Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 RNU6-136P-201ENST00000384663 107 ntBASIC3.07□□□□□ -1.92
TRIM13O60858 MIR147B-201ENST00000390185 80 ntBASIC3.07□□□□□ -1.92
TRIM13O60858 RNA5SP274-201ENST00000410484 108 ntBASIC3.07□□□□□ -1.92
TRIM13O60858 RN7SKP101-201ENST00000411376 320 ntBASIC3.07□□□□□ -1.92
TRIM13O60858 AL139281.1-201ENST00000422120 335 ntBASIC3.07□□□□□ -1.92
TRIM13O60858 AL353705.1-201ENST00000433468 480 ntBASIC3.07□□□□□ -1.92
TRIM13O60858 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC3.07□□□□□ -1.92
TRIM13O60858 AL031183.1-201ENST00000457667 207 ntBASIC3.07□□□□□ -1.92
TRIM13O60858 RN7SKP19-201ENST00000516016 252 ntBASIC3.07□□□□□ -1.92
TRIM13O60858 EIF4A1P12-201ENST00000551910 141 ntBASIC3.07□□□□□ -1.92
TRIM13O60858 AL160236.1-201ENST00000556317 195 ntBASIC3.07□□□□□ -1.92
TRIM13O60858 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.07□□□□□ -1.92
TRIM13O60858 MIR5006-201ENST00000583027 110 ntBASIC3.07□□□□□ -1.92
TRIM13O60858 MIR3922-201ENST00000585192 84 ntBASIC3.07□□□□□ -1.92
TRIM13O60858 AP003357.1-201ENST00000604497 148 ntBASIC3.07□□□□□ -1.92
TRIM13O60858 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC3.07□□□□□ -1.92
TRIM13O60858 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.07□□□□□ -1.92
TRIM13O60858 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
TRIM13O60858 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
TRIM13O60858 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.06□□□□□ -1.92
TRIM13O60858 SNORD114-7-201ENST00000362520 77 ntBASIC3.06□□□□□ -1.92
TRIM13O60858 RNU6-294P-201ENST00000364999 102 ntBASIC3.06□□□□□ -1.92
TRIM13O60858 SNORA18.2-201ENST00000383865 132 ntBASIC3.06□□□□□ -1.92
TRIM13O60858 RNU6-484P-201ENST00000384016 107 ntBASIC3.06□□□□□ -1.92
TRIM13O60858 SNORA26.2-201ENST00000390922 122 ntBASIC3.06□□□□□ -1.92
TRIM13O60858 U6atac.2-201ENST00000408644 118 ntBASIC3.06□□□□□ -1.92
TRIM13O60858 RNU6-554P-201ENST00000410466 106 ntBASIC3.06□□□□□ -1.92
TRIM13O60858 RPL39P40-201ENST00000445481 146 ntBASIC3.06□□□□□ -1.92
TRIM13O60858 Y_RNA.690-201ENST00000516603 95 ntBASIC3.06□□□□□ -1.92
TRIM13O60858 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.06□□□□□ -1.92
TRIM13O60858 AC105137.2-201ENST00000569073 466 ntBASIC3.06□□□□□ -1.92
TRIM13O60858 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.06□□□□□ -1.92
TRIM13O60858 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
TRIM13O60858 Y_RNA.124-201ENST00000363339 93 ntBASIC3.05□□□□□ -1.92
TRIM13O60858 RNU1-105P-201ENST00000363470 161 ntBASIC3.05□□□□□ -1.92
TRIM13O60858 RNA5SP50-201ENST00000363731 107 ntBASIC3.05□□□□□ -1.92
TRIM13O60858 Y_RNA.587-201ENST00000391210 103 ntBASIC3.05□□□□□ -1.92
TRIM13O60858 RNA5SP496-201ENST00000391240 109 ntBASIC3.05□□□□□ -1.92
TRIM13O60858 RNU2-55P-201ENST00000411146 174 ntBASIC3.05□□□□□ -1.92
TRIM13O60858 RPS29P4-201ENST00000414733 161 ntBASIC3.05□□□□□ -1.92
TRIM13O60858 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.05□□□□□ -1.92
TRIM13O60858 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.05□□□□□ -1.92
TRIM13O60858 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.05□□□□□ -1.92
TRIM13O60858 RPS29P2-201ENST00000479278 136 ntBASIC3.05□□□□□ -1.92
TRIM13O60858 SRIP1-201ENST00000489235 288 ntBASIC3.05□□□□□ -1.92
TRIM13O60858 RNU6-711P-201ENST00000517255 106 ntBASIC3.05□□□□□ -1.92
TRIM13O60858 AC026403.1-201ENST00000518938 295 ntBASIC3.05□□□□□ -1.92
TRIM13O60858 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.05□□□□□ -1.92
TRIM13O60858 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.05□□□□□ -1.92
