Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 Y_RNA.544-201ENST00000384650 113 ntBASIC3.39□□□□□ -1.87
ALX3O95076 RNU2-37P-201ENST00000410695 177 ntBASIC3.39□□□□□ -1.87
ALX3O95076 RNU6-57P-201ENST00000411348 103 ntBASIC3.39□□□□□ -1.87
ALX3O95076 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.39□□□□□ -1.87
ALX3O95076 EIF4EP4-201ENST00000424916 578 ntBASIC3.39□□□□□ -1.87
ALX3O95076 RPS29P7-201ENST00000439662 171 ntBASIC3.39□□□□□ -1.87
ALX3O95076 AC010099.1-201ENST00000455434 375 ntBASIC3.39□□□□□ -1.87
ALX3O95076 AC010401.1-201ENST00000463867 348 ntBASIC3.39□□□□□ -1.87
ALX3O95076 AC093663.1-201ENST00000497190 394 ntBASIC3.39□□□□□ -1.87
ALX3O95076 ATP5EP1-201ENST00000510257 156 ntBASIC3.39□□□□□ -1.87
ALX3O95076 RNU6-504P-201ENST00000516568 104 ntBASIC3.39□□□□□ -1.87
ALX3O95076 RNU6-638P-201ENST00000516582 104 ntBASIC3.39□□□□□ -1.87
ALX3O95076 YPEL5P3-201ENST00000547227 352 ntBASIC3.39□□□□□ -1.87
ALX3O95076 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.39□□□□□ -1.87
ALX3O95076 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.39□□□□□ -1.87
ALX3O95076 MIR6868-201ENST00000611215 58 ntBASIC3.39□□□□□ -1.87
ALX3O95076 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC3.39□□□□□ -1.87
ALX3O95076 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
ALX3O95076 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.39□□□□□ -1.87
ALX3O95076 AC002064.3-201ENST00000623448 346 ntBASIC3.39□□□□□ -1.87
ALX3O95076 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
ALX3O95076 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
ALX3O95076 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
ALX3O95076 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
ALX3O95076 AC058791.1-201ENST00000608412 3198 ntBASIC3.39□□□□□ -1.87
ALX3O95076 AC002546.1-201ENST00000588041 2504 ntBASIC3.38□□□□□ -1.87
ALX3O95076 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.38□□□□□ -1.87
ALX3O95076 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
ALX3O95076 Y_RNA.49-201ENST00000362714 112 ntBASIC3.38□□□□□ -1.87
ALX3O95076 RNA5SP399-201ENST00000364003 117 ntBASIC3.38□□□□□ -1.87
ALX3O95076 SNORA73.2-201ENST00000364946 201 ntBASIC3.38□□□□□ -1.87
ALX3O95076 RNU6-198P-201ENST00000384258 104 ntBASIC3.38□□□□□ -1.87
ALX3O95076 MIR199A2-201ENST00000385289 110 ntBASIC3.38□□□□□ -1.87
ALX3O95076 AL031121.1-201ENST00000406553 254 ntBASIC3.38□□□□□ -1.87
ALX3O95076 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.38□□□□□ -1.87
ALX3O95076 RPS4XP11-201ENST00000446897 772 ntBASIC3.38□□□□□ -1.87
ALX3O95076 HMGN2P16-201ENST00000456802 261 ntBASIC3.38□□□□□ -1.87
ALX3O95076 RNU6-948P-201ENST00000516374 107 ntBASIC3.38□□□□□ -1.87
ALX3O95076 AC027419.1-201ENST00000522976 328 ntBASIC3.38□□□□□ -1.87
ALX3O95076 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.38□□□□□ -1.87
ALX3O95076 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.38□□□□□ -1.87
ALX3O95076 AC107294.3-201ENST00000609211 526 ntBASIC3.38□□□□□ -1.87
ALX3O95076 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
ALX3O95076 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
ALX3O95076 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.37□□□□□ -1.87
ALX3O95076 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.37□□□□□ -1.87
ALX3O95076 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
ALX3O95076 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.37□□□□□ -1.87
ALX3O95076 SNORD31B-201ENST00000364977 69 ntBASIC3.37□□□□□ -1.87
