Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 AC093852.1-201ENST00000503587 266 ntBASIC1.66□□□□□ -2.14
SRRM4A7MD48 MTCO2P24-201ENST00000515611 426 ntBASIC1.66□□□□□ -2.14
SRRM4A7MD48 RNU6-1114P-201ENST00000516022 107 ntBASIC1.66□□□□□ -2.14
SRRM4A7MD48 RNU6-635P-201ENST00000516651 102 ntBASIC1.66□□□□□ -2.14
SRRM4A7MD48 RNU1-40P-201ENST00000516816 164 ntBASIC1.66□□□□□ -2.14
SRRM4A7MD48 RNU1-97P-201ENST00000516872 164 ntBASIC1.66□□□□□ -2.14
SRRM4A7MD48 Y_RNA.715-201ENST00000517082 110 ntBASIC1.66□□□□□ -2.14
SRRM4A7MD48 AC091144.1-201ENST00000519573 138 ntBASIC1.66□□□□□ -2.14
SRRM4A7MD48 AC131281.1-201ENST00000522984 164 ntBASIC1.66□□□□□ -2.14
SRRM4A7MD48 IGKV3-31-201ENST00000523109 329 ntBASIC1.66□□□□□ -2.14
SRRM4A7MD48 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.66□□□□□ -2.14
SRRM4A7MD48 AL355297.3-201ENST00000604082 446 ntBASIC1.66□□□□□ -2.14
SRRM4A7MD48 AL353149.1-201ENST00000610667 244 ntBASIC1.66□□□□□ -2.14
SRRM4A7MD48 7SK.10-201ENST00000621414 298 ntBASIC1.66□□□□□ -2.14
SRRM4A7MD48 MIR6873-201ENST00000622788 63 ntBASIC1.66□□□□□ -2.14
SRRM4A7MD48 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
SRRM4A7MD48 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
SRRM4A7MD48 MIR340-201ENST00000362125 95 ntBASIC1.65□□□□□ -2.15
SRRM4A7MD48 Y_RNA.47-201ENST00000362697 108 ntBASIC1.65□□□□□ -2.15
SRRM4A7MD48 RNU6-238P-201ENST00000363313 106 ntBASIC1.65□□□□□ -2.15
SRRM4A7MD48 U3.8-201ENST00000363675 217 ntBASIC1.65□□□□□ -2.15
SRRM4A7MD48 Y_RNA.179-201ENST00000363844 90 ntBASIC1.65□□□□□ -2.15
SRRM4A7MD48 Y_RNA.210-201ENST00000364161 110 ntBASIC1.65□□□□□ -2.15
SRRM4A7MD48 Y_RNA.380-201ENST00000365663 111 ntBASIC1.65□□□□□ -2.15
SRRM4A7MD48 RNU6-196P-201ENST00000384315 107 ntBASIC1.65□□□□□ -2.15
SRRM4A7MD48 SNORA67.3-201ENST00000384366 140 ntBASIC1.65□□□□□ -2.15
SRRM4A7MD48 Y_RNA.512-201ENST00000384518 102 ntBASIC1.65□□□□□ -2.15
SRRM4A7MD48 RNU1-139P-201ENST00000391307 165 ntBASIC1.65□□□□□ -2.15
SRRM4A7MD48 MIR1252-201ENST00000408861 65 ntBASIC1.65□□□□□ -2.15
SRRM4A7MD48 MTCO3P19-201ENST00000415864 321 ntBASIC1.65□□□□□ -2.15
SRRM4A7MD48 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
SRRM4A7MD48 HMGN2P38-201ENST00000423806 265 ntBASIC1.65□□□□□ -2.15
SRRM4A7MD48 AL445305.1-201ENST00000432577 575 ntBASIC1.65□□□□□ -2.15
SRRM4A7MD48 AP000870.1-201ENST00000472927 406 ntBASIC1.65□□□□□ -2.15
SRRM4A7MD48 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.65□□□□□ -2.15
SRRM4A7MD48 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.65□□□□□ -2.15
SRRM4A7MD48 SNORA44.1-201ENST00000517031 108 ntBASIC1.65□□□□□ -2.15
SRRM4A7MD48 SNORD53-201ENST00000579969 78 ntBASIC1.65□□□□□ -2.15
SRRM4A7MD48 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.65□□□□□ -2.15
SRRM4A7MD48 MIR4713-201ENST00000582691 75 ntBASIC1.65□□□□□ -2.15
SRRM4A7MD48 RAC1P9-201ENST00000604990 392 ntBASIC1.65□□□□□ -2.15
SRRM4A7MD48 AL021879.1-201ENST00000611756 288 ntBASIC1.65□□□□□ -2.15
SRRM4A7MD48 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.65□□□□□ -2.15
SRRM4A7MD48 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.65□□□□□ -2.15
SRRM4A7MD48 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.65□□□□□ -2.15
SRRM4A7MD48 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
SRRM4A7MD48 Y_RNA.27-201ENST00000362540 103 ntBASIC1.64□□□□□ -2.15
SRRM4A7MD48 Y_RNA.149-201ENST00000363558 117 ntBASIC1.64□□□□□ -2.15
SRRM4A7MD48 RNU6-873P-201ENST00000363833 107 ntBASIC1.64□□□□□ -2.15
SRRM4A7MD48 RNU4-50P-201ENST00000364361 141 ntBASIC1.64□□□□□ -2.15
