Protein–RNA interactions for Protein: Q9NXE4

SMPD4, Sphingomyelin phosphodiesterase 4, humanhuman

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4Q9NXE4 AC090525.1-201ENST00000479116 478 ntBASIC3.07□□□□□ -1.92
SMPD4Q9NXE4 AC103975.1-201ENST00000482506 483 ntBASIC3.07□□□□□ -1.92
SMPD4Q9NXE4 RPL23AP70-201ENST00000483361 460 ntBASIC3.07□□□□□ -1.92
SMPD4Q9NXE4 RNU6-772P-201ENST00000516042 105 ntBASIC3.07□□□□□ -1.92
SMPD4Q9NXE4 RNU6-844P-201ENST00000517175 102 ntBASIC3.07□□□□□ -1.92
SMPD4Q9NXE4 CKS1BP7-201ENST00000522230 235 ntBASIC3.07□□□□□ -1.92
SMPD4Q9NXE4 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC3.07□□□□□ -1.92
SMPD4Q9NXE4 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.07□□□□□ -1.92
SMPD4Q9NXE4 MIR3646-201ENST00000578301 84 ntBASIC3.07□□□□□ -1.92
SMPD4Q9NXE4 AC108081.1-201ENST00000604358 221 ntBASIC3.07□□□□□ -1.92
SMPD4Q9NXE4 AC099778.2-201ENST00000610904 211 ntBASIC3.07□□□□□ -1.92
SMPD4Q9NXE4 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.07□□□□□ -1.92
SMPD4Q9NXE4 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.07□□□□□ -1.92
SMPD4Q9NXE4 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.07□□□□□ -1.92
SMPD4Q9NXE4 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
SMPD4Q9NXE4 ADAM3A-203ENST00000461344 2157 ntBASIC3.07□□□□□ -1.92
SMPD4Q9NXE4 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SMPD4Q9NXE4 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
SMPD4Q9NXE4 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SMPD4Q9NXE4 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.06□□□□□ -1.92
SMPD4Q9NXE4 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
SMPD4Q9NXE4 RNU6-1082P-201ENST00000364574 107 ntBASIC3.06□□□□□ -1.92
SMPD4Q9NXE4 RNU6-1264P-201ENST00000383891 107 ntBASIC3.06□□□□□ -1.92
SMPD4Q9NXE4 SNORA18.3-201ENST00000384122 132 ntBASIC3.06□□□□□ -1.92
SMPD4Q9NXE4 Y_RNA.510-201ENST00000384511 114 ntBASIC3.06□□□□□ -1.92
SMPD4Q9NXE4 MIR526A2-201ENST00000390198 65 ntBASIC3.06□□□□□ -1.92
SMPD4Q9NXE4 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.06□□□□□ -1.92
SMPD4Q9NXE4 AL606845.1-201ENST00000404881 255 ntBASIC3.06□□□□□ -1.92
SMPD4Q9NXE4 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
SMPD4Q9NXE4 AC009969.1-201ENST00000438726 172 ntBASIC3.06□□□□□ -1.92
SMPD4Q9NXE4 RPL39P29-201ENST00000447779 157 ntBASIC3.06□□□□□ -1.92
SMPD4Q9NXE4 HSPE1P13-201ENST00000451143 297 ntBASIC3.06□□□□□ -1.92
SMPD4Q9NXE4 RNU7-141P-201ENST00000459304 62 ntBASIC3.06□□□□□ -1.92
SMPD4Q9NXE4 RPL31P41-201ENST00000477967 372 ntBASIC3.06□□□□□ -1.92
SMPD4Q9NXE4 AC083906.5-201ENST00000503722 328 ntBASIC3.06□□□□□ -1.92
SMPD4Q9NXE4 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.06□□□□□ -1.92
SMPD4Q9NXE4 AC091826.1-201ENST00000514065 313 ntBASIC3.06□□□□□ -1.92
SMPD4Q9NXE4 SNORD33.1-201ENST00000516213 88 ntBASIC3.06□□□□□ -1.92
SMPD4Q9NXE4 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.06□□□□□ -1.92
SMPD4Q9NXE4 MIR5582-201ENST00000579697 68 ntBASIC3.06□□□□□ -1.92
SMPD4Q9NXE4 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.06□□□□□ -1.92
SMPD4Q9NXE4 SNORD87-201ENST00000364849 89 ntBASIC3.05□□□□□ -1.92
SMPD4Q9NXE4 Y_RNA.368-201ENST00000365547 113 ntBASIC3.05□□□□□ -1.92
SMPD4Q9NXE4 Y_RNA.393-201ENST00000383936 102 ntBASIC3.05□□□□□ -1.92
SMPD4Q9NXE4 RNU6-622P-201ENST00000384272 103 ntBASIC3.05□□□□□ -1.92
SMPD4Q9NXE4 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.05□□□□□ -1.92
SMPD4Q9NXE4 Y_RNA.630-201ENST00000411370 108 ntBASIC3.05□□□□□ -1.92
SMPD4Q9NXE4 BPY2DP-201ENST00000422208 265 ntBASIC3.05□□□□□ -1.92
SMPD4Q9NXE4 UQCRHP3-201ENST00000451503 251 ntBASIC3.05□□□□□ -1.92
