Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
CNOT3O75175 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
CNOT3O75175 RNA5SP289-201ENST00000362332 137 ntBASIC2.4□□□□□ -2.03
CNOT3O75175 RNY1-201ENST00000364228 113 ntBASIC2.4□□□□□ -2.03
CNOT3O75175 Y_RNA.275-201ENST00000364726 110 ntBASIC2.4□□□□□ -2.03
CNOT3O75175 RNU6-1264P-201ENST00000383891 107 ntBASIC2.4□□□□□ -2.03
CNOT3O75175 RNU6-662P-201ENST00000384253 104 ntBASIC2.4□□□□□ -2.03
CNOT3O75175 RNU6-1289P-201ENST00000384431 106 ntBASIC2.4□□□□□ -2.03
CNOT3O75175 MIR29B2-201ENST00000385055 81 ntBASIC2.4□□□□□ -2.03
CNOT3O75175 RNU6-651P-201ENST00000411040 105 ntBASIC2.4□□□□□ -2.03
CNOT3O75175 Y_RNA.793-201ENST00000411222 111 ntBASIC2.4□□□□□ -2.03
CNOT3O75175 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.4□□□□□ -2.03
CNOT3O75175 EEF1B2P7-201ENST00000451177 676 ntBASIC2.4□□□□□ -2.03
CNOT3O75175 AL138752.1-201ENST00000452964 351 ntBASIC2.4□□□□□ -2.03
CNOT3O75175 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.4□□□□□ -2.03
CNOT3O75175 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.4□□□□□ -2.03
CNOT3O75175 MIR3945-201ENST00000581853 98 ntBASIC2.4□□□□□ -2.03
CNOT3O75175 AC090616.3-201ENST00000582184 217 ntBASIC2.4□□□□□ -2.03
CNOT3O75175 MIR3199-1-201ENST00000582434 88 ntBASIC2.4□□□□□ -2.03
CNOT3O75175 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.4□□□□□ -2.03
CNOT3O75175 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.4□□□□□ -2.03
CNOT3O75175 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
CNOT3O75175 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
CNOT3O75175 AC005336.3-201ENST00000623833 2679 ntBASIC2.4□□□□□ -2.03
CNOT3O75175 Z82209.1-201ENST00000422141 2135 ntBASIC2.39□□□□□ -2.03
CNOT3O75175 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.39□□□□□ -2.03
CNOT3O75175 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
CNOT3O75175 RNU6-1305P-201ENST00000364353 104 ntBASIC2.39□□□□□ -2.03
CNOT3O75175 MIR27B-201ENST00000385129 97 ntBASIC2.39□□□□□ -2.03
CNOT3O75175 SNORD58.1-201ENST00000391313 66 ntBASIC2.39□□□□□ -2.03
CNOT3O75175 RNU2-54P-201ENST00000410299 190 ntBASIC2.39□□□□□ -2.03
CNOT3O75175 AL139156.1-201ENST00000412785 841 ntBASIC2.39□□□□□ -2.03
CNOT3O75175 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.39□□□□□ -2.03
CNOT3O75175 SNORD116-28-201ENST00000516123 91 ntBASIC2.39□□□□□ -2.03
CNOT3O75175 SNORA27.4-201ENST00000516650 95 ntBASIC2.39□□□□□ -2.03
CNOT3O75175 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.39□□□□□ -2.03
CNOT3O75175 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.39□□□□□ -2.03
CNOT3O75175 DEFB117-201ENST00000602356 141 ntBASIC2.39□□□□□ -2.03
CNOT3O75175 AC005828.6-201ENST00000606610 232 ntBASIC2.39□□□□□ -2.03
CNOT3O75175 AC098479.1-201ENST00000609225 154 ntBASIC2.39□□□□□ -2.03
CNOT3O75175 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.39□□□□□ -2.03
CNOT3O75175 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.39□□□□□ -2.03
CNOT3O75175 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.38□□□□□ -2.03
CNOT3O75175 Y_RNA.136-201ENST00000363444 102 ntBASIC2.38□□□□□ -2.03
CNOT3O75175 Y_RNA.270-201ENST00000364693 104 ntBASIC2.38□□□□□ -2.03
CNOT3O75175 Y_RNA.292-201ENST00000364904 97 ntBASIC2.38□□□□□ -2.03
CNOT3O75175 Y_RNA.785-201ENST00000384290 109 ntBASIC2.38□□□□□ -2.03
CNOT3O75175 RPL30P4-201ENST00000429309 333 ntBASIC2.38□□□□□ -2.03
CNOT3O75175 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.38□□□□□ -2.03
CNOT3O75175 RNU6-1098P-201ENST00000516772 96 ntBASIC2.38□□□□□ -2.03
CNOT3O75175 Y_RNA.700-201ENST00000516806 100 ntBASIC2.38□□□□□ -2.03
CNOT3O75175 SCARNA11.3-201ENST00000517276 130 ntBASIC2.38□□□□□ -2.03
CNOT3O75175 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.38□□□□□ -2.03
CNOT3O75175 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.38□□□□□ -2.03
CNOT3O75175 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.38□□□□□ -2.03
CNOT3O75175 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
CNOT3O75175 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.37□□□□□ -2.03
CNOT3O75175 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
CNOT3O75175 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CNOT3O75175 MIR411-201ENST00000362239 96 ntBASIC2.37□□□□□ -2.03
CNOT3O75175 Y_RNA.122-201ENST00000363331 96 ntBASIC2.37□□□□□ -2.03
CNOT3O75175 Y_RNA.150-201ENST00000363562 102 ntBASIC2.37□□□□□ -2.03
CNOT3O75175 Y_RNA.329-201ENST00000365209 107 ntBASIC2.37□□□□□ -2.03
CNOT3O75175 RNU6-1274P-201ENST00000384557 107 ntBASIC2.37□□□□□ -2.03
CNOT3O75175 MIR548I3-201ENST00000408378 149 ntBASIC2.37□□□□□ -2.03
CNOT3O75175 MIR1294-201ENST00000408503 142 ntBASIC2.37□□□□□ -2.03
CNOT3O75175 MIR548I1-201ENST00000408810 149 ntBASIC2.37□□□□□ -2.03
CNOT3O75175 RNA5SP504-201ENST00000410676 117 ntBASIC2.37□□□□□ -2.03
CNOT3O75175 AC024067.1-201ENST00000426199 223 ntBASIC2.37□□□□□ -2.03
CNOT3O75175 Y_RNA.644-201ENST00000459006 113 ntBASIC2.37□□□□□ -2.03
CNOT3O75175 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.37□□□□□ -2.03
CNOT3O75175 CKS1BP2-201ENST00000497342 240 ntBASIC2.37□□□□□ -2.03
CNOT3O75175 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.37□□□□□ -2.03
CNOT3O75175 Y_RNA.674-201ENST00000516362 113 ntBASIC2.37□□□□□ -2.03
CNOT3O75175 MIR5694-201ENST00000581190 76 ntBASIC2.37□□□□□ -2.03
CNOT3O75175 MIR4435-1-201ENST00000582552 80 ntBASIC2.37□□□□□ -2.03
CNOT3O75175 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.37□□□□□ -2.03
CNOT3O75175 AC004792.1-201ENST00000614523 137 ntBASIC2.37□□□□□ -2.03
CNOT3O75175 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CNOT3O75175 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.36□□□□□ -2.03
CNOT3O75175 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CNOT3O75175 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
CNOT3O75175 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CNOT3O75175 RNU6-944P-201ENST00000364023 107 ntBASIC2.36□□□□□ -2.03
CNOT3O75175 RNU6-454P-201ENST00000364292 107 ntBASIC2.36□□□□□ -2.03
CNOT3O75175 SNORD32B-201ENST00000364460 84 ntBASIC2.36□□□□□ -2.03
CNOT3O75175 RNU4-70P-201ENST00000384579 139 ntBASIC2.36□□□□□ -2.03
CNOT3O75175 U3.40-201ENST00000408706 208 ntBASIC2.36□□□□□ -2.03
CNOT3O75175 RNU6-1199P-201ENST00000411249 104 ntBASIC2.36□□□□□ -2.03
CNOT3O75175 Y_RNA.626-201ENST00000411288 95 ntBASIC2.36□□□□□ -2.03
CNOT3O75175 SUMO1P2-201ENST00000452524 304 ntBASIC2.36□□□□□ -2.03
CNOT3O75175 RNU7-14P-201ENST00000459331 62 ntBASIC2.36□□□□□ -2.03
CNOT3O75175 AC008413.1-201ENST00000511864 177 ntBASIC2.36□□□□□ -2.03
CNOT3O75175 RNU6-586P-201ENST00000517265 104 ntBASIC2.36□□□□□ -2.03
CNOT3O75175 U4.3-201ENST00000621047 82 ntBASIC2.36□□□□□ -2.03
CNOT3O75175 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.36□□□□□ -2.03
CNOT3O75175 CTSLP2-204ENST00000629029 392 ntBASIC2.36□□□□□ -2.03
CNOT3O75175 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
CNOT3O75175 UBE2WP1-201ENST00000362030 340 ntBASIC2.35□□□□□ -2.03
CNOT3O75175 RNU6-545P-201ENST00000362681 104 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 166.6 ms