Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC85CA6NKD9 AC010531.2-201ENST00000465012 153 ntBASIC3.12□□□□□ -1.91
CCDC85CA6NKD9 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.12□□□□□ -1.91
CCDC85CA6NKD9 U2.14-201ENST00000615943 113 ntBASIC3.12□□□□□ -1.91
CCDC85CA6NKD9 AGL-204ENST00000370161 6923 ntTSL 5 BASIC3.12□□□□□ -1.91
CCDC85CA6NKD9 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
CCDC85CA6NKD9 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CCDC85CA6NKD9 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
CCDC85CA6NKD9 MIR340-201ENST00000362125 95 ntBASIC3.11□□□□□ -1.91
CCDC85CA6NKD9 Y_RNA.20-201ENST00000362479 113 ntBASIC3.11□□□□□ -1.91
CCDC85CA6NKD9 AP002088.1-201ENST00000382740 395 ntBASIC3.11□□□□□ -1.91
CCDC85CA6NKD9 Y_RNA.416-201ENST00000384014 113 ntBASIC3.11□□□□□ -1.91
CCDC85CA6NKD9 Y_RNA.476-201ENST00000384347 108 ntBASIC3.11□□□□□ -1.91
CCDC85CA6NKD9 AC007064.1-201ENST00000412238 351 ntBASIC3.11□□□□□ -1.91
CCDC85CA6NKD9 AL356320.1-201ENST00000429616 163 ntBASIC3.11□□□□□ -1.91
CCDC85CA6NKD9 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.11□□□□□ -1.91
CCDC85CA6NKD9 RPL23AP3-201ENST00000453844 468 ntBASIC3.11□□□□□ -1.91
CCDC85CA6NKD9 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.11□□□□□ -1.91
CCDC85CA6NKD9 Y_RNA.680-201ENST00000516441 93 ntBASIC3.11□□□□□ -1.91
CCDC85CA6NKD9 U6.115-201ENST00000636045 103 ntBASIC3.11□□□□□ -1.91
CCDC85CA6NKD9 AC092593.1-201ENST00000515413 1815 ntBASIC3.11□□□□□ -1.91
CCDC85CA6NKD9 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CCDC85CA6NKD9 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
CCDC85CA6NKD9 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.1□□□□□ -1.91
CCDC85CA6NKD9 Y_RNA.99-201ENST00000363138 105 ntBASIC3.1□□□□□ -1.91
CCDC85CA6NKD9 U3.40-201ENST00000408706 208 ntBASIC3.1□□□□□ -1.91
CCDC85CA6NKD9 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.1□□□□□ -1.91
CCDC85CA6NKD9 PRELID3BP1-201ENST00000457142 540 ntBASIC3.1□□□□□ -1.91
CCDC85CA6NKD9 RNU6-436P-201ENST00000516171 114 ntBASIC3.1□□□□□ -1.91
CCDC85CA6NKD9 SNORA31.26-201ENST00000517250 137 ntBASIC3.1□□□□□ -1.91
CCDC85CA6NKD9 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC3.1□□□□□ -1.91
CCDC85CA6NKD9 AC037487.3-201ENST00000606668 112 ntBASIC3.1□□□□□ -1.91
CCDC85CA6NKD9 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CCDC85CA6NKD9 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CCDC85CA6NKD9 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
CCDC85CA6NKD9 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.1□□□□□ -1.91
CCDC85CA6NKD9 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CCDC85CA6NKD9 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.09□□□□□ -1.91
CCDC85CA6NKD9 SNORA25.9-201ENST00000365087 128 ntBASIC3.09□□□□□ -1.91
CCDC85CA6NKD9 RNU6-856P-201ENST00000516959 98 ntBASIC3.09□□□□□ -1.91
CCDC85CA6NKD9 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC3.09□□□□□ -1.91
CCDC85CA6NKD9 MIR3128-201ENST00000581957 66 ntBASIC3.09□□□□□ -1.91
CCDC85CA6NKD9 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC3.09□□□□□ -1.91
CCDC85CA6NKD9 MIR8070-201ENST00000616510 88 ntBASIC3.09□□□□□ -1.91
CCDC85CA6NKD9 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.09□□□□□ -1.92
CCDC85CA6NKD9 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
CCDC85CA6NKD9 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.08□□□□□ -1.92
CCDC85CA6NKD9 UBE2WP1-201ENST00000362030 340 ntBASIC3.08□□□□□ -1.92
CCDC85CA6NKD9 RNU6-379P-201ENST00000363813 104 ntBASIC3.08□□□□□ -1.92
CCDC85CA6NKD9 RNU6-743P-201ENST00000364151 106 ntBASIC3.08□□□□□ -1.92
CCDC85CA6NKD9 RNU6-1072P-201ENST00000384703 107 ntBASIC3.08□□□□□ -1.92