TRIM13O60858 AL021707.8-201ENST00000609428 183 ntBASIC3.05□□□□□ -1.92
TRIM13O60858 AC025166.1-201ENST00000612411 163 ntBASIC3.05□□□□□ -1.92
TRIM13O60858 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
TRIM13O60858 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC3.05□□□□□ -1.92
TRIM13O60858 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
TRIM13O60858 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.05□□□□□ -1.92
TRIM13O60858 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.05□□□□□ -1.92
TRIM13O60858 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
TRIM13O60858 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
TRIM13O60858 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
TRIM13O60858 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.04□□□□□ -1.92
TRIM13O60858 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
TRIM13O60858 RNU6-309P-201ENST00000364573 106 ntBASIC3.04□□□□□ -1.92
TRIM13O60858 Y_RNA.281-201ENST00000364774 94 ntBASIC3.04□□□□□ -1.92
TRIM13O60858 RNU6-1323P-201ENST00000384025 107 ntBASIC3.04□□□□□ -1.92
TRIM13O60858 Y_RNA.432-201ENST00000384087 111 ntBASIC3.04□□□□□ -1.92
TRIM13O60858 MIR518C-201ENST00000384822 101 ntBASIC3.04□□□□□ -1.92
TRIM13O60858 MIR548B-201ENST00000385247 97 ntBASIC3.04□□□□□ -1.92
TRIM13O60858 SNORA57.1-201ENST00000391227 145 ntBASIC3.04□□□□□ -1.92
TRIM13O60858 RN7SKP202-201ENST00000410439 330 ntBASIC3.04□□□□□ -1.92
TRIM13O60858 AL133547.1-201ENST00000448546 220 ntBASIC3.04□□□□□ -1.92
TRIM13O60858 AC090515.1-201ENST00000465295 476 ntBASIC3.04□□□□□ -1.92
TRIM13O60858 RN7SL20P-201ENST00000488827 297 ntBASIC3.04□□□□□ -1.92
TRIM13O60858 RN7SL633P-201ENST00000488974 297 ntBASIC3.04□□□□□ -1.92
TRIM13O60858 RN7SKP282-201ENST00000516824 299 ntBASIC3.04□□□□□ -1.92
TRIM13O60858 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.04□□□□□ -1.92
TRIM13O60858 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.04□□□□□ -1.92
TRIM13O60858 AC018630.3-201ENST00000542637 96 ntBASIC3.04□□□□□ -1.92
TRIM13O60858 AL137843.1-201ENST00000605078 385 ntBASIC3.04□□□□□ -1.92
TRIM13O60858 CR392039.5-201ENST00000623201 510 ntBASIC3.04□□□□□ -1.92
TRIM13O60858 AL159152.1-201ENST00000635019 2587 ntBASIC3.04□□□□□ -1.92
TRIM13O60858 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
TRIM13O60858 RNU4-15P-201ENST00000362613 141 ntBASIC3.03□□□□□ -1.92
TRIM13O60858 Y_RNA.40-201ENST00000362645 93 ntBASIC3.03□□□□□ -1.92
TRIM13O60858 RNU6-508P-201ENST00000363231 103 ntBASIC3.03□□□□□ -1.92
TRIM13O60858 SNORA14A-201ENST00000364773 135 ntBASIC3.03□□□□□ -1.92
TRIM13O60858 SNORD18B-201ENST00000365659 72 ntBASIC3.03□□□□□ -1.92
TRIM13O60858 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
TRIM13O60858 SNORD116-13-201ENST00000384408 92 ntBASIC3.03□□□□□ -1.92
TRIM13O60858 MIR767-201ENST00000390228 109 ntBASIC3.03□□□□□ -1.92
TRIM13O60858 SNORD72-201ENST00000390994 80 ntBASIC3.03□□□□□ -1.92
TRIM13O60858 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.03□□□□□ -1.92
TRIM13O60858 RPL23AP7-203ENST00000449021 469 ntBASIC3.03□□□□□ -1.92
TRIM13O60858 RNU6-412P-201ENST00000516434 106 ntBASIC3.03□□□□□ -1.92
TRIM13O60858 RNU2-44P-201ENST00000516795 194 ntBASIC3.03□□□□□ -1.92
TRIM13O60858 RNU6-762P-201ENST00000517107 102 ntBASIC3.03□□□□□ -1.92
TRIM13O60858 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.03□□□□□ -1.92
TRIM13O60858 RPS15AP11-201ENST00000594193 385 ntBASIC3.03□□□□□ -1.92
TRIM13O60858 AC019176.2-201ENST00000611579 315 ntBASIC3.03□□□□□ -1.92
TRIM13O60858 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
TRIM13O60858 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 210.1 ms