Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CDC42EP3Q9UKI2 Y_RNA.182-201ENST00000363880 111 ntBASIC2.82□□□□□ -1.96
CDC42EP3Q9UKI2 RNA5SP42-201ENST00000364278 115 ntBASIC2.82□□□□□ -1.96
CDC42EP3Q9UKI2 RNU6-1027P-201ENST00000383998 107 ntBASIC2.82□□□□□ -1.96
CDC42EP3Q9UKI2 SNORA8.3-201ENST00000384679 139 ntBASIC2.82□□□□□ -1.96
CDC42EP3Q9UKI2 MIR95-201ENST00000385072 81 ntBASIC2.82□□□□□ -1.96
CDC42EP3Q9UKI2 RNU1-101P-201ENST00000391171 127 ntBASIC2.82□□□□□ -1.96
CDC42EP3Q9UKI2 MIR548I2-201ENST00000408348 149 ntBASIC2.82□□□□□ -1.96
CDC42EP3Q9UKI2 DBIP2-201ENST00000419076 262 ntBASIC2.82□□□□□ -1.96
CDC42EP3Q9UKI2 AL121890.1-201ENST00000435457 205 ntBASIC2.82□□□□□ -1.96
CDC42EP3Q9UKI2 AC074290.1-201ENST00000448883 135 ntBASIC2.82□□□□□ -1.96
CDC42EP3Q9UKI2 AC080013.2-201ENST00000460866 323 ntBASIC2.82□□□□□ -1.96
CDC42EP3Q9UKI2 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.82□□□□□ -1.96
CDC42EP3Q9UKI2 IGKV2-26-201ENST00000518305 343 ntBASIC2.82□□□□□ -1.96
CDC42EP3Q9UKI2 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.82□□□□□ -1.96
CDC42EP3Q9UKI2 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.82□□□□□ -1.96
CDC42EP3Q9UKI2 AC023043.3-201ENST00000593113 385 ntBASIC2.82□□□□□ -1.96
CDC42EP3Q9UKI2 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.82□□□□□ -1.96
CDC42EP3Q9UKI2 Y_RNA.802-201ENST00000614892 130 ntBASIC2.82□□□□□ -1.96
CDC42EP3Q9UKI2 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CDC42EP3Q9UKI2 MTND1P7-201ENST00000632801 297 ntBASIC2.82□□□□□ -1.96
CDC42EP3Q9UKI2 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.82□□□□□ -1.96
CDC42EP3Q9UKI2 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.82□□□□□ -1.96
CDC42EP3Q9UKI2 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CDC42EP3Q9UKI2 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC2.82□□□□□ -1.96
CDC42EP3Q9UKI2 MFSD8-233ENST00000641482 4860 ntBASIC2.81□□□□□ -1.96
CDC42EP3Q9UKI2 MIR422A-201ENST00000362286 90 ntBASIC2.81□□□□□ -1.96
CDC42EP3Q9UKI2 SNORA27.1-201ENST00000362604 124 ntBASIC2.81□□□□□ -1.96
CDC42EP3Q9UKI2 Y_RNA.124-201ENST00000363339 93 ntBASIC2.81□□□□□ -1.96
CDC42EP3Q9UKI2 Y_RNA.172-201ENST00000363765 102 ntBASIC2.81□□□□□ -1.96
CDC42EP3Q9UKI2 RNA5SP240-201ENST00000365355 128 ntBASIC2.81□□□□□ -1.96
CDC42EP3Q9UKI2 RNU6-1130P-201ENST00000365434 107 ntBASIC2.81□□□□□ -1.96
CDC42EP3Q9UKI2 RNU6-144P-201ENST00000383951 107 ntBASIC2.81□□□□□ -1.96
CDC42EP3Q9UKI2 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
CDC42EP3Q9UKI2 RPS20P10-201ENST00000451209 253 ntBASIC2.81□□□□□ -1.96
CDC42EP3Q9UKI2 SNORD65B-201ENST00000459126 73 ntBASIC2.81□□□□□ -1.96
CDC42EP3Q9UKI2 RPL36AP21-201ENST00000490372 323 ntBASIC2.81□□□□□ -1.96
CDC42EP3Q9UKI2 AC010598.1-201ENST00000510378 103 ntBASIC2.81□□□□□ -1.96
CDC42EP3Q9UKI2 RNA5SP385-201ENST00000515947 110 ntBASIC2.81□□□□□ -1.96
CDC42EP3Q9UKI2 RNU4ATAC3P-201ENST00000516699 126 ntBASIC2.81□□□□□ -1.96
CDC42EP3Q9UKI2 MIR4744-201ENST00000581563 82 ntBASIC2.81□□□□□ -1.96
CDC42EP3Q9UKI2 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CDC42EP3Q9UKI2 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
CDC42EP3Q9UKI2 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
CDC42EP3Q9UKI2 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CDC42EP3Q9UKI2 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC2.8□□□□□ -1.96
CDC42EP3Q9UKI2 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.8□□□□□ -1.96
CDC42EP3Q9UKI2 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.8□□□□□ -1.96
CDC42EP3Q9UKI2 MIR30E-201ENST00000362104 92 ntBASIC2.8□□□□□ -1.96
CDC42EP3Q9UKI2 SNORA80A-201ENST00000363922 136 ntBASIC2.8□□□□□ -1.96
CDC42EP3Q9UKI2 RNU4-10P-201ENST00000364383 140 ntBASIC2.8□□□□□ -1.96
CDC42EP3Q9UKI2 RNU6-81P-201ENST00000365608 104 ntBASIC2.8□□□□□ -1.96
CDC42EP3Q9UKI2 EBAG9P1-201ENST00000418955 543 ntBASIC2.8□□□□□ -1.96
CDC42EP3Q9UKI2 SEPT7P4-201ENST00000437076 306 ntBASIC2.8□□□□□ -1.96
CDC42EP3Q9UKI2 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.8□□□□□ -1.96
CDC42EP3Q9UKI2 RNU6-948P-201ENST00000516374 107 ntBASIC2.8□□□□□ -1.96
CDC42EP3Q9UKI2 RNU7-121P-201ENST00000516604 62 ntBASIC2.8□□□□□ -1.96
CDC42EP3Q9UKI2 AC105245.1-201ENST00000581934 244 ntBASIC2.8□□□□□ -1.96
CDC42EP3Q9UKI2 AC093732.2-201ENST00000607950 274 ntBASIC2.8□□□□□ -1.96
CDC42EP3Q9UKI2 AC069294.1-201ENST00000608397 350 ntBASIC2.8□□□□□ -1.96
CDC42EP3Q9UKI2 MIR6715A-201ENST00000615929 79 ntBASIC2.8□□□□□ -1.96
CDC42EP3Q9UKI2 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.8□□□□□ -1.96
CDC42EP3Q9UKI2 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC2.8□□□□□ -1.96
CDC42EP3Q9UKI2 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.8□□□□□ -1.96
CDC42EP3Q9UKI2 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.8□□□□□ -1.96
CDC42EP3Q9UKI2 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC2.8□□□□□ -1.96
CDC42EP3Q9UKI2 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.8□□□□□ -1.96
CDC42EP3Q9UKI2 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.8□□□□□ -1.96
CDC42EP3Q9UKI2 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.8□□□□□ -1.96
CDC42EP3Q9UKI2 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CDC42EP3Q9UKI2 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
CDC42EP3Q9UKI2 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CDC42EP3Q9UKI2 AC068647.1-201ENST00000489539 2265 ntBASIC2.79□□□□□ -1.96
CDC42EP3Q9UKI2 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.79□□□□□ -1.96
CDC42EP3Q9UKI2 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CDC42EP3Q9UKI2 Y_RNA.293-201ENST00000364908 93 ntBASIC2.79□□□□□ -1.96
CDC42EP3Q9UKI2 MIR616-201ENST00000385293 97 ntBASIC2.79□□□□□ -1.96
CDC42EP3Q9UKI2 RNU6-578P-201ENST00000390980 103 ntBASIC2.79□□□□□ -1.96
CDC42EP3Q9UKI2 AC025750.2-201ENST00000442609 450 ntBASIC2.79□□□□□ -1.96
CDC42EP3Q9UKI2 AC090515.1-201ENST00000465295 476 ntBASIC2.79□□□□□ -1.96
CDC42EP3Q9UKI2 RPS26P55-201ENST00000471178 356 ntBASIC2.79□□□□□ -1.96
CDC42EP3Q9UKI2 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.79□□□□□ -1.96
CDC42EP3Q9UKI2 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.79□□□□□ -1.96
CDC42EP3Q9UKI2 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.79□□□□□ -1.96
CDC42EP3Q9UKI2 SCARNA8-201ENST00000515924 131 ntBASIC2.79□□□□□ -1.96
CDC42EP3Q9UKI2 Y_RNA.797-201ENST00000515977 94 ntBASIC2.79□□□□□ -1.96
CDC42EP3Q9UKI2 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.79□□□□□ -1.96
CDC42EP3Q9UKI2 AC006023.1-201ENST00000603944 259 ntBASIC2.79□□□□□ -1.96
CDC42EP3Q9UKI2 AC004832.4-201ENST00000608952 331 ntBASIC2.79□□□□□ -1.96
CDC42EP3Q9UKI2 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.79□□□□□ -1.96
CDC42EP3Q9UKI2 AC006435.5-201ENST00000624486 112 ntBASIC2.79□□□□□ -1.96
CDC42EP3Q9UKI2 MIR1248-201ENST00000629190 106 ntBASIC2.79□□□□□ -1.96
CDC42EP3Q9UKI2 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.79□□□□□ -1.96
CDC42EP3Q9UKI2 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.79□□□□□ -1.96
CDC42EP3Q9UKI2 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
CDC42EP3Q9UKI2 AC080128.1-201ENST00000474389 1917 ntBASIC2.78□□□□□ -1.96
CDC42EP3Q9UKI2 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.78□□□□□ -1.96
CDC42EP3Q9UKI2 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
CDC42EP3Q9UKI2 MIR148B-201ENST00000362252 99 ntBASIC2.78□□□□□ -1.96
CDC42EP3Q9UKI2 RNU6-1205P-201ENST00000363625 106 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms