Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.67□□□□□ -1.98
SSX2IPQ9Y2D8 AP001282.2-201ENST00000616149 309 ntBASIC2.67□□□□□ -1.98
SSX2IPQ9Y2D8 MIR5739-201ENST00000619803 80 ntBASIC2.67□□□□□ -1.98
SSX2IPQ9Y2D8 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.67□□□□□ -1.98
SSX2IPQ9Y2D8 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
SSX2IPQ9Y2D8 AC080128.1-201ENST00000474389 1917 ntBASIC2.67□□□□□ -1.98
SSX2IPQ9Y2D8 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
SSX2IPQ9Y2D8 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
SSX2IPQ9Y2D8 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
SSX2IPQ9Y2D8 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
SSX2IPQ9Y2D8 AL391987.6-201ENST00000305671 199 ntBASIC2.66□□□□□ -1.98
SSX2IPQ9Y2D8 RNU1-72P-201ENST00000362976 153 ntBASIC2.66□□□□□ -1.98
SSX2IPQ9Y2D8 SNORA72.2-201ENST00000365028 127 ntBASIC2.66□□□□□ -1.98
SSX2IPQ9Y2D8 RNU6-21P-201ENST00000384710 107 ntBASIC2.66□□□□□ -1.98
SSX2IPQ9Y2D8 Y_RNA.570-201ENST00000384750 101 ntBASIC2.66□□□□□ -1.98
SSX2IPQ9Y2D8 MIR518C-201ENST00000384822 101 ntBASIC2.66□□□□□ -1.98
SSX2IPQ9Y2D8 SNORA3.2-201ENST00000408221 125 ntBASIC2.66□□□□□ -1.98
SSX2IPQ9Y2D8 RNU6-847P-201ENST00000411115 108 ntBASIC2.66□□□□□ -1.98
SSX2IPQ9Y2D8 ELOCP21-201ENST00000412558 336 ntBASIC2.66□□□□□ -1.98
SSX2IPQ9Y2D8 RPL23AP36-201ENST00000413895 458 ntBASIC2.66□□□□□ -1.98
SSX2IPQ9Y2D8 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.66□□□□□ -1.98
SSX2IPQ9Y2D8 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.66□□□□□ -1.98
SSX2IPQ9Y2D8 AC139712.2-201ENST00000424302 339 ntBASIC2.66□□□□□ -1.98
SSX2IPQ9Y2D8 AL445687.1-201ENST00000439946 251 ntBASIC2.66□□□□□ -1.98
SSX2IPQ9Y2D8 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.66□□□□□ -1.98
SSX2IPQ9Y2D8 RNU7-110P-201ENST00000516891 62 ntBASIC2.66□□□□□ -1.98
SSX2IPQ9Y2D8 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.66□□□□□ -1.98
SSX2IPQ9Y2D8 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.66□□□□□ -1.98
SSX2IPQ9Y2D8 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.66□□□□□ -1.98
SSX2IPQ9Y2D8 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.66□□□□□ -1.98
SSX2IPQ9Y2D8 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.66□□□□□ -1.98
SSX2IPQ9Y2D8 MIR6895-201ENST00000613497 78 ntBASIC2.66□□□□□ -1.98
SSX2IPQ9Y2D8 SDR42E1P4-201ENST00000620894 481 ntBASIC2.66□□□□□ -1.98
SSX2IPQ9Y2D8 MIR7843-201ENST00000622274 79 ntBASIC2.66□□□□□ -1.98
SSX2IPQ9Y2D8 MIR203B-201ENST00000636080 86 ntBASIC2.66□□□□□ -1.98
SSX2IPQ9Y2D8 AC068205.3-201ENST00000636385 468 ntBASIC2.66□□□□□ -1.98
SSX2IPQ9Y2D8 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.66□□□□□ -1.98
SSX2IPQ9Y2D8 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
SSX2IPQ9Y2D8 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.66□□□□□ -1.98
SSX2IPQ9Y2D8 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.65□□□□□ -1.98
SSX2IPQ9Y2D8 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.65□□□□□ -1.99
SSX2IPQ9Y2D8 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
SSX2IPQ9Y2D8 RNA5SP456-201ENST00000364002 114 ntBASIC2.65□□□□□ -1.99
SSX2IPQ9Y2D8 RNU6-1175P-201ENST00000365200 107 ntBASIC2.65□□□□□ -1.99
SSX2IPQ9Y2D8 RNU6-290P-201ENST00000365212 101 ntBASIC2.65□□□□□ -1.99
SSX2IPQ9Y2D8 Y_RNA.478-201ENST00000384358 107 ntBASIC2.65□□□□□ -1.99
SSX2IPQ9Y2D8 RNU6-1274P-201ENST00000384557 107 ntBASIC2.65□□□□□ -1.99
SSX2IPQ9Y2D8 Y_RNA.541-201ENST00000384640 113 ntBASIC2.65□□□□□ -1.99
SSX2IPQ9Y2D8 AC004866.1-201ENST00000411748 78 ntBASIC2.65□□□□□ -1.99
SSX2IPQ9Y2D8 RAB28P5-201ENST00000427490 651 ntBASIC2.65□□□□□ -1.99
SSX2IPQ9Y2D8 AC023141.11-201ENST00000508864 202 ntBASIC2.65□□□□□ -1.99
SSX2IPQ9Y2D8 MIR3117-201ENST00000584034 78 ntBASIC2.65□□□□□ -1.99
SSX2IPQ9Y2D8 AC012433.1-201ENST00000588916 398 ntBASIC2.65□□□□□ -1.99
SSX2IPQ9Y2D8 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.65□□□□□ -1.99
SSX2IPQ9Y2D8 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
SSX2IPQ9Y2D8 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.65□□□□□ -1.99
SSX2IPQ9Y2D8 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
SSX2IPQ9Y2D8 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
SSX2IPQ9Y2D8 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
SSX2IPQ9Y2D8 MIR410-201ENST00000362222 80 ntBASIC2.64□□□□□ -1.99
SSX2IPQ9Y2D8 RNU6-379P-201ENST00000363813 104 ntBASIC2.64□□□□□ -1.99
SSX2IPQ9Y2D8 Y_RNA.237-201ENST00000364439 102 ntBASIC2.64□□□□□ -1.99
SSX2IPQ9Y2D8 Y_RNA.415-201ENST00000384012 112 ntBASIC2.64□□□□□ -1.99
SSX2IPQ9Y2D8 MIR548H3-201ENST00000408771 118 ntBASIC2.64□□□□□ -1.99
SSX2IPQ9Y2D8 RNA5SP475-201ENST00000410568 110 ntBASIC2.64□□□□□ -1.99
SSX2IPQ9Y2D8 Z98742.3-201ENST00000418637 326 ntBASIC2.64□□□□□ -1.99
SSX2IPQ9Y2D8 RPS12P2-201ENST00000439728 269 ntBASIC2.64□□□□□ -1.99
SSX2IPQ9Y2D8 CYP2C59P-201ENST00000457790 269 ntBASIC2.64□□□□□ -1.99
SSX2IPQ9Y2D8 RNU6-1338P-201ENST00000516328 91 ntBASIC2.64□□□□□ -1.99
SSX2IPQ9Y2D8 RNU5F-4P-201ENST00000516581 114 ntBASIC2.64□□□□□ -1.99
SSX2IPQ9Y2D8 RNU6-794P-201ENST00000517261 64 ntBASIC2.64□□□□□ -1.99
SSX2IPQ9Y2D8 DEFB108E-201ENST00000524692 240 ntBASIC2.64□□□□□ -1.99
SSX2IPQ9Y2D8 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.64□□□□□ -1.99
SSX2IPQ9Y2D8 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.64□□□□□ -1.99
SSX2IPQ9Y2D8 AL356280.1-201ENST00000603614 379 ntBASIC2.64□□□□□ -1.99
SSX2IPQ9Y2D8 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.64□□□□□ -1.99
SSX2IPQ9Y2D8 MIR3674-201ENST00000636576 68 ntBASIC2.64□□□□□ -1.99
SSX2IPQ9Y2D8 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.64□□□□□ -1.99
SSX2IPQ9Y2D8 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.64□□□□□ -1.99
SSX2IPQ9Y2D8 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
SSX2IPQ9Y2D8 RNU6-1318P-201ENST00000365389 103 ntBASIC2.63□□□□□ -1.99
SSX2IPQ9Y2D8 RNU6-1264P-201ENST00000383891 107 ntBASIC2.63□□□□□ -1.99
SSX2IPQ9Y2D8 MIR524-201ENST00000385242 87 ntBASIC2.63□□□□□ -1.99
SSX2IPQ9Y2D8 SNORA53-201ENST00000391141 249 ntBASIC2.63□□□□□ -1.99
SSX2IPQ9Y2D8 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.63□□□□□ -1.99
SSX2IPQ9Y2D8 RNU4-30P-201ENST00000410245 143 ntBASIC2.63□□□□□ -1.99
SSX2IPQ9Y2D8 NDUFB4P10-201ENST00000452541 359 ntBASIC2.63□□□□□ -1.99
SSX2IPQ9Y2D8 HSPE1P25-201ENST00000455484 251 ntBASIC2.63□□□□□ -1.99
SSX2IPQ9Y2D8 snoU13.26-201ENST00000459452 105 ntBASIC2.63□□□□□ -1.99
SSX2IPQ9Y2D8 CKS1BP2-201ENST00000497342 240 ntBASIC2.63□□□□□ -1.99
SSX2IPQ9Y2D8 AC234781.5-201ENST00000508429 271 ntBASIC2.63□□□□□ -1.99
SSX2IPQ9Y2D8 AC107222.1-201ENST00000510899 637 ntBASIC2.63□□□□□ -1.99
SSX2IPQ9Y2D8 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.63□□□□□ -1.99
SSX2IPQ9Y2D8 RNU6-1023P-201ENST00000516137 106 ntBASIC2.63□□□□□ -1.99
SSX2IPQ9Y2D8 RNU6-107P-201ENST00000516643 102 ntBASIC2.63□□□□□ -1.99
SSX2IPQ9Y2D8 IGLV3-17-201ENST00000519099 244 ntBASIC2.63□□□□□ -1.99
SSX2IPQ9Y2D8 AC018630.3-201ENST00000542637 96 ntBASIC2.63□□□□□ -1.99
SSX2IPQ9Y2D8 AC121758.2-201ENST00000553271 193 ntBASIC2.63□□□□□ -1.99
SSX2IPQ9Y2D8 MIR3128-201ENST00000581957 66 ntBASIC2.63□□□□□ -1.99
SSX2IPQ9Y2D8 AC022441.3-201ENST00000605737 136 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 184.7 ms