SMPD4Q9NXE4 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.05□□□□□ -1.92
SMPD4Q9NXE4 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.05□□□□□ -1.92
SMPD4Q9NXE4 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.05□□□□□ -1.92
SMPD4Q9NXE4 RNU6-581P-201ENST00000516214 105 ntBASIC3.05□□□□□ -1.92
SMPD4Q9NXE4 GTF3AP2-201ENST00000557014 266 ntBASIC3.05□□□□□ -1.92
SMPD4Q9NXE4 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
SMPD4Q9NXE4 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.04□□□□□ -1.92
SMPD4Q9NXE4 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
SMPD4Q9NXE4 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SMPD4Q9NXE4 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
SMPD4Q9NXE4 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SMPD4Q9NXE4 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.04□□□□□ -1.92
SMPD4Q9NXE4 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
SMPD4Q9NXE4 RNU6-884P-201ENST00000363889 107 ntBASIC3.04□□□□□ -1.92
SMPD4Q9NXE4 Y_RNA.310-201ENST00000365063 113 ntBASIC3.04□□□□□ -1.92
SMPD4Q9NXE4 RNU6-1336P-201ENST00000383886 109 ntBASIC3.04□□□□□ -1.92
SMPD4Q9NXE4 AL512604.1-201ENST00000404812 257 ntBASIC3.04□□□□□ -1.92
SMPD4Q9NXE4 RNA5SP274-201ENST00000410484 108 ntBASIC3.04□□□□□ -1.92
SMPD4Q9NXE4 RNA5SP504-201ENST00000410676 117 ntBASIC3.04□□□□□ -1.92
SMPD4Q9NXE4 HMGN2P30-201ENST00000423237 256 ntBASIC3.04□□□□□ -1.92
SMPD4Q9NXE4 AIMP1P2-201ENST00000425294 312 ntBASIC3.04□□□□□ -1.92
SMPD4Q9NXE4 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.04□□□□□ -1.92
SMPD4Q9NXE4 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.04□□□□□ -1.92
SMPD4Q9NXE4 RPS29P20-201ENST00000489592 171 ntBASIC3.04□□□□□ -1.92
SMPD4Q9NXE4 RPS27AP10-201ENST00000496103 208 ntBASIC3.04□□□□□ -1.92
SMPD4Q9NXE4 RNU6-107P-201ENST00000516643 102 ntBASIC3.04□□□□□ -1.92
SMPD4Q9NXE4 AC009163.5-201ENST00000575421 637 ntBASIC3.04□□□□□ -1.92
SMPD4Q9NXE4 AC090897.2-201ENST00000581715 130 ntBASIC3.04□□□□□ -1.92
SMPD4Q9NXE4 AL356575.1-201ENST00000603008 283 ntBASIC3.04□□□□□ -1.92
SMPD4Q9NXE4 SNORA50A-202ENST00000629536 136 ntBASIC3.04□□□□□ -1.92
SMPD4Q9NXE4 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.04□□□□□ -1.92
SMPD4Q9NXE4 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
SMPD4Q9NXE4 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
SMPD4Q9NXE4 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SMPD4Q9NXE4 CENPCP1-201ENST00000533085 2578 ntBASIC3.04□□□□□ -1.92
SMPD4Q9NXE4 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.03□□□□□ -1.92
SMPD4Q9NXE4 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
SMPD4Q9NXE4 RNU6-1164P-201ENST00000364428 107 ntBASIC3.03□□□□□ -1.92
SMPD4Q9NXE4 Y_RNA.243-201ENST00000364481 109 ntBASIC3.03□□□□□ -1.92
SMPD4Q9NXE4 Y_RNA.280-201ENST00000364765 112 ntBASIC3.03□□□□□ -1.92
SMPD4Q9NXE4 U8.7-201ENST00000364940 136 ntBASIC3.03□□□□□ -1.92
SMPD4Q9NXE4 Y_RNA.521-201ENST00000384560 114 ntBASIC3.03□□□□□ -1.92
SMPD4Q9NXE4 MIR208B-201ENST00000401172 77 ntBASIC3.03□□□□□ -1.92
SMPD4Q9NXE4 RNU6-855P-201ENST00000410395 104 ntBASIC3.03□□□□□ -1.92
SMPD4Q9NXE4 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.03□□□□□ -1.92
SMPD4Q9NXE4 AL714022.1-201ENST00000439897 151 ntBASIC3.03□□□□□ -1.92
SMPD4Q9NXE4 RPS27P1-201ENST00000450552 247 ntBASIC3.03□□□□□ -1.92
SMPD4Q9NXE4 RPL26P9-201ENST00000457466 433 ntBASIC3.03□□□□□ -1.92
SMPD4Q9NXE4 UBE2DNL-203ENST00000474922 222 ntBASIC3.03□□□□□ -1.92
SMPD4Q9NXE4 RN7SKP132-201ENST00000516001 208 ntBASIC3.03□□□□□ -1.92
SMPD4Q9NXE4 RNA5SP367-201ENST00000516557 118 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 466.2 ms