Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 MIR3684-201ENST00000579779 74 ntBASIC2.46□□□□□ -2.02
PHGDHO43175 AL137847.3-201ENST00000611521 109 ntBASIC2.46□□□□□ -2.02
PHGDHO43175 SCARNA15.3-201ENST00000626315 122 ntBASIC2.46□□□□□ -2.02
PHGDHO43175 SCARNA4.1-201ENST00000628597 123 ntBASIC2.46□□□□□ -2.02
PHGDHO43175 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.46□□□□□ -2.02
PHGDHO43175 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.45□□□□□ -2.02
PHGDHO43175 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.45□□□□□ -2.02
PHGDHO43175 RNU4-90P-201ENST00000362773 141 ntBASIC2.45□□□□□ -2.02
PHGDHO43175 SNORA5B-201ENST00000363786 132 ntBASIC2.45□□□□□ -2.02
PHGDHO43175 RNU6-324P-201ENST00000363957 106 ntBASIC2.45□□□□□ -2.02
PHGDHO43175 RNU6-702P-201ENST00000364982 107 ntBASIC2.45□□□□□ -2.02
PHGDHO43175 SNORA40.19-201ENST00000390846 128 ntBASIC2.45□□□□□ -2.02
PHGDHO43175 Y_RNA.581-201ENST00000391017 97 ntBASIC2.45□□□□□ -2.02
PHGDHO43175 MIR1253-201ENST00000408273 105 ntBASIC2.45□□□□□ -2.02
PHGDHO43175 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.45□□□□□ -2.02
PHGDHO43175 BX510359.4-201ENST00000423750 193 ntBASIC2.45□□□□□ -2.02
PHGDHO43175 HSPE1P25-201ENST00000455484 251 ntBASIC2.45□□□□□ -2.02
PHGDHO43175 HMGB3P17-201ENST00000504195 649 ntBASIC2.45□□□□□ -2.02
PHGDHO43175 RNU6-496P-201ENST00000516145 99 ntBASIC2.45□□□□□ -2.02
PHGDHO43175 Y_RNA.668-201ENST00000516233 93 ntBASIC2.45□□□□□ -2.02
PHGDHO43175 AC027419.1-201ENST00000522976 328 ntBASIC2.45□□□□□ -2.02
PHGDHO43175 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.45□□□□□ -2.02
PHGDHO43175 SDR42E1P4-201ENST00000620894 481 ntBASIC2.45□□□□□ -2.02
PHGDHO43175 IGHVIII-44-202ENST00000636235 289 ntBASIC2.45□□□□□ -2.02
PHGDHO43175 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
PHGDHO43175 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
PHGDHO43175 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
PHGDHO43175 RNU1-58P-201ENST00000362413 163 ntBASIC2.44□□□□□ -2.02
PHGDHO43175 RNA5SP456-201ENST00000364002 114 ntBASIC2.44□□□□□ -2.02
PHGDHO43175 Y_RNA.243-201ENST00000364481 109 ntBASIC2.44□□□□□ -2.02
PHGDHO43175 HMGN2P39-201ENST00000398005 273 ntBASIC2.44□□□□□ -2.02
PHGDHO43175 RNU6-1199P-201ENST00000411249 104 ntBASIC2.44□□□□□ -2.02
PHGDHO43175 TRBVB-201ENST00000477100 408 ntBASIC2.44□□□□□ -2.02
PHGDHO43175 AC011406.1-201ENST00000512440 370 ntBASIC2.44□□□□□ -2.02
PHGDHO43175 RNU6-1041P-201ENST00000516254 102 ntBASIC2.44□□□□□ -2.02
PHGDHO43175 RNA5SP320-201ENST00000516263 124 ntBASIC2.44□□□□□ -2.02
PHGDHO43175 SNORA31.11-201ENST00000516528 139 ntBASIC2.44□□□□□ -2.02
PHGDHO43175 AC004817.2-201ENST00000561794 651 ntBASIC2.44□□□□□ -2.02
PHGDHO43175 AC008749.1-201ENST00000597650 306 ntBASIC2.44□□□□□ -2.02
PHGDHO43175 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.44□□□□□ -2.02
PHGDHO43175 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.44□□□□□ -2.02
PHGDHO43175 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.44□□□□□ -2.02
PHGDHO43175 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
PHGDHO43175 SNORD81.1-201ENST00000363064 77 ntBASIC2.43□□□□□ -2.02
PHGDHO43175 SNORD115-30-201ENST00000364117 82 ntBASIC2.43□□□□□ -2.02
PHGDHO43175 RNU1-51P-201ENST00000365345 176 ntBASIC2.43□□□□□ -2.02
PHGDHO43175 MIR518A2-201ENST00000384966 87 ntBASIC2.43□□□□□ -2.02
PHGDHO43175 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
PHGDHO43175 RNU11-3P-201ENST00000391111 133 ntBASIC2.43□□□□□ -2.02