ALX3O95076 SNORA51.10-201ENST00000384418 136 ntBASIC3.37□□□□□ -1.87
ALX3O95076 MIR34B-201ENST00000385076 84 ntBASIC3.37□□□□□ -1.87
ALX3O95076 AC093578.1-201ENST00000415219 368 ntBASIC3.37□□□□□ -1.87
ALX3O95076 RN7SKP209-201ENST00000516888 304 ntBASIC3.37□□□□□ -1.87
ALX3O95076 AC109329.2-201ENST00000519658 482 ntBASIC3.37□□□□□ -1.87
ALX3O95076 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.37□□□□□ -1.87
ALX3O95076 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.37□□□□□ -1.87
ALX3O95076 SNORA51-201ENST00000606420 132 ntBASIC3.37□□□□□ -1.87
ALX3O95076 PWAR6-201ENST00000552334 4618 ntBASIC3.37□□□□□ -1.87
ALX3O95076 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.37□□□□□ -1.87
ALX3O95076 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
ALX3O95076 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
ALX3O95076 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
ALX3O95076 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
ALX3O95076 RNU1-22P-201ENST00000363334 158 ntBASIC3.36□□□□□ -1.87
ALX3O95076 SNORA1-201ENST00000384107 130 ntBASIC3.36□□□□□ -1.87
ALX3O95076 RNU6-1235P-201ENST00000384559 107 ntBASIC3.36□□□□□ -1.87
ALX3O95076 RNU6-440P-201ENST00000390882 105 ntBASIC3.36□□□□□ -1.87
ALX3O95076 SNORA48.8-201ENST00000391324 134 ntBASIC3.36□□□□□ -1.87
ALX3O95076 MIR1294-201ENST00000408503 142 ntBASIC3.36□□□□□ -1.87
ALX3O95076 EDDM3CP-201ENST00000415977 425 ntBASIC3.36□□□□□ -1.87
ALX3O95076 AC008134.1-201ENST00000420943 193 ntBASIC3.36□□□□□ -1.87
ALX3O95076 AC016717.1-201ENST00000448918 286 ntBASIC3.36□□□□□ -1.87
ALX3O95076 RNU6-498P-201ENST00000459468 107 ntBASIC3.36□□□□□ -1.87
ALX3O95076 RPL30P14-201ENST00000482744 348 ntBASIC3.36□□□□□ -1.87
ALX3O95076 RN7SKP43-201ENST00000516173 320 ntBASIC3.36□□□□□ -1.87
ALX3O95076 RN7SL600P-201ENST00000581811 299 ntBASIC3.36□□□□□ -1.87
ALX3O95076 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.36□□□□□ -1.87
ALX3O95076 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
ALX3O95076 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
ALX3O95076 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.36□□□□□ -1.87
ALX3O95076 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
ALX3O95076 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
ALX3O95076 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
ALX3O95076 RNA5SP119-201ENST00000362715 117 ntBASIC3.35□□□□□ -1.87
ALX3O95076 RNU6-1240P-201ENST00000365155 104 ntBASIC3.35□□□□□ -1.87
ALX3O95076 MIR488-201ENST00000365739 83 ntBASIC3.35□□□□□ -1.87
ALX3O95076 AC097463.2-201ENST00000421074 142 ntBASIC3.35□□□□□ -1.87
ALX3O95076 RPL39P34-201ENST00000477141 156 ntBASIC3.35□□□□□ -1.87
ALX3O95076 RNU6-970P-201ENST00000516312 107 ntBASIC3.35□□□□□ -1.87
ALX3O95076 RNU6-158P-201ENST00000517104 100 ntBASIC3.35□□□□□ -1.87
ALX3O95076 AC011604.1-201ENST00000545978 196 ntBASIC3.35□□□□□ -1.87
ALX3O95076 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.35□□□□□ -1.87
ALX3O95076 MIR3129-201ENST00000581095 76 ntBASIC3.35□□□□□ -1.87
ALX3O95076 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.35□□□□□ -1.87
ALX3O95076 AL137849.1-201ENST00000604767 169 ntBASIC3.35□□□□□ -1.87
ALX3O95076 AC062037.1-201ENST00000605302 128 ntBASIC3.35□□□□□ -1.87
ALX3O95076 AL137067.1-201ENST00000615933 120 ntBASIC3.35□□□□□ -1.87
ALX3O95076 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
ALX3O95076 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
ALX3O95076 AL596211.1-201ENST00000569873 2277 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms