Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CNTN3Q9P232 MIR30E-201ENST00000362104 92 ntBASIC3.62□□□□□ -1.83
CNTN3Q9P232 RNU6-834P-201ENST00000362367 110 ntBASIC3.62□□□□□ -1.83
CNTN3Q9P232 RNU6-674P-201ENST00000363831 107 ntBASIC3.62□□□□□ -1.83
CNTN3Q9P232 RNU6-768P-201ENST00000384683 107 ntBASIC3.62□□□□□ -1.83
CNTN3Q9P232 BX510359.1-201ENST00000456973 237 ntBASIC3.62□□□□□ -1.83
CNTN3Q9P232 AC092991.1-201ENST00000477176 376 ntBASIC3.62□□□□□ -1.83
CNTN3Q9P232 MRPS36P2-201ENST00000512569 299 ntBASIC3.62□□□□□ -1.83
CNTN3Q9P232 RNU4-57P-201ENST00000515980 135 ntBASIC3.62□□□□□ -1.83
CNTN3Q9P232 MIR5195-201ENST00000583555 115 ntBASIC3.62□□□□□ -1.83
CNTN3Q9P232 AC011603.4-201ENST00000611325 277 ntBASIC3.62□□□□□ -1.83
CNTN3Q9P232 MIR7112-201ENST00000616126 65 ntBASIC3.62□□□□□ -1.83
CNTN3Q9P232 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CNTN3Q9P232 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.62□□□□□ -1.83
CNTN3Q9P232 Z82209.1-201ENST00000422141 2135 ntBASIC3.62□□□□□ -1.83
CNTN3Q9P232 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.62□□□□□ -1.83
CNTN3Q9P232 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CNTN3Q9P232 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
CNTN3Q9P232 SNORD116-13-201ENST00000384408 92 ntBASIC3.61□□□□□ -1.83
CNTN3Q9P232 SNORA75.5-201ENST00000391291 81 ntBASIC3.61□□□□□ -1.83
CNTN3Q9P232 AL135786.1-201ENST00000415892 214 ntBASIC3.61□□□□□ -1.83
CNTN3Q9P232 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.61□□□□□ -1.83
CNTN3Q9P232 RNU6-437P-201ENST00000459408 95 ntBASIC3.61□□□□□ -1.83
CNTN3Q9P232 RPL23AP67-201ENST00000465341 474 ntBASIC3.61□□□□□ -1.83
CNTN3Q9P232 AC021205.2-201ENST00000480069 347 ntBASIC3.61□□□□□ -1.83
CNTN3Q9P232 RNA5SP20-201ENST00000515976 84 ntBASIC3.61□□□□□ -1.83
CNTN3Q9P232 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.61□□□□□ -1.83
CNTN3Q9P232 AP001328.1-201ENST00000528550 176 ntBASIC3.61□□□□□ -1.83
CNTN3Q9P232 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.61□□□□□ -1.83
CNTN3Q9P232 YPEL5P2-201ENST00000605553 359 ntBASIC3.61□□□□□ -1.83
CNTN3Q9P232 MIR3651-201ENST00000630427 90 ntBASIC3.61□□□□□ -1.83
CNTN3Q9P232 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.61□□□□□ -1.83
CNTN3Q9P232 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CNTN3Q9P232 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.61□□□□□ -1.83
CNTN3Q9P232 AC092435.3-201ENST00000565538 3654 ntBASIC3.6□□□□□ -1.83
CNTN3Q9P232 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.6□□□□□ -1.83
CNTN3Q9P232 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CNTN3Q9P232 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CNTN3Q9P232 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CNTN3Q9P232 RNU6-597P-201ENST00000365620 102 ntBASIC3.6□□□□□ -1.83
CNTN3Q9P232 SNORD14D-201ENST00000384390 87 ntBASIC3.6□□□□□ -1.83
CNTN3Q9P232 MIR1278-201ENST00000408753 81 ntBASIC3.6□□□□□ -1.83
CNTN3Q9P232 RNU2-55P-201ENST00000411146 174 ntBASIC3.6□□□□□ -1.83
CNTN3Q9P232 RNU6-57P-201ENST00000411348 103 ntBASIC3.6□□□□□ -1.83
CNTN3Q9P232 AC126124.2-201ENST00000413542 321 ntBASIC3.6□□□□□ -1.83
CNTN3Q9P232 AC008134.1-201ENST00000420943 193 ntBASIC3.6□□□□□ -1.83
CNTN3Q9P232 RPL23AP54-201ENST00000495129 419 ntBASIC3.6□□□□□ -1.83
CNTN3Q9P232 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.6□□□□□ -1.83
CNTN3Q9P232 MIR449C-201ENST00000516047 92 ntBASIC3.6□□□□□ -1.83
CNTN3Q9P232 RNU6-1234P-201ENST00000516877 103 ntBASIC3.6□□□□□ -1.83
CNTN3Q9P232 AC018630.3-201ENST00000542637 96 ntBASIC3.6□□□□□ -1.83