PHGDHO43175 RNU2-38P-201ENST00000410856 79 ntBASIC2.43□□□□□ -2.02
PHGDHO43175 HMGN2P34-201ENST00000437647 269 ntBASIC2.43□□□□□ -2.02
PHGDHO43175 POLR2KP2-201ENST00000438155 177 ntBASIC2.43□□□□□ -2.02
PHGDHO43175 ATP5J2P3-201ENST00000451550 258 ntBASIC2.43□□□□□ -2.02
PHGDHO43175 SNORD127-201ENST00000458892 86 ntBASIC2.43□□□□□ -2.02
PHGDHO43175 SNORD65B-201ENST00000459126 73 ntBASIC2.43□□□□□ -2.02
PHGDHO43175 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.43□□□□□ -2.02
PHGDHO43175 AC010598.1-201ENST00000510378 103 ntBASIC2.43□□□□□ -2.02
PHGDHO43175 RNU6-1146P-201ENST00000516282 102 ntBASIC2.43□□□□□ -2.02
PHGDHO43175 SUMO2P18-201ENST00000518873 252 ntBASIC2.43□□□□□ -2.02
PHGDHO43175 AP005660.1-201ENST00000522972 293 ntBASIC2.43□□□□□ -2.02
PHGDHO43175 DEFB108E-201ENST00000524692 240 ntBASIC2.43□□□□□ -2.02
PHGDHO43175 MIR3169-201ENST00000578032 83 ntBASIC2.43□□□□□ -2.02
PHGDHO43175 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.43□□□□□ -2.02
PHGDHO43175 AP001282.2-201ENST00000616149 309 ntBASIC2.43□□□□□ -2.02
PHGDHO43175 U6.104-201ENST00000637979 90 ntBASIC2.43□□□□□ -2.02
PHGDHO43175 AC010615.1-201ENST00000594254 1764 ntBASIC2.43□□□□□ -2.02
PHGDHO43175 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
PHGDHO43175 MIR21-201ENST00000362134 72 ntBASIC2.42□□□□□ -2.02
PHGDHO43175 Y_RNA.237-201ENST00000364439 102 ntBASIC2.42□□□□□ -2.02
PHGDHO43175 RNU6-290P-201ENST00000365212 101 ntBASIC2.42□□□□□ -2.02
PHGDHO43175 SNORA20B-201ENST00000384220 132 ntBASIC2.42□□□□□ -2.02
PHGDHO43175 Y_RNA.556-201ENST00000384677 113 ntBASIC2.42□□□□□ -2.02
PHGDHO43175 MIR27B-201ENST00000385129 97 ntBASIC2.42□□□□□ -2.02
PHGDHO43175 U3.40-201ENST00000408706 208 ntBASIC2.42□□□□□ -2.02
PHGDHO43175 AC063976.3-201ENST00000426849 329 ntBASIC2.42□□□□□ -2.02
PHGDHO43175 SUMO1P4-201ENST00000429430 302 ntBASIC2.42□□□□□ -2.02
PHGDHO43175 AL353689.1-201ENST00000438895 199 ntBASIC2.42□□□□□ -2.02
PHGDHO43175 SUMO1P2-201ENST00000452524 304 ntBASIC2.42□□□□□ -2.02
PHGDHO43175 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.42□□□□□ -2.02
PHGDHO43175 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.42□□□□□ -2.02
PHGDHO43175 Y_RNA.680-201ENST00000516441 93 ntBASIC2.42□□□□□ -2.02
PHGDHO43175 RNU1-104P-201ENST00000517280 175 ntBASIC2.42□□□□□ -2.02
PHGDHO43175 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.42□□□□□ -2.02
PHGDHO43175 AL049779.4-201ENST00000604500 156 ntBASIC2.42□□□□□ -2.02
PHGDHO43175 AC062037.2-201ENST00000610137 73 ntBASIC2.42□□□□□ -2.02
PHGDHO43175 U2.15-201ENST00000611544 191 ntBASIC2.42□□□□□ -2.02
PHGDHO43175 U2.16-201ENST00000613119 191 ntBASIC2.42□□□□□ -2.02
PHGDHO43175 U2.12-201ENST00000613778 191 ntBASIC2.42□□□□□ -2.02
PHGDHO43175 U2.20-201ENST00000613956 192 ntBASIC2.42□□□□□ -2.02
PHGDHO43175 U2.9-201ENST00000615427 191 ntBASIC2.42□□□□□ -2.02
PHGDHO43175 U2.11-201ENST00000616345 191 ntBASIC2.42□□□□□ -2.02
PHGDHO43175 U2.2-201ENST00000616535 191 ntBASIC2.42□□□□□ -2.02
PHGDHO43175 U2.3-201ENST00000617785 191 ntBASIC2.42□□□□□ -2.02
PHGDHO43175 U2.19-201ENST00000618602 191 ntBASIC2.42□□□□□ -2.02
PHGDHO43175 RNU2-1-201ENST00000618664 191 ntBASIC2.42□□□□□ -2.02
PHGDHO43175 U2.6-201ENST00000619225 191 ntBASIC2.42□□□□□ -2.02
PHGDHO43175 U2.5-201ENST00000619465 191 ntBASIC2.42□□□□□ -2.02
PHGDHO43175 U2.10-201ENST00000620268 191 ntBASIC2.42□□□□□ -2.02
PHGDHO43175 FO624990.1-201ENST00000636373 85 ntBASIC2.42□□□□□ -2.02
PHGDHO43175 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 141 ms