Protein–RNA interactions for Protein: Q9UPZ3

HPS5, Hermansky-Pudlak syndrome 5 protein, humanhuman

Predictions only

Length 1,129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5Q9UPZ3 RNU6-1098P-201ENST00000516772 96 ntBASIC4.5□□□□□ -1.69
HPS5Q9UPZ3 RNU6-1270P-201ENST00000517128 108 ntBASIC4.5□□□□□ -1.69
HPS5Q9UPZ3 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.5□□□□□ -1.69
HPS5Q9UPZ3 MIR4666B-201ENST00000578142 81 ntBASIC4.5□□□□□ -1.69
HPS5Q9UPZ3 AC104984.5-201ENST00000586878 94 ntBASIC4.5□□□□□ -1.69
HPS5Q9UPZ3 AC012493.2-201ENST00000595083 291 ntBASIC4.5□□□□□ -1.69
HPS5Q9UPZ3 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.5□□□□□ -1.69
HPS5Q9UPZ3 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HPS5Q9UPZ3 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.49□□□□□ -1.69
HPS5Q9UPZ3 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
HPS5Q9UPZ3 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
HPS5Q9UPZ3 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
HPS5Q9UPZ3 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HPS5Q9UPZ3 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
HPS5Q9UPZ3 snoU2_19.1-201ENST00000362361 80 ntBASIC4.49□□□□□ -1.69
HPS5Q9UPZ3 RNU6-655P-201ENST00000362858 107 ntBASIC4.49□□□□□ -1.69
HPS5Q9UPZ3 RNA5SP50-201ENST00000363731 107 ntBASIC4.49□□□□□ -1.69
HPS5Q9UPZ3 Y_RNA.313-201ENST00000365095 103 ntBASIC4.49□□□□□ -1.69
HPS5Q9UPZ3 SNORD24-201ENST00000383884 75 ntBASIC4.49□□□□□ -1.69
HPS5Q9UPZ3 RNU6-24P-201ENST00000384440 107 ntBASIC4.49□□□□□ -1.69
HPS5Q9UPZ3 RPL21P3-201ENST00000395517 478 ntBASIC4.49□□□□□ -1.69
HPS5Q9UPZ3 MIR1283-1-201ENST00000408494 87 ntBASIC4.49□□□□□ -1.69
HPS5Q9UPZ3 AL353689.1-201ENST00000438895 199 ntBASIC4.49□□□□□ -1.69
HPS5Q9UPZ3 SNORD108-201ENST00000459332 71 ntBASIC4.49□□□□□ -1.69
HPS5Q9UPZ3 RNU7-61P-201ENST00000515897 61 ntBASIC4.49□□□□□ -1.69
HPS5Q9UPZ3 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC4.49□□□□□ -1.69
HPS5Q9UPZ3 AL360157.1-201ENST00000565962 87 ntBASIC4.49□□□□□ -1.69
HPS5Q9UPZ3 AC244505.7-201ENST00000599675 272 ntBASIC4.49□□□□□ -1.69
HPS5Q9UPZ3 HOTTIP_4.1-201ENST00000618195 165 ntBASIC4.49□□□□□ -1.69
HPS5Q9UPZ3 AC006435.5-201ENST00000624486 112 ntBASIC4.49□□□□□ -1.69
HPS5Q9UPZ3 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.49□□□□□ -1.69
HPS5Q9UPZ3 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC4.49□□□□□ -1.69
HPS5Q9UPZ3 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
HPS5Q9UPZ3 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.49□□□□□ -1.69
HPS5Q9UPZ3 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HPS5Q9UPZ3 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
HPS5Q9UPZ3 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.48□□□□□ -1.69
HPS5Q9UPZ3 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.48□□□□□ -1.69
HPS5Q9UPZ3 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
HPS5Q9UPZ3 RNA5SP502-201ENST00000362694 119 ntBASIC4.48□□□□□ -1.69
HPS5Q9UPZ3 RNA5SP51-201ENST00000364750 119 ntBASIC4.48□□□□□ -1.69
HPS5Q9UPZ3 AC097462.1-201ENST00000514125 324 ntBASIC4.48□□□□□ -1.69
HPS5Q9UPZ3 RNU5F-4P-201ENST00000516581 114 ntBASIC4.48□□□□□ -1.69
HPS5Q9UPZ3 AC011602.1-201ENST00000546484 331 ntBASIC4.48□□□□□ -1.69
HPS5Q9UPZ3 EIF4BP1-201ENST00000554881 351 ntBASIC4.48□□□□□ -1.69
HPS5Q9UPZ3 MIR5588-201ENST00000581890 63 ntBASIC4.48□□□□□ -1.69
HPS5Q9UPZ3 JPX_2.1-201ENST00000614161 69 ntBASIC4.48□□□□□ -1.69
HPS5Q9UPZ3 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.48□□□□□ -1.69