CNTN3Q9P232 AC002064.3-201ENST00000623448 346 ntBASIC3.6□□□□□ -1.83
CNTN3Q9P232 AC017071.1-201ENST00000564407 2204 ntBASIC3.6□□□□□ -1.83
CNTN3Q9P232 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.6□□□□□ -1.83
CNTN3Q9P232 ZNF702P-202ENST00000434269 1966 ntBASIC3.6□□□□□ -1.83
CNTN3Q9P232 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
CNTN3Q9P232 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CNTN3Q9P232 RNU6-1180P-201ENST00000364935 107 ntBASIC3.59□□□□□ -1.83
CNTN3Q9P232 RNU6-1274P-201ENST00000384557 107 ntBASIC3.59□□□□□ -1.83
CNTN3Q9P232 RN7SKP101-201ENST00000411376 320 ntBASIC3.59□□□□□ -1.83
CNTN3Q9P232 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.59□□□□□ -1.83
CNTN3Q9P232 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.59□□□□□ -1.83
CNTN3Q9P232 RPL23AP83-201ENST00000434984 473 ntBASIC3.59□□□□□ -1.83
CNTN3Q9P232 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.59□□□□□ -1.83
CNTN3Q9P232 RNU6-919P-201ENST00000516731 104 ntBASIC3.59□□□□□ -1.83
CNTN3Q9P232 RNU6-586P-201ENST00000517265 104 ntBASIC3.59□□□□□ -1.83
CNTN3Q9P232 AC107934.2-201ENST00000518653 310 ntBASIC3.59□□□□□ -1.83
CNTN3Q9P232 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.59□□□□□ -1.83
CNTN3Q9P232 AC093732.2-201ENST00000607950 274 ntBASIC3.59□□□□□ -1.83
CNTN3Q9P232 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.59□□□□□ -1.83
CNTN3Q9P232 CENPCP1-201ENST00000533085 2578 ntBASIC3.59□□□□□ -1.83
CNTN3Q9P232 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
CNTN3Q9P232 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
CNTN3Q9P232 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.84
CNTN3Q9P232 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CNTN3Q9P232 AL356292.1-201ENST00000283110 373 ntBASIC3.58□□□□□ -1.84
CNTN3Q9P232 RNU6-1235P-201ENST00000384559 107 ntBASIC3.58□□□□□ -1.84
CNTN3Q9P232 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC3.58□□□□□ -1.84
CNTN3Q9P232 SNRPGP8-201ENST00000454064 226 ntBASIC3.58□□□□□ -1.84
CNTN3Q9P232 AC016925.1-201ENST00000458303 298 ntBASIC3.58□□□□□ -1.84
CNTN3Q9P232 RNU6-498P-201ENST00000459468 107 ntBASIC3.58□□□□□ -1.84
CNTN3Q9P232 RNU2-34P-201ENST00000516534 121 ntBASIC3.58□□□□□ -1.84
CNTN3Q9P232 Y_RNA.686-201ENST00000516548 134 ntBASIC3.58□□□□□ -1.84
CNTN3Q9P232 SNORA70.24-201ENST00000517233 118 ntBASIC3.58□□□□□ -1.84
CNTN3Q9P232 MIR5680-201ENST00000577577 84 ntBASIC3.58□□□□□ -1.84
CNTN3Q9P232 MIR378D2-201ENST00000580636 98 ntBASIC3.58□□□□□ -1.84
CNTN3Q9P232 U7.2-201ENST00000607576 63 ntBASIC3.58□□□□□ -1.84
CNTN3Q9P232 5S_rRNA.13-201ENST00000622298 123 ntBASIC3.58□□□□□ -1.84
CNTN3Q9P232 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
CNTN3Q9P232 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.58□□□□□ -1.84
CNTN3Q9P232 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.58□□□□□ -1.84
CNTN3Q9P232 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.58□□□□□ -1.84
CNTN3Q9P232 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CNTN3Q9P232 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.57□□□□□ -1.84
CNTN3Q9P232 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CNTN3Q9P232 RNU1-70P-201ENST00000362618 164 ntBASIC3.57□□□□□ -1.84
CNTN3Q9P232 SNORD45.3-201ENST00000363836 72 ntBASIC3.57□□□□□ -1.84
CNTN3Q9P232 RNU6-944P-201ENST00000364023 107 ntBASIC3.57□□□□□ -1.84
CNTN3Q9P232 SNORD21-201ENST00000383953 95 ntBASIC3.57□□□□□ -1.84
CNTN3Q9P232 MIR491-201ENST00000384877 84 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 236.2 ms