SRRM4A7MD48 SNORA72.2-201ENST00000365028 127 ntBASIC1.64□□□□□ -2.15
SRRM4A7MD48 Y_RNA.471-201ENST00000384312 102 ntBASIC1.64□□□□□ -2.15
SRRM4A7MD48 Y_RNA.526-201ENST00000384572 110 ntBASIC1.64□□□□□ -2.15
SRRM4A7MD48 SNORA64-201ENST00000384674 134 ntBASIC1.64□□□□□ -2.15
SRRM4A7MD48 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
SRRM4A7MD48 AL139156.1-201ENST00000412785 841 ntBASIC1.64□□□□□ -2.15
SRRM4A7MD48 AC009310.1-201ENST00000414414 451 ntBASIC1.64□□□□□ -2.15
SRRM4A7MD48 Z98742.3-201ENST00000418637 326 ntBASIC1.64□□□□□ -2.15
SRRM4A7MD48 AL356320.1-201ENST00000429616 163 ntBASIC1.64□□□□□ -2.15
SRRM4A7MD48 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.64□□□□□ -2.15
SRRM4A7MD48 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.64□□□□□ -2.15
SRRM4A7MD48 RNU7-57P-201ENST00000459540 60 ntBASIC1.64□□□□□ -2.15
SRRM4A7MD48 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.64□□□□□ -2.15
SRRM4A7MD48 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.64□□□□□ -2.15
SRRM4A7MD48 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.64□□□□□ -2.15
SRRM4A7MD48 AC008413.1-201ENST00000511864 177 ntBASIC1.64□□□□□ -2.15
SRRM4A7MD48 RNU6-397P-201ENST00000516226 104 ntBASIC1.64□□□□□ -2.15
SRRM4A7MD48 MIR2355-201ENST00000517199 87 ntBASIC1.64□□□□□ -2.15
SRRM4A7MD48 AL442163.3-201ENST00000554110 156 ntBASIC1.64□□□□□ -2.15
SRRM4A7MD48 MIR4503-201ENST00000582187 83 ntBASIC1.64□□□□□ -2.15
SRRM4A7MD48 MIR4435-1-201ENST00000582552 80 ntBASIC1.64□□□□□ -2.15
SRRM4A7MD48 AC002984.1-201ENST00000591692 448 ntBASIC1.64□□□□□ -2.15
SRRM4A7MD48 RPS29P30-201ENST00000600975 111 ntBASIC1.64□□□□□ -2.15
SRRM4A7MD48 AL390123.1-201ENST00000603216 237 ntBASIC1.64□□□□□ -2.15
SRRM4A7MD48 AC069114.2-201ENST00000604699 304 ntBASIC1.64□□□□□ -2.15
SRRM4A7MD48 PRR13P7-201ENST00000605538 430 ntBASIC1.64□□□□□ -2.15
SRRM4A7MD48 snoZ196.1-201ENST00000625269 89 ntBASIC1.64□□□□□ -2.15
SRRM4A7MD48 U6.92-201ENST00000636464 89 ntBASIC1.64□□□□□ -2.15
SRRM4A7MD48 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
SRRM4A7MD48 RNU6-1301P-201ENST00000362724 104 ntBASIC1.63□□□□□ -2.15
SRRM4A7MD48 SNORA63.7-201ENST00000365579 123 ntBASIC1.63□□□□□ -2.15
SRRM4A7MD48 RNU6-418P-201ENST00000384035 107 ntBASIC1.63□□□□□ -2.15
SRRM4A7MD48 Y_RNA.551-201ENST00000384661 102 ntBASIC1.63□□□□□ -2.15
SRRM4A7MD48 Y_RNA.574-201ENST00000384766 95 ntBASIC1.63□□□□□ -2.15
SRRM4A7MD48 MIR549A-201ENST00000385268 96 ntBASIC1.63□□□□□ -2.15
SRRM4A7MD48 RNU6-1109P-201ENST00000391187 107 ntBASIC1.63□□□□□ -2.15
SRRM4A7MD48 CST2P1-201ENST00000425770 87 ntBASIC1.63□□□□□ -2.15
SRRM4A7MD48 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.63□□□□□ -2.15
SRRM4A7MD48 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.63□□□□□ -2.15
SRRM4A7MD48 RPEP5-201ENST00000441137 268 ntBASIC1.63□□□□□ -2.15
SRRM4A7MD48 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.63□□□□□ -2.15
SRRM4A7MD48 AC010469.2-201ENST00000496412 480 ntBASIC1.63□□□□□ -2.15
SRRM4A7MD48 AC022868.1-201ENST00000517767 391 ntBASIC1.63□□□□□ -2.15
SRRM4A7MD48 UBL5P4-201ENST00000562584 236 ntBASIC1.63□□□□□ -2.15
SRRM4A7MD48 MIR3684-201ENST00000579779 74 ntBASIC1.63□□□□□ -2.15
SRRM4A7MD48 MIR5089-201ENST00000580047 84 ntBASIC1.63□□□□□ -2.15
SRRM4A7MD48 AC010999.1-201ENST00000611856 324 ntBASIC1.63□□□□□ -2.15
SRRM4A7MD48 Y_RNA.783-201ENST00000613546 102 ntBASIC1.63□□□□□ -2.15
SRRM4A7MD48 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.63□□□□□ -2.15
SRRM4A7MD48 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms