Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.82□□□□□ -1.96
KCMF1Q9P0J7 AC072026.1-201ENST00000605023 201 ntBASIC2.82□□□□□ -1.96
KCMF1Q9P0J7 snoZ196.1-201ENST00000625269 89 ntBASIC2.82□□□□□ -1.96
KCMF1Q9P0J7 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.82□□□□□ -1.96
KCMF1Q9P0J7 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
KCMF1Q9P0J7 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
KCMF1Q9P0J7 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
KCMF1Q9P0J7 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
KCMF1Q9P0J7 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.81□□□□□ -1.96
KCMF1Q9P0J7 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
KCMF1Q9P0J7 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.81□□□□□ -1.96
KCMF1Q9P0J7 RNU1-23P-201ENST00000363361 144 ntBASIC2.81□□□□□ -1.96
KCMF1Q9P0J7 RNU6-1048P-201ENST00000364054 107 ntBASIC2.81□□□□□ -1.96
KCMF1Q9P0J7 RNU6-418P-201ENST00000384035 107 ntBASIC2.81□□□□□ -1.96
KCMF1Q9P0J7 RNU6-975P-201ENST00000384296 105 ntBASIC2.81□□□□□ -1.96
KCMF1Q9P0J7 MIR181B1-201ENST00000385240 110 ntBASIC2.81□□□□□ -1.96
KCMF1Q9P0J7 SNORA26.5-201ENST00000391215 123 ntBASIC2.81□□□□□ -1.96
KCMF1Q9P0J7 HMGN2P18-201ENST00000450680 270 ntBASIC2.81□□□□□ -1.96
KCMF1Q9P0J7 RN7SL499P-201ENST00000481141 276 ntBASIC2.81□□□□□ -1.96
KCMF1Q9P0J7 RN7SL633P-201ENST00000488974 297 ntBASIC2.81□□□□□ -1.96
KCMF1Q9P0J7 AC074198.2-201ENST00000508153 258 ntBASIC2.81□□□□□ -1.96
KCMF1Q9P0J7 SNORA70.12-201ENST00000516084 153 ntBASIC2.81□□□□□ -1.96
KCMF1Q9P0J7 RNA5SP490-201ENST00000517141 136 ntBASIC2.81□□□□□ -1.96
KCMF1Q9P0J7 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.81□□□□□ -1.96
KCMF1Q9P0J7 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
KCMF1Q9P0J7 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.81□□□□□ -1.96
KCMF1Q9P0J7 AC022616.8-201ENST00000533569 253 ntBASIC2.81□□□□□ -1.96
KCMF1Q9P0J7 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.81□□□□□ -1.96
KCMF1Q9P0J7 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.81□□□□□ -1.96
KCMF1Q9P0J7 MIR4308-201ENST00000580634 81 ntBASIC2.81□□□□□ -1.96
KCMF1Q9P0J7 MIR6733-201ENST00000635723 61 ntBASIC2.81□□□□□ -1.96
KCMF1Q9P0J7 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
KCMF1Q9P0J7 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
KCMF1Q9P0J7 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
KCMF1Q9P0J7 AC138915.1-201ENST00000565427 1685 ntBASIC2.81□□□□□ -1.96
KCMF1Q9P0J7 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.81□□□□□ -1.96
KCMF1Q9P0J7 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
KCMF1Q9P0J7 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
KCMF1Q9P0J7 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
KCMF1Q9P0J7 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
KCMF1Q9P0J7 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.8□□□□□ -1.96
KCMF1Q9P0J7 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.8□□□□□ -1.96
KCMF1Q9P0J7 AC009487.2-201ENST00000420969 6821 ntBASIC2.8□□□□□ -1.96
KCMF1Q9P0J7 AC134026.1-201ENST00000623249 2239 ntBASIC2.8□□□□□ -1.96
KCMF1Q9P0J7 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
KCMF1Q9P0J7 RNU6-653P-201ENST00000363074 106 ntBASIC2.8□□□□□ -1.96
KCMF1Q9P0J7 Y_RNA.124-201ENST00000363339 93 ntBASIC2.8□□□□□ -1.96
KCMF1Q9P0J7 Y_RNA.233-201ENST00000364407 101 ntBASIC2.8□□□□□ -1.96
KCMF1Q9P0J7 Y_RNA.341-201ENST00000365341 102 ntBASIC2.8□□□□□ -1.96
KCMF1Q9P0J7 Y_RNA.361-201ENST00000365515 120 ntBASIC2.8□□□□□ -1.96
KCMF1Q9P0J7 RNU6-220P-201ENST00000390919 107 ntBASIC2.8□□□□□ -1.96
KCMF1Q9P0J7 AL355796.1-201ENST00000406706 323 ntBASIC2.8□□□□□ -1.96
KCMF1Q9P0J7 RN7SKP51-201ENST00000410781 304 ntBASIC2.8□□□□□ -1.96
KCMF1Q9P0J7 AC016925.1-201ENST00000458303 298 ntBASIC2.8□□□□□ -1.96
KCMF1Q9P0J7 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.8□□□□□ -1.96
KCMF1Q9P0J7 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.8□□□□□ -1.96
KCMF1Q9P0J7 SCARNA13-201ENST00000516672 275 ntBASIC2.8□□□□□ -1.96
KCMF1Q9P0J7 SNORA31.26-201ENST00000517250 137 ntBASIC2.8□□□□□ -1.96
KCMF1Q9P0J7 AC027419.1-201ENST00000522976 328 ntBASIC2.8□□□□□ -1.96
KCMF1Q9P0J7 MIR3684-201ENST00000579779 74 ntBASIC2.8□□□□□ -1.96
KCMF1Q9P0J7 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.8□□□□□ -1.96
KCMF1Q9P0J7 AC013412.1-201ENST00000610687 192 ntBASIC2.8□□□□□ -1.96
KCMF1Q9P0J7 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.8□□□□□ -1.96
KCMF1Q9P0J7 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
KCMF1Q9P0J7 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.8□□□□□ -1.96
KCMF1Q9P0J7 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
KCMF1Q9P0J7 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.79□□□□□ -1.96
KCMF1Q9P0J7 Y_RNA.287-201ENST00000364853 94 ntBASIC2.79□□□□□ -1.96
KCMF1Q9P0J7 SNORA20B-201ENST00000384220 132 ntBASIC2.79□□□□□ -1.96
KCMF1Q9P0J7 MIR95-201ENST00000385072 81 ntBASIC2.79□□□□□ -1.96
KCMF1Q9P0J7 SNORA26.7-201ENST00000391288 122 ntBASIC2.79□□□□□ -1.96
KCMF1Q9P0J7 MTCO2P33-201ENST00000402100 465 ntBASIC2.79□□□□□ -1.96
KCMF1Q9P0J7 AL357139.1-201ENST00000407792 426 ntBASIC2.79□□□□□ -1.96
KCMF1Q9P0J7 RNU2-63P-201ENST00000410792 194 ntBASIC2.79□□□□□ -1.96
KCMF1Q9P0J7 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.79□□□□□ -1.96
KCMF1Q9P0J7 AC104332.2-201ENST00000429959 156 ntBASIC2.79□□□□□ -1.96
KCMF1Q9P0J7 RNU6-221P-201ENST00000459541 99 ntBASIC2.79□□□□□ -1.96
KCMF1Q9P0J7 RNU6-948P-201ENST00000516374 107 ntBASIC2.79□□□□□ -1.96
KCMF1Q9P0J7 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.79□□□□□ -1.96
KCMF1Q9P0J7 AL137100.2-201ENST00000555786 315 ntBASIC2.79□□□□□ -1.96
KCMF1Q9P0J7 MIR5692C2-201ENST00000577959 77 ntBASIC2.79□□□□□ -1.96
KCMF1Q9P0J7 AL355297.2-201ENST00000604792 129 ntBASIC2.79□□□□□ -1.96
KCMF1Q9P0J7 AC025754.2-201ENST00000606491 432 ntBASIC2.79□□□□□ -1.96
KCMF1Q9P0J7 AC006386.2-201ENST00000624491 75 ntBASIC2.79□□□□□ -1.96
KCMF1Q9P0J7 AC012005.1-201ENST00000624575 75 ntBASIC2.79□□□□□ -1.96
KCMF1Q9P0J7 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.79□□□□□ -1.96
KCMF1Q9P0J7 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.79□□□□□ -1.96
KCMF1Q9P0J7 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.78□□□□□ -1.96
KCMF1Q9P0J7 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
KCMF1Q9P0J7 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
KCMF1Q9P0J7 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.78□□□□□ -1.96
KCMF1Q9P0J7 RNU6-461P-201ENST00000364195 107 ntBASIC2.78□□□□□ -1.96
KCMF1Q9P0J7 RNA5SP240-201ENST00000365355 128 ntBASIC2.78□□□□□ -1.96
KCMF1Q9P0J7 Y_RNA.368-201ENST00000365547 113 ntBASIC2.78□□□□□ -1.96
KCMF1Q9P0J7 U8.9-201ENST00000365667 134 ntBASIC2.78□□□□□ -1.96
KCMF1Q9P0J7 SNORA44-201ENST00000384584 132 ntBASIC2.78□□□□□ -1.96
KCMF1Q9P0J7 SNORA40.19-201ENST00000390846 128 ntBASIC2.78□□□□□ -1.96
KCMF1Q9P0J7 MIR548M-201ENST00000408260 86 ntBASIC2.78□□□□□ -1.96
KCMF1Q9P0J7 AL513477.1-202ENST00000417061 214 ntBASIC2.78□□□□□ -1.96
KCMF1Q9P0J7 COTL1P1-201ENST00000422309 375 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms