Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.53□□□□□ -2.32
VAPAQ9P0L0 RNU6-1053P-201ENST00000515930 101 ntBASIC0.53□□□□□ -2.32
VAPAQ9P0L0 RNA5SP102-201ENST00000516865 106 ntBASIC0.53□□□□□ -2.32
VAPAQ9P0L0 RNU6-58P-201ENST00000517143 103 ntBASIC0.53□□□□□ -2.32
VAPAQ9P0L0 AP001372.4-201ENST00000524889 472 ntBASIC0.53□□□□□ -2.32
VAPAQ9P0L0 AC023157.2-201ENST00000540596 141 ntBASIC0.53□□□□□ -2.32
VAPAQ9P0L0 AK6P2-201ENST00000549020 471 ntBASIC0.53□□□□□ -2.32
VAPAQ9P0L0 AL118558.2-201ENST00000556294 238 ntBASIC0.53□□□□□ -2.32
VAPAQ9P0L0 CPDP1-201ENST00000579660 283 ntBASIC0.53□□□□□ -2.32
VAPAQ9P0L0 Z94722.1-201ENST00000604328 474 ntBASIC0.53□□□□□ -2.32
VAPAQ9P0L0 AC109347.2-201ENST00000610220 349 ntBASIC0.53□□□□□ -2.32
VAPAQ9P0L0 CASC19-280ENST00000642102 1351 ntBASIC0.53□□□□□ -2.32
VAPAQ9P0L0 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.52□□□□□ -2.33
VAPAQ9P0L0 Y_RNA.100-201ENST00000363141 102 ntBASIC0.52□□□□□ -2.33
VAPAQ9P0L0 Y_RNA.378-201ENST00000365652 113 ntBASIC0.52□□□□□ -2.33
VAPAQ9P0L0 Y_RNA.415-201ENST00000384012 112 ntBASIC0.52□□□□□ -2.33
VAPAQ9P0L0 RNU6-214P-201ENST00000384130 107 ntBASIC0.52□□□□□ -2.33
VAPAQ9P0L0 RNU6-110P-201ENST00000384508 104 ntBASIC0.52□□□□□ -2.33
VAPAQ9P0L0 MIR32-201ENST00000384965 70 ntBASIC0.52□□□□□ -2.33
VAPAQ9P0L0 FABP5P4-201ENST00000437203 171 ntBASIC0.52□□□□□ -2.33
VAPAQ9P0L0 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.52□□□□□ -2.33
VAPAQ9P0L0 LINC01399-202ENST00000458450 244 ntBASIC0.52□□□□□ -2.33
VAPAQ9P0L0 AL049830.1-201ENST00000468034 425 ntBASIC0.52□□□□□ -2.33
VAPAQ9P0L0 RPS27P22-201ENST00000478056 241 ntBASIC0.52□□□□□ -2.33
VAPAQ9P0L0 SNORA19.2-201ENST00000516013 114 ntBASIC0.52□□□□□ -2.33
VAPAQ9P0L0 RNU7-12P-201ENST00000516030 62 ntBASIC0.52□□□□□ -2.33
VAPAQ9P0L0 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.52□□□□□ -2.33
VAPAQ9P0L0 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.52□□□□□ -2.33
VAPAQ9P0L0 PRELID3BP2-201ENST00000605362 201 ntBASIC0.52□□□□□ -2.33
VAPAQ9P0L0 AC012557.2-201ENST00000605919 418 ntBASIC0.52□□□□□ -2.33
VAPAQ9P0L0 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
VAPAQ9P0L0 AL590002.1-201ENST00000406554 418 ntBASIC0.51□□□□□ -2.33
VAPAQ9P0L0 MTCO2P16-201ENST00000436962 677 ntBASIC0.51□□□□□ -2.33
VAPAQ9P0L0 USP9YP29-201ENST00000445112 563 ntBASIC0.51□□□□□ -2.33
VAPAQ9P0L0 MRPS10P1-201ENST00000448483 130 ntBASIC0.51□□□□□ -2.33
VAPAQ9P0L0 NDUFB4P10-201ENST00000452541 359 ntBASIC0.51□□□□□ -2.33
VAPAQ9P0L0 AL157398.1-201ENST00000452981 186 ntBASIC0.51□□□□□ -2.33
VAPAQ9P0L0 AC245047.8-201ENST00000456455 284 ntBASIC0.51□□□□□ -2.33
VAPAQ9P0L0 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.51□□□□□ -2.33
VAPAQ9P0L0 RNA5SP401-201ENST00000515920 127 ntBASIC0.51□□□□□ -2.33
VAPAQ9P0L0 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.51□□□□□ -2.33
VAPAQ9P0L0 MIR3124-201ENST00000582636 67 ntBASIC0.51□□□□□ -2.33
VAPAQ9P0L0 BNIP3P10-201ENST00000605360 577 ntBASIC0.51□□□□□ -2.33
VAPAQ9P0L0 AL096861.1-201ENST00000610899 123 ntBASIC0.51□□□□□ -2.33
VAPAQ9P0L0 MIR6079-201ENST00000635807 62 ntBASIC0.51□□□□□ -2.33
VAPAQ9P0L0 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
VAPAQ9P0L0 RNU6-137P-201ENST00000363680 108 ntBASIC0.5□□□□□ -2.33
VAPAQ9P0L0 Y_RNA.169-201ENST00000363745 96 ntBASIC0.5□□□□□ -2.33
VAPAQ9P0L0 RNU6-873P-201ENST00000363833 107 ntBASIC0.5□□□□□ -2.33
VAPAQ9P0L0 SNORA72.3-201ENST00000365074 132 ntBASIC0.5□□□□□ -2.33
VAPAQ9P0L0 RNU4-66P-201ENST00000365199 138 ntBASIC0.5□□□□□ -2.33
VAPAQ9P0L0 RNU6-1335P-201ENST00000365426 107 ntBASIC0.5□□□□□ -2.33
VAPAQ9P0L0 AC073464.1-201ENST00000429823 534 ntBASIC0.5□□□□□ -2.33
VAPAQ9P0L0 AL606489.2-201ENST00000433886 234 ntBASIC0.5□□□□□ -2.33
VAPAQ9P0L0 AC010469.2-201ENST00000496412 480 ntBASIC0.5□□□□□ -2.33
VAPAQ9P0L0 OR9P1P-201ENST00000496431 281 ntBASIC0.5□□□□□ -2.33
VAPAQ9P0L0 RNU6-415P-201ENST00000516252 97 ntBASIC0.5□□□□□ -2.33
VAPAQ9P0L0 RNU4-54P-201ENST00000516428 129 ntBASIC0.5□□□□□ -2.33
VAPAQ9P0L0 RN7SKP287-201ENST00000516546 266 ntBASIC0.5□□□□□ -2.33
VAPAQ9P0L0 RNU6-1332P-201ENST00000516666 104 ntBASIC0.5□□□□□ -2.33
VAPAQ9P0L0 RNU2-56P-201ENST00000516826 190 ntBASIC0.5□□□□□ -2.33
VAPAQ9P0L0 AC016957.1-201ENST00000534895 309 ntBASIC0.5□□□□□ -2.33
VAPAQ9P0L0 AC133485.1-201ENST00000567176 124 ntBASIC0.5□□□□□ -2.33
VAPAQ9P0L0 AC138907.6-201ENST00000568401 126 ntBASIC0.5□□□□□ -2.33
VAPAQ9P0L0 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC0.5□□□□□ -2.33
VAPAQ9P0L0 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC0.5□□□□□ -2.33
VAPAQ9P0L0 AC093424.1-201ENST00000604999 338 ntBASIC0.5□□□□□ -2.33
VAPAQ9P0L0 AC005592.1-201ENST00000566527 1640 ntBASIC0.49□□□□□ -2.33
VAPAQ9P0L0 MTND4P12-201ENST00000498999 1377 ntBASIC0.49□□□□□ -2.33
VAPAQ9P0L0 RNA5SP432-201ENST00000362480 116 ntBASIC0.49□□□□□ -2.33
VAPAQ9P0L0 RNY1P10-201ENST00000363268 113 ntBASIC0.49□□□□□ -2.33
VAPAQ9P0L0 SNORD115-8-201ENST00000363856 82 ntBASIC0.49□□□□□ -2.33
VAPAQ9P0L0 SNORD115-38-201ENST00000365037 82 ntBASIC0.49□□□□□ -2.33
VAPAQ9P0L0 MIR520E-201ENST00000384867 87 ntBASIC0.49□□□□□ -2.33
VAPAQ9P0L0 Z82188.1-201ENST00000436709 154 ntBASIC0.49□□□□□ -2.33
VAPAQ9P0L0 AL445567.1-201ENST00000439121 144 ntBASIC0.49□□□□□ -2.33
VAPAQ9P0L0 MTCO2P7-201ENST00000446518 666 ntBASIC0.49□□□□□ -2.33
VAPAQ9P0L0 SNORD65B-201ENST00000459126 73 ntBASIC0.49□□□□□ -2.33
VAPAQ9P0L0 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC0.49□□□□□ -2.33
VAPAQ9P0L0 RNU6-1198P-201ENST00000516904 67 ntBASIC0.49□□□□□ -2.33
VAPAQ9P0L0 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.49□□□□□ -2.33
VAPAQ9P0L0 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC0.49□□□□□ -2.33
VAPAQ9P0L0 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC0.49□□□□□ -2.33
VAPAQ9P0L0 AL603755.1-201ENST00000619504 163 ntBASIC0.49□□□□□ -2.33
VAPAQ9P0L0 AC006504.8-201ENST00000621046 635 ntBASIC0.49□□□□□ -2.33
VAPAQ9P0L0 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.49□□□□□ -2.33
VAPAQ9P0L0 SNORD50.1-201ENST00000362987 71 ntBASIC0.48□□□□□ -2.33
VAPAQ9P0L0 Y_RNA.319-201ENST00000365138 92 ntBASIC0.48□□□□□ -2.33
VAPAQ9P0L0 Y_RNA.330-201ENST00000365230 109 ntBASIC0.48□□□□□ -2.33
VAPAQ9P0L0 RNU6-38P-201ENST00000384085 107 ntBASIC0.48□□□□□ -2.33
VAPAQ9P0L0 AL353193.1-201ENST00000421444 268 ntBASIC0.48□□□□□ -2.33
VAPAQ9P0L0 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC0.48□□□□□ -2.33
VAPAQ9P0L0 MTCO2P19-201ENST00000427513 598 ntBASIC0.48□□□□□ -2.33
VAPAQ9P0L0 Y_RNA.638-201ENST00000459374 113 ntBASIC0.48□□□□□ -2.33
VAPAQ9P0L0 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.48□□□□□ -2.33
VAPAQ9P0L0 AC113410.1-201ENST00000505029 247 ntBASIC0.48□□□□□ -2.33
VAPAQ9P0L0 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC0.48□□□□□ -2.33
VAPAQ9P0L0 SNORD111.1-201ENST00000516421 86 ntBASIC0.48□□□□□ -2.33
VAPAQ9P0L0 RNA5SP121-201ENST00000516537 101 ntBASIC0.48□□□□□ -2.33
VAPAQ9P0L0 CYP3A137P-201ENST00000562436 69 ntBASIC0.48□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 174.8 ms