HPS5Q9UPZ3 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.48□□□□□ -1.69
HPS5Q9UPZ3 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HPS5Q9UPZ3 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HPS5Q9UPZ3 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HPS5Q9UPZ3 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HPS5Q9UPZ3 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
HPS5Q9UPZ3 SNORA38.1-201ENST00000364172 131 ntBASIC4.47□□□□□ -1.69
HPS5Q9UPZ3 MIR300-201ENST00000401138 83 ntBASIC4.47□□□□□ -1.69
HPS5Q9UPZ3 Y_RNA.601-201ENST00000410500 113 ntBASIC4.47□□□□□ -1.69
HPS5Q9UPZ3 TRBV12-2-201ENST00000489763 344 ntBASIC4.47□□□□□ -1.69
HPS5Q9UPZ3 MRPS17P9-201ENST00000511924 393 ntBASIC4.47□□□□□ -1.69
HPS5Q9UPZ3 SNORD19.2-201ENST00000516978 73 ntBASIC4.47□□□□□ -1.69
HPS5Q9UPZ3 HMGN2P15-201ENST00000585707 270 ntBASIC4.47□□□□□ -1.69
HPS5Q9UPZ3 AL137849.1-201ENST00000604767 169 ntBASIC4.47□□□□□ -1.69
HPS5Q9UPZ3 SNORA62.6-201ENST00000606322 83 ntBASIC4.47□□□□□ -1.69
HPS5Q9UPZ3 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
HPS5Q9UPZ3 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HPS5Q9UPZ3 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
HPS5Q9UPZ3 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
HPS5Q9UPZ3 SNORA7.2-201ENST00000364446 145 ntBASIC4.46□□□□□ -1.7
HPS5Q9UPZ3 RNU6-1240P-201ENST00000365155 104 ntBASIC4.46□□□□□ -1.7
HPS5Q9UPZ3 RNU6-690P-201ENST00000365242 106 ntBASIC4.46□□□□□ -1.7
HPS5Q9UPZ3 MIR1912-201ENST00000410389 80 ntBASIC4.46□□□□□ -1.7
HPS5Q9UPZ3 RNU6-57P-201ENST00000411348 103 ntBASIC4.46□□□□□ -1.7
HPS5Q9UPZ3 RNU7-171P-201ENST00000459581 62 ntBASIC4.46□□□□□ -1.7
HPS5Q9UPZ3 AC011604.1-201ENST00000545978 196 ntBASIC4.46□□□□□ -1.7
HPS5Q9UPZ3 MIR5187-201ENST00000583479 76 ntBASIC4.46□□□□□ -1.7
HPS5Q9UPZ3 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC4.46□□□□□ -1.7
HPS5Q9UPZ3 MIR6715A-201ENST00000615929 79 ntBASIC4.46□□□□□ -1.7
HPS5Q9UPZ3 U7.3-201ENST00000616123 62 ntBASIC4.46□□□□□ -1.7
HPS5Q9UPZ3 MIR376A2-201ENST00000636782 80 ntBASIC4.46□□□□□ -1.7
HPS5Q9UPZ3 MIR4662A-201ENST00000637499 67 ntBASIC4.46□□□□□ -1.7
HPS5Q9UPZ3 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
HPS5Q9UPZ3 LINC02471-203ENST00000641941 4752 ntBASIC4.46□□□□□ -1.7
HPS5Q9UPZ3 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
HPS5Q9UPZ3 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.46□□□□□ -1.7
HPS5Q9UPZ3 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
HPS5Q9UPZ3 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HPS5Q9UPZ3 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
HPS5Q9UPZ3 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HPS5Q9UPZ3 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC4.45□□□□□ -1.7
HPS5Q9UPZ3 SNORD32B-201ENST00000364460 84 ntBASIC4.45□□□□□ -1.7
HPS5Q9UPZ3 Y_RNA.298-201ENST00000364960 107 ntBASIC4.45□□□□□ -1.7
HPS5Q9UPZ3 MIR548A2-201ENST00000384956 97 ntBASIC4.45□□□□□ -1.7
HPS5Q9UPZ3 AL451046.2-201ENST00000403074 277 ntBASIC4.45□□□□□ -1.7
HPS5Q9UPZ3 NDUFA4P2-201ENST00000489989 244 ntBASIC4.45□□□□□ -1.7
HPS5Q9UPZ3 RNU6ATAC12P-201ENST00000516542 115 ntBASIC4.45□□□□□ -1.7
HPS5Q9UPZ3 MIR5197-201ENST00000583721 112 ntBASIC4.45□□□□□ -1.7
HPS5Q9UPZ3 MIR4753-201ENST00000585119 83 ntBASIC4.45□□□□□ -1.7
HPS5Q9UPZ3 YPEL5P2-201ENST00000605553 359 ntBASIC4.45□□□□□ -1.7
HPS5Q9UPZ3 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
HPS5Q9UPZ3 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms