDN1O95832 MIR7-2-201ENST00000384970 110 ntBASIC1.83□□□□□ -2.12
CLDN1O95832 ELOCP21-201ENST00000412558 336 ntBASIC1.83□□□□□ -2.12
CLDN1O95832 AC113618.1-201ENST00000416747 285 ntBASIC1.83□□□□□ -2.12
CLDN1O95832 AC073910.1-201ENST00000445047 438 ntBASIC1.83□□□□□ -2.12
CLDN1O95832 HMGN2P18-201ENST00000450680 270 ntBASIC1.83□□□□□ -2.12
CLDN1O95832 AL137159.1-201ENST00000452808 512 ntBASIC1.83□□□□□ -2.12
CLDN1O95832 PRELID3BP1-201ENST00000457142 540 ntBASIC1.83□□□□□ -2.12
CLDN1O95832 RNU7-14P-201ENST00000459331 62 ntBASIC1.83□□□□□ -2.12
CLDN1O95832 RNU6-764P-201ENST00000516396 105 ntBASIC1.83□□□□□ -2.12
CLDN1O95832 RNA5SP490-201ENST00000517141 136 ntBASIC1.83□□□□□ -2.12
CLDN1O95832 AC087441.2-201ENST00000529141 262 ntBASIC1.83□□□□□ -2.12
CLDN1O95832 RRN3P3-201ENST00000549207 578 ntBASIC1.83□□□□□ -2.12
CLDN1O95832 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.83□□□□□ -2.12
CLDN1O95832 AL355297.3-201ENST00000604082 446 ntBASIC1.83□□□□□ -2.12
CLDN1O95832 AL360085.1-201ENST00000604713 532 ntBASIC1.83□□□□□ -2.12
CLDN1O95832 PART1_1.1-201ENST00000611761 217 ntBASIC1.83□□□□□ -2.12
CLDN1O95832 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.83□□□□□ -2.12
CLDN1O95832 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.83□□□□□ -2.12
CLDN1O95832 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.83□□□□□ -2.12
CLDN1O95832 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
CLDN1O95832 U3.8-201ENST00000363675 217 ntBASIC1.82□□□□□ -2.12
CLDN1O95832 RNU6-450P-201ENST00000364654 107 ntBASIC1.82□□□□□ -2.12
CLDN1O95832 RNA5SP37-201ENST00000365420 130 ntBASIC1.82□□□□□ -2.12
CLDN1O95832 Y_RNA.424-201ENST00000384063 103 ntBASIC1.82□□□□□ -2.12
CLDN1O95832 MIR548F4-201ENST00000408515 105 ntBASIC1.82□□□□□ -2.12
CLDN1O95832 U3.40-201ENST00000408706 208 ntBASIC1.82□□□□□ -2.12
CLDN1O95832 RNU6-101P-201ENST00000410323 104 ntBASIC1.82□□□□□ -2.12
CLDN1O95832 RNU6-130P-201ENST00000411112 103 ntBASIC1.82□□□□□ -2.12
CLDN1O95832 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.82□□□□□ -2.12
CLDN1O95832 SNORD13-201ENST00000459299 104 ntBASIC1.82□□□□□ -2.12
CLDN1O95832 U8.20-201ENST00000459445 131 ntBASIC1.82□□□□□ -2.12
CLDN1O95832 RPS27P21-201ENST00000486977 252 ntBASIC1.82□□□□□ -2.12
CLDN1O95832 AC090255.1-201ENST00000495779 349 ntBASIC1.82□□□□□ -2.12
CLDN1O95832 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.82□□□□□ -2.12
CLDN1O95832 RNA5SP182-201ENST00000516064 82 ntBASIC1.82□□□□□ -2.12
CLDN1O95832 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.82□□□□□ -2.12
CLDN1O95832 RPS29P30-201ENST00000600975 111 ntBASIC1.82□□□□□ -2.12
CLDN1O95832 AC124312.5-201ENST00000604451 268 ntBASIC1.82□□□□□ -2.12
CLDN1O95832 Y_RNA.783-201ENST00000613546 102 ntBASIC1.82□□□□□ -2.12
CLDN1O95832 AC240442.1-201ENST00000616055 283 ntBASIC1.82□□□□□ -2.12
CLDN1O95832 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.82□□□□□ -2.12
CLDN1O95832 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
CLDN1O95832 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
CLDN1O95832 RNU6-661P-201ENST00000362409 107 ntBASIC1.81□□□□□ -2.12
CLDN1O95832 Y_RNA.99-201ENST00000363138 105 ntBASIC1.81□□□□□ -2.12
CLDN1O95832 SNORA16B-201ENST00000364674 135 ntBASIC1.81□□□□□ -2.12
CLDN1O95832 RNA5SP190-201ENST00000365222 118 ntBASIC1.81□□□□□ -2.12
CLDN1O95832 RNU6-1264P-201ENST00000383891 107 ntBASIC1.81□□□□□ -2.12
CLDN1O95832 Y_RNA.389-201ENST00000383924 113 ntBASIC1.81□□□□□ -2.12
CLDN1O95832 AP1B1P2-201ENST00000416196 106 ntBASIC1.81□□□□□ -2.12
CLDN1O95832 AC123900.1-201ENST00000420390 96 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 142.4 ms