CCDC85CA6NKD9 RNU6-443P-201ENST00000384780 107 ntBASIC3.08□□□□□ -1.92
CCDC85CA6NKD9 AL031003.1-201ENST00000404229 172 ntBASIC3.08□□□□□ -1.92
CCDC85CA6NKD9 EDDM3CP-201ENST00000415977 425 ntBASIC3.08□□□□□ -1.92
CCDC85CA6NKD9 AC008134.1-201ENST00000420943 193 ntBASIC3.08□□□□□ -1.92
CCDC85CA6NKD9 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC3.08□□□□□ -1.92
CCDC85CA6NKD9 MTCO1P5-201ENST00000433573 344 ntBASIC3.08□□□□□ -1.92
CCDC85CA6NKD9 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.08□□□□□ -1.92
CCDC85CA6NKD9 RPPH1-2P-201ENST00000516688 293 ntBASIC3.08□□□□□ -1.92
CCDC85CA6NKD9 AC025647.1-201ENST00000517879 253 ntBASIC3.08□□□□□ -1.92
CCDC85CA6NKD9 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.08□□□□□ -1.92
CCDC85CA6NKD9 MIR4738-201ENST00000579134 87 ntBASIC3.08□□□□□ -1.92
CCDC85CA6NKD9 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC3.08□□□□□ -1.92
CCDC85CA6NKD9 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
CCDC85CA6NKD9 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
CCDC85CA6NKD9 RNU6-847P-201ENST00000411115 108 ntBASIC3.07□□□□□ -1.92
CCDC85CA6NKD9 RNU6-57P-201ENST00000411348 103 ntBASIC3.07□□□□□ -1.92
CCDC85CA6NKD9 MRPS10P1-201ENST00000448483 130 ntBASIC3.07□□□□□ -1.92
CCDC85CA6NKD9 AC016717.1-201ENST00000448918 286 ntBASIC3.07□□□□□ -1.92
CCDC85CA6NKD9 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.07□□□□□ -1.92
CCDC85CA6NKD9 CYCSP26-201ENST00000534107 320 ntBASIC3.07□□□□□ -1.92
CCDC85CA6NKD9 MIR1273D-201ENST00000577266 86 ntBASIC3.07□□□□□ -1.92
CCDC85CA6NKD9 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC3.07□□□□□ -1.92
CCDC85CA6NKD9 AC006435.5-201ENST00000624486 112 ntBASIC3.07□□□□□ -1.92
CCDC85CA6NKD9 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
CCDC85CA6NKD9 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
CCDC85CA6NKD9 AL356292.1-201ENST00000283110 373 ntBASIC3.06□□□□□ -1.92
CCDC85CA6NKD9 SNORA25.1-201ENST00000362326 128 ntBASIC3.06□□□□□ -1.92
CCDC85CA6NKD9 Y_RNA.60-201ENST00000362831 98 ntBASIC3.06□□□□□ -1.92
CCDC85CA6NKD9 RNU6-418P-201ENST00000384035 107 ntBASIC3.06□□□□□ -1.92
CCDC85CA6NKD9 RNU2-61P-201ENST00000411069 191 ntBASIC3.06□□□□□ -1.92
CCDC85CA6NKD9 AC016909.1-201ENST00000415916 166 ntBASIC3.06□□□□□ -1.92
CCDC85CA6NKD9 RNU1-131P-201ENST00000458943 161 ntBASIC3.06□□□□□ -1.92
CCDC85CA6NKD9 RNU7-26P-201ENST00000458980 63 ntBASIC3.06□□□□□ -1.92
CCDC85CA6NKD9 RNU6-794P-201ENST00000517261 64 ntBASIC3.06□□□□□ -1.92
CCDC85CA6NKD9 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.06□□□□□ -1.92
CCDC85CA6NKD9 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC3.06□□□□□ -1.92
CCDC85CA6NKD9 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
CCDC85CA6NKD9 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.05□□□□□ -1.92
CCDC85CA6NKD9 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
CCDC85CA6NKD9 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.05□□□□□ -1.92
CCDC85CA6NKD9 Y_RNA.329-201ENST00000365209 107 ntBASIC3.05□□□□□ -1.92
CCDC85CA6NKD9 RNU6-1248P-201ENST00000391096 64 ntBASIC3.05□□□□□ -1.92
CCDC85CA6NKD9 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC3.05□□□□□ -1.92
CCDC85CA6NKD9 SCARNA24.2-201ENST00000516968 130 ntBASIC3.05□□□□□ -1.92
CCDC85CA6NKD9 BX284668.6-201ENST00000606899 438 ntBASIC3.05□□□□□ -1.92
CCDC85CA6NKD9 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CCDC85CA6NKD9 Y_RNA.44-201ENST00000362676 108 ntBASIC3.04□□□□□ -1.92
CCDC85CA6NKD9 RNU6-1266P-201ENST00000362794 105 ntBASIC3.04□□□□□ -1.92
CCDC85CA6NKD9 RNA5SP325-201ENST00000363756 